RNA–Protein interactions for RNA: ENSMUST00000053287.5

Usp42-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp42, Length 5,151 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42-201ENSMUST00000053287 Gm11569B1AQB1 180 aa4.15□□□□□ -1.75
Usp42-201ENSMUST00000053287 Krtap4-16Q91W93 202 aa4.14□□□□□ -1.75
Usp42-201ENSMUST00000053287 A0A1Y7VJH8 109 aa4.13□□□□□ -1.75
Usp42-201ENSMUST00000053287 A030003K21RikA0A1Y7VIM3 128 aa4.06□□□□□ -1.76
Usp42-201ENSMUST00000053287 Krtap28-10A0A1Y7VP58 119 aa4.03□□□□□ -1.76
Usp42-201ENSMUST00000053287 Mdn1A2ANY6 5589 aaKnown RBP4□□□□□ -1.77
Usp42-201ENSMUST00000053287 2300003K06RikA2A4M0 262 aa3.99□□□□□ -1.77
Usp42-201ENSMUST00000053287 Gm10024A0A0A0MQA4 119 aa3.98□□□□□ -1.77
Usp42-201ENSMUST00000053287 Krtap28-13A0A087WQP5 138 aa3.97□□□□□ -1.77
Usp42-201ENSMUST00000053287 Gm38119A0A0A6YX29 146 aa3.95□□□□□ -1.78
Usp42-201ENSMUST00000053287 Lce1gQ9D195 139 aa3.95□□□□□ -1.78
Usp42-201ENSMUST00000053287 A030005K14RikA0A1Y7VNY1 122 aa3.93□□□□□ -1.78
Usp42-201ENSMUST00000053287 Lce1lQ9D1G7 135 aa3.92□□□□□ -1.78
Usp42-201ENSMUST00000053287 Syne1Q6ZWR6 8799 aa3.89□□□□□ -1.79
Usp42-201ENSMUST00000053287 Lce1bQ9D149 137 aa3.88□□□□□ -1.79
Usp42-201ENSMUST00000053287 A0A1Y7VJ07 166 aa3.86□□□□□ -1.79
Usp42-201ENSMUST00000053287 Gm6217A0A1Y7VJK9 128 aa3.82□□□□□ -1.8
Usp42-201ENSMUST00000053287 Krtap4-6Q3V4B7 195 aa3.77□□□□□ -1.81
Usp42-201ENSMUST00000053287 Mt1P02802 61 aaKnown RBP3.74□□□□□ -1.81
Usp42-201ENSMUST00000053287 Gm7544A0A1Y7VJ58 118 aa3.72□□□□□ -1.81
Usp42-201ENSMUST00000053287 Mt4P47945 62 aa3.72□□□□□ -1.81
Usp42-201ENSMUST00000053287 ObscnA2AAJ9 8891 aaKnown RBP3.69□□□□□ -1.82
Usp42-201ENSMUST00000053287 A030005L19RikA0A1Y7VIU2 113 aa3.68□□□□□ -1.82
Usp42-201ENSMUST00000053287 Krtap31-2Q8CAY5 177 aa3.67□□□□□ -1.82
Usp42-201ENSMUST00000053287 Krtap4-1Q3UUY3 169 aa3.66□□□□□ -1.82
Usp42-201ENSMUST00000053287 Lce1kJ3QP15 125 aa3.64□□□□□ -1.83
Usp42-201ENSMUST00000053287 Krtap4-2B1AQ85 167 aa3.59□□□□□ -1.84
Usp42-201ENSMUST00000053287 A030014E15RikA0A1Y7VJV2 120 aa3.54□□□□□ -1.84
Usp42-201ENSMUST00000053287 Gm11564A2A4L9 201 aa3.51□□□□□ -1.85
Usp42-201ENSMUST00000053287 Gm11563B1AQ90 168 aa3.51□□□□□ -1.85
Usp42-201ENSMUST00000053287 Gm11595B1AQA7 289 aa3.51□□□□□ -1.85
Usp42-201ENSMUST00000053287 Krtap4-8B1AQA8 209 aa3.51□□□□□ -1.85
Usp42-201ENSMUST00000053287 Krtap4-9B1AQA9 244 aa3.46□□□□□ -1.86
Usp42-201ENSMUST00000053287 Syne2Q6ZWQ0 6874 aaKnown RBP3.43□□□□□ -1.86
Usp42-201ENSMUST00000053287 Gm11596B1AQB0 205 aa3.42□□□□□ -1.86
Usp42-201ENSMUST00000053287 Fsip2A2ARZ3 6995 aa3.42□□□□□ -1.86
Usp42-201ENSMUST00000053287 Mt3P28184 68 aa3.41□□□□□ -1.86
Usp42-201ENSMUST00000053287 Krtap4-13Q9D7P3 165 aa3.37□□□□□ -1.87
Usp42-201ENSMUST00000053287 Krtap4-7Q9D732 168 aa3.35□□□□□ -1.87
Usp42-201ENSMUST00000053287 Gm11555B1AQ89 175 aa3.29□□□□□ -1.88
Usp42-201ENSMUST00000053287 Gm11568A2A4M2 211 aa3.21□□□□□ -1.9
Usp42-201ENSMUST00000053287 Krtap9-1Q64526 186 aa3.21□□□□□ -1.9
Usp42-201ENSMUST00000053287 Krtap20-2E9Q0A8 60 aa3.18□□□□□ -1.9
Usp42-201ENSMUST00000053287 Krtap6-3A0A087WQL6 57 aa3.1□□□□□ -1.91
Usp42-201ENSMUST00000053287 Sprr2bO70554 98 aa3.07□□□□□ -1.92
Usp42-201ENSMUST00000053287 Muc16A0A140LJ72 8478 aa3.06□□□□□ -1.92
Usp42-201ENSMUST00000053287 1110025L11RikO09048 78 aa2.99□□□□□ -1.93
Usp42-201ENSMUST00000053287 Krtap6-5Q925H3 78 aa2.99□□□□□ -1.93
Usp42-201ENSMUST00000053287 A0A286YCP9 139 aa2.96□□□□□ -1.94
Usp42-201ENSMUST00000053287 Krtap5-2Q9D5Z7 189 aa2.92□□□□□ -1.94
Usp42-201ENSMUST00000053287 Gm10153A0A1B0GRL1 320 aa2.9□□□□□ -1.95
Usp42-201ENSMUST00000053287 Hmcn1D3YXG0 5634 aa2.83□□□□□ -1.96
Usp42-201ENSMUST00000053287 Macf1Q9QXZ0 7354 aaKnown RBP2.79□□□□□ -1.96
Usp42-201ENSMUST00000053287 Gm11554B1AQB2 190 aa2.78□□□□□ -1.96
Usp42-201ENSMUST00000053287 Eppk1Q8R0W0 6548 aa2.68□□□□□ -1.98
Usp42-201ENSMUST00000053287 Gm10229O08631 77 aa2.68□□□□□ -1.98
Usp42-201ENSMUST00000053287 Phgr1Q8K0G7 91 aa2.66□□□□□ -1.98
Usp42-201ENSMUST00000053287 Gm11559Q9D3H7 191 aa2.64□□□□□ -1.99
Usp42-201ENSMUST00000053287 Kmt2dQ6PDK2 5588 aa2.64□□□□□ -1.99
Usp42-201ENSMUST00000053287 Gm4553A0A1B0GSA9 284 aa2.58□□□□□ -2
Usp42-201ENSMUST00000053287 Gm45337A0A1B0GS71 263 aa2.58□□□□□ -2
Usp42-201ENSMUST00000053287 Gm40460A0A1B0GR10 244 aa2.52□□□□□ -2.01
Usp42-201ENSMUST00000053287 Gm7579A0A1B0GRJ4 243 aa2.52□□□□□ -2.01
Usp42-201ENSMUST00000053287 Gm2431E9Q8S1 172 aa2.52□□□□□ -2.01
Usp42-201ENSMUST00000053287 Krtap5-5Q2TA51 241 aa2.52□□□□□ -2.01
Usp42-201ENSMUST00000053287 Krtap5-4Q62220 223 aa2.52□□□□□ -2.01
Usp42-201ENSMUST00000053287 DstQ91ZU6 7393 aaKnown RBP2.5□□□□□ -2.01
Usp42-201ENSMUST00000053287 NebE9Q1W3 7152 aa2.5□□□□□ -2.01
Usp42-201ENSMUST00000053287 Muc19Q6PZE0 7524 aa2.49□□□□□ -2.01
Usp42-201ENSMUST00000053287 Krtap21-1Q925H4 128 aa2.39□□□□□ -2.03
Usp42-201ENSMUST00000053287 AhnakE9Q616 5656 aaKnown RBP2.28□□□□□ -2.04
Usp42-201ENSMUST00000053287 Gm11639A0A1D5RLM8 5808 aa2.2□□□□□ -2.06
Usp42-201ENSMUST00000053287 Gm39115A0A1B0GSH7 232 aa2.19□□□□□ -2.06
Usp42-201ENSMUST00000053287 Gm11567Q9D141 195 aa2.17□□□□□ -2.06
Usp42-201ENSMUST00000053287 Krtap6-2O08884 159 aa2.16□□□□□ -2.06
Usp42-201ENSMUST00000053287 Gpr98Q8VHN7 6298 aaKnown RBP2.14□□□□□ -2.07
Usp42-201ENSMUST00000053287 Gm29735A0A1B0GT06 219 aa1.95□□□□□ -2.1
Usp42-201ENSMUST00000053287 Gm45618A0A1B0GSA0 219 aa1.91□□□□□ -2.1
Usp42-201ENSMUST00000053287 Krtap5-1Q64507 230 aa1.41□□□□□ -2.18
Usp42-201ENSMUST00000053287 Gm4559A4IF42 199 aa1.16□□□□□ -2.22
Retrieved 80 of 22,080 RNA–protein pairs in 107.9 ms