RNA–Protein interactions for RNA: ENSMUST00000102842.9

Rtn4-204, Transcript of Reticulon-4, mousemouse

TSL 1 (best) BASIC

Gene Rtn4, Length 2,257 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4-204ENSMUST00000102842 Gm11563B1AQ90 168 aa5.68□□□□□ -1.5
Rtn4-204ENSMUST00000102842 Gm11595B1AQA7 289 aa5.68□□□□□ -1.5
Rtn4-204ENSMUST00000102842 Krtap4-8B1AQA8 209 aa5.68□□□□□ -1.5
Rtn4-204ENSMUST00000102842 Krtap31-2Q8CAY5 177 aa5.67□□□□□ -1.5
Rtn4-204ENSMUST00000102842 Krtap4-7Q9D732 168 aa5.65□□□□□ -1.5
Rtn4-204ENSMUST00000102842 Krtap19-4Q925H7 84 aa5.55□□□□□ -1.52
Rtn4-204ENSMUST00000102842 Syne1Q6ZWR6 8799 aa5.53□□□□□ -1.52
Rtn4-204ENSMUST00000102842 Krtap4-9B1AQA9 244 aa5.53□□□□□ -1.52
Rtn4-204ENSMUST00000102842 Mt4P47945 62 aa5.53□□□□□ -1.52
Rtn4-204ENSMUST00000102842 Krtap31-1Q9D644 177 aa5.53□□□□□ -1.52
Rtn4-204ENSMUST00000102842 Lce3bQ9CQM7 98 aa5.51□□□□□ -1.53
Rtn4-204ENSMUST00000102842 Lce1fB9EJP6 147 aa5.49□□□□□ -1.53
Rtn4-204ENSMUST00000102842 Lce1a1Q9CQH5 143 aa5.49□□□□□ -1.53
Rtn4-204ENSMUST00000102842 Gm10100J3QK64 120 aa5.48□□□□□ -1.53
Rtn4-204ENSMUST00000102842 A030014E15RikA0A1Y7VJV2 120 aa5.46□□□□□ -1.54
Rtn4-204ENSMUST00000102842 A030003K21RikA0A1Y7VIM3 128 aa5.41□□□□□ -1.54
Rtn4-204ENSMUST00000102842 Gm38119A0A0A6YX29 146 aa5.37□□□□□ -1.55
Rtn4-204ENSMUST00000102842 Fsip2A2ARZ3 6995 aa5.37□□□□□ -1.55
Rtn4-204ENSMUST00000102842 Lce1bQ9D149 137 aa5.37□□□□□ -1.55
Rtn4-204ENSMUST00000102842 Gm10142J3KMP7 120 aa5.36□□□□□ -1.55
Rtn4-204ENSMUST00000102842 Krtap4-13Q9D7P3 165 aa5.34□□□□□ -1.55
Rtn4-204ENSMUST00000102842 Sprr2iO70560 76 aa5.34□□□□□ -1.56
Rtn4-204ENSMUST00000102842 2300003K06RikA2A4M0 262 aa5.23□□□□□ -1.57
Rtn4-204ENSMUST00000102842 Lce3cQ91V05 98 aa5.23□□□□□ -1.57
Rtn4-204ENSMUST00000102842 Sprr2kO70562 68 aa5.22□□□□□ -1.57
Rtn4-204ENSMUST00000102842 Lce3eF8VQJ0 98 aa5.21□□□□□ -1.58
Rtn4-204ENSMUST00000102842 Lce3fQ6PAI4 98 aa5.21□□□□□ -1.58
Rtn4-204ENSMUST00000102842 Lce3dE9Q8V1 98 aa5.19□□□□□ -1.58
Rtn4-204ENSMUST00000102842 Sprr2hO70559 108 aa5.19□□□□□ -1.58
Rtn4-204ENSMUST00000102842 Sprr2eO70556 76 aa5.13□□□□□ -1.59
Rtn4-204ENSMUST00000102842 Gm6217A0A1Y7VJK9 128 aa5.11□□□□□ -1.59
Rtn4-204ENSMUST00000102842 ObscnA2AAJ9 8891 aaKnown RBP5.11□□□□□ -1.59
Rtn4-204ENSMUST00000102842 Krtap6-3A0A087WQL6 57 aa5.05□□□□□ -1.6
Rtn4-204ENSMUST00000102842 Sprr2fO70557 76 aa5.04□□□□□ -1.6
Rtn4-204ENSMUST00000102842 Lce1lQ9D1G7 135 aa5.02□□□□□ -1.61
Rtn4-204ENSMUST00000102842 Lce3aQ497I5 98 aa4.98□□□□□ -1.61
Rtn4-204ENSMUST00000102842 A0A286YCP9 139 aa4.97□□□□□ -1.61
Rtn4-204ENSMUST00000102842 Mt1P02802 61 aaKnown RBP4.97□□□□□ -1.61
Rtn4-204ENSMUST00000102842 Lce1kJ3QP15 125 aa4.95□□□□□ -1.62
Rtn4-204ENSMUST00000102842 Krtap20-2E9Q0A8 60 aa4.8□□□□□ -1.64
Rtn4-204ENSMUST00000102842 Gm11568A2A4M2 211 aa4.77□□□□□ -1.65
Rtn4-204ENSMUST00000102842 Krtap9-1Q64526 186 aa4.77□□□□□ -1.65
Rtn4-204ENSMUST00000102842 Krtap5-2Q9D5Z7 189 aa4.7□□□□□ -1.66
Rtn4-204ENSMUST00000102842 Krtap4-16Q91W93 202 aa4.65□□□□□ -1.67
Rtn4-204ENSMUST00000102842 Gm10153A0A1B0GRL1 320 aa4.49□□□□□ -1.69
Rtn4-204ENSMUST00000102842 Gm11559Q9D3H7 191 aa4.47□□□□□ -1.69
Rtn4-204ENSMUST00000102842 Gm10024A0A0A0MQA4 119 aa4.39□□□□□ -1.71
Rtn4-204ENSMUST00000102842 Gm4553A0A1B0GSA9 284 aa4.39□□□□□ -1.71
Rtn4-204ENSMUST00000102842 Mt3P28184 68 aa4.37□□□□□ -1.71
Rtn4-204ENSMUST00000102842 Macf1Q9QXZ0 7354 aaKnown RBP4.37□□□□□ -1.71
Rtn4-204ENSMUST00000102842 Gm11554B1AQB2 190 aa4.35□□□□□ -1.71
Rtn4-204ENSMUST00000102842 Gm45337A0A1B0GS71 263 aa4.29□□□□□ -1.72
Rtn4-204ENSMUST00000102842 Gm2431E9Q8S1 172 aa4.28□□□□□ -1.72
Rtn4-204ENSMUST00000102842 Hmcn1D3YXG0 5634 aa4.22□□□□□ -1.73
Rtn4-204ENSMUST00000102842 Kmt2dQ6PDK2 5588 aa4.18□□□□□ -1.74
Rtn4-204ENSMUST00000102842 Gm40460A0A1B0GR10 244 aa4.15□□□□□ -1.75
Rtn4-204ENSMUST00000102842 Gm7579A0A1B0GRJ4 243 aa4.15□□□□□ -1.75
Rtn4-204ENSMUST00000102842 Krtap5-5Q2TA51 241 aa4.15□□□□□ -1.75
Rtn4-204ENSMUST00000102842 Krtap5-4Q62220 223 aa4.15□□□□□ -1.75
Rtn4-204ENSMUST00000102842 Muc16A0A140LJ72 8478 aa4.08□□□□□ -1.76
Rtn4-204ENSMUST00000102842 Eppk1Q8R0W0 6548 aa4□□□□□ -1.77
Rtn4-204ENSMUST00000102842 Gm39115A0A1B0GSH7 232 aa3.94□□□□□ -1.78
Rtn4-204ENSMUST00000102842 Gm45618A0A1B0GSA0 219 aa3.91□□□□□ -1.78
Rtn4-204ENSMUST00000102842 Muc19Q6PZE0 7524 aa3.83□□□□□ -1.8
Rtn4-204ENSMUST00000102842 Gm11639A0A1D5RLM8 5808 aa3.81□□□□□ -1.8
Rtn4-204ENSMUST00000102842 1110025L11RikO09048 78 aa3.81□□□□□ -1.8
Rtn4-204ENSMUST00000102842 Krtap6-5Q925H3 78 aa3.81□□□□□ -1.8
Rtn4-204ENSMUST00000102842 DstQ91ZU6 7393 aaKnown RBP3.78□□□□□ -1.8
Rtn4-204ENSMUST00000102842 AhnakE9Q616 5656 aaKnown RBP3.58□□□□□ -1.84
Rtn4-204ENSMUST00000102842 Gpr98Q8VHN7 6298 aaKnown RBP3.49□□□□□ -1.85
Rtn4-204ENSMUST00000102842 NebE9Q1W3 7152 aa3.49□□□□□ -1.85
Rtn4-204ENSMUST00000102842 Gm29735A0A1B0GT06 219 aa3.45□□□□□ -1.86
Rtn4-204ENSMUST00000102842 Sprr2bO70554 98 aa3.45□□□□□ -1.86
Rtn4-204ENSMUST00000102842 Gm10229O08631 77 aa3.36□□□□□ -1.87
Rtn4-204ENSMUST00000102842 Gm11567Q9D141 195 aa3.33□□□□□ -1.88
Rtn4-204ENSMUST00000102842 Krtap21-1Q925H4 128 aa3.14□□□□□ -1.91
Rtn4-204ENSMUST00000102842 Phgr1Q8K0G7 91 aa3.05□□□□□ -1.92
Rtn4-204ENSMUST00000102842 Krtap6-2O08884 159 aa2.82□□□□□ -1.96
Rtn4-204ENSMUST00000102842 Krtap5-1Q64507 230 aa2.65□□□□□ -1.99
Rtn4-204ENSMUST00000102842 Gm4559A4IF42 199 aa2.58□□□□□ -2
Retrieved 80 of 22,080 RNA–protein pairs in 110 ms