RNA–Protein interactions for RNA: ENSMUST00000051594.11

Depdc1b-201, Transcript of DEP domain-containing protein 1B, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Depdc1b, Length 2,563 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1b-201ENSMUST00000051594 Sprr2iO70560 76 aa4.62□□□□□ -1.67
Depdc1b-201ENSMUST00000051594 Lce1a1Q9CQH5 143 aa4.62□□□□□ -1.67
Depdc1b-201ENSMUST00000051594 Krtap19-4Q925H7 84 aa4.59□□□□□ -1.68
Depdc1b-201ENSMUST00000051594 Lce3bQ9CQM7 98 aa4.58□□□□□ -1.68
Depdc1b-201ENSMUST00000051594 Gm10142J3KMP7 120 aa4.58□□□□□ -1.68
Depdc1b-201ENSMUST00000051594 Gm11564A2A4L9 201 aa4.55□□□□□ -1.68
Depdc1b-201ENSMUST00000051594 Gm11595B1AQA7 289 aa4.55□□□□□ -1.68
Depdc1b-201ENSMUST00000051594 Krtap4-8B1AQA8 209 aa4.55□□□□□ -1.68
Depdc1b-201ENSMUST00000051594 A0A1Y7VLE6 161 aa4.53□□□□□ -1.68
Depdc1b-201ENSMUST00000051594 A030005K14RikA0A1Y7VNY1 122 aa4.44□□□□□ -1.7
Depdc1b-201ENSMUST00000051594 Lce3cQ91V05 98 aa4.43□□□□□ -1.7
Depdc1b-201ENSMUST00000051594 Krtap4-9B1AQA9 244 aa4.42□□□□□ -1.7
Depdc1b-201ENSMUST00000051594 Sprr2hO70559 108 aa4.42□□□□□ -1.7
Depdc1b-201ENSMUST00000051594 Lce3dE9Q8V1 98 aa4.41□□□□□ -1.7
Depdc1b-201ENSMUST00000051594 Sprr2eO70556 76 aa4.38□□□□□ -1.71
Depdc1b-201ENSMUST00000051594 Fsip2A2ARZ3 6995 aa4.38□□□□□ -1.71
Depdc1b-201ENSMUST00000051594 Sprr2fO70557 76 aa4.38□□□□□ -1.71
Depdc1b-201ENSMUST00000051594 Krtap31-1Q9D644 177 aa4.36□□□□□ -1.71
Depdc1b-201ENSMUST00000051594 Krtap28-13A0A087WQP5 138 aa4.35□□□□□ -1.71
Depdc1b-201ENSMUST00000051594 Mt4P47945 62 aa4.35□□□□□ -1.71
Depdc1b-201ENSMUST00000051594 Syne1Q6ZWR6 8799 aa4.32□□□□□ -1.72
Depdc1b-201ENSMUST00000051594 Lce3eF8VQJ0 98 aa4.32□□□□□ -1.72
Depdc1b-201ENSMUST00000051594 Lce3fQ6PAI4 98 aa4.32□□□□□ -1.72
Depdc1b-201ENSMUST00000051594 Lce1bQ9D149 137 aa4.3□□□□□ -1.72
Depdc1b-201ENSMUST00000051594 Gm38119A0A0A6YX29 146 aa4.29□□□□□ -1.72
Depdc1b-201ENSMUST00000051594 Sprr2kO70562 68 aa4.27□□□□□ -1.73
Depdc1b-201ENSMUST00000051594 Krtap4-13Q9D7P3 165 aa4.27□□□□□ -1.73
Depdc1b-201ENSMUST00000051594 2300003K06RikA2A4M0 262 aa4.27□□□□□ -1.73
Depdc1b-201ENSMUST00000051594 Lce3aQ497I5 98 aa4.25□□□□□ -1.73
Depdc1b-201ENSMUST00000051594 Krtap6-3A0A087WQL6 57 aa4.14□□□□□ -1.75
Depdc1b-201ENSMUST00000051594 ObscnA2AAJ9 8891 aaKnown RBP4.11□□□□□ -1.75
Depdc1b-201ENSMUST00000051594 Krtap4-16Q91W93 202 aa4.1□□□□□ -1.75
Depdc1b-201ENSMUST00000051594 A0A286YCP9 139 aa4.08□□□□□ -1.76
Depdc1b-201ENSMUST00000051594 A030003K21RikA0A1Y7VIM3 128 aa4.07□□□□□ -1.76
Depdc1b-201ENSMUST00000051594 Gm6217A0A1Y7VJK9 128 aa4.07□□□□□ -1.76
Depdc1b-201ENSMUST00000051594 Lce1lQ9D1G7 135 aa4.07□□□□□ -1.76
Depdc1b-201ENSMUST00000051594 Lce1kJ3QP15 125 aa3.95□□□□□ -1.78
Depdc1b-201ENSMUST00000051594 Mt1P02802 61 aaKnown RBP3.87□□□□□ -1.79
Depdc1b-201ENSMUST00000051594 Gm11559Q9D3H7 191 aa3.85□□□□□ -1.79
Depdc1b-201ENSMUST00000051594 Gm11568A2A4M2 211 aa3.82□□□□□ -1.8
Depdc1b-201ENSMUST00000051594 Krtap20-2E9Q0A8 60 aa3.82□□□□□ -1.8
Depdc1b-201ENSMUST00000051594 Krtap9-1Q64526 186 aa3.82□□□□□ -1.8
Depdc1b-201ENSMUST00000051594 Krtap5-2Q9D5Z7 189 aa3.78□□□□□ -1.8
Depdc1b-201ENSMUST00000051594 Gm10024A0A0A0MQA4 119 aa3.64□□□□□ -1.83
Depdc1b-201ENSMUST00000051594 Gm10153A0A1B0GRL1 320 aa3.59□□□□□ -1.83
Depdc1b-201ENSMUST00000051594 A0A1Y7VJ07 166 aa3.59□□□□□ -1.83
Depdc1b-201ENSMUST00000051594 Macf1Q9QXZ0 7354 aaKnown RBP3.53□□□□□ -1.84
Depdc1b-201ENSMUST00000051594 Gm11554B1AQB2 190 aa3.51□□□□□ -1.85
Depdc1b-201ENSMUST00000051594 Eppk1Q8R0W0 6548 aa3.5□□□□□ -1.85
Depdc1b-201ENSMUST00000051594 Gm4553A0A1B0GSA9 284 aa3.49□□□□□ -1.85
Depdc1b-201ENSMUST00000051594 Muc16A0A140LJ72 8478 aa3.46□□□□□ -1.86
Depdc1b-201ENSMUST00000051594 Gm45337A0A1B0GS71 263 aa3.45□□□□□ -1.86
Depdc1b-201ENSMUST00000051594 Mt3P28184 68 aa3.45□□□□□ -1.86
Depdc1b-201ENSMUST00000051594 Hmcn1D3YXG0 5634 aa3.4□□□□□ -1.86
Depdc1b-201ENSMUST00000051594 Gm2431E9Q8S1 172 aa3.39□□□□□ -1.87
Depdc1b-201ENSMUST00000051594 Kmt2dQ6PDK2 5588 aa3.36□□□□□ -1.87
Depdc1b-201ENSMUST00000051594 Gm40460A0A1B0GR10 244 aa3.35□□□□□ -1.87
Depdc1b-201ENSMUST00000051594 Gm7579A0A1B0GRJ4 243 aa3.35□□□□□ -1.87
Depdc1b-201ENSMUST00000051594 A030014E15RikA0A1Y7VJV2 120 aa3.35□□□□□ -1.87
Depdc1b-201ENSMUST00000051594 Krtap5-5Q2TA51 241 aa3.35□□□□□ -1.87
Depdc1b-201ENSMUST00000051594 Krtap5-4Q62220 223 aa3.35□□□□□ -1.87
Depdc1b-201ENSMUST00000051594 Gm11639A0A1D5RLM8 5808 aa3.31□□□□□ -1.88
Depdc1b-201ENSMUST00000051594 Muc19Q6PZE0 7524 aa3.28□□□□□ -1.88
Depdc1b-201ENSMUST00000051594 Gpr98Q8VHN7 6298 aaKnown RBP3.12□□□□□ -1.91
Depdc1b-201ENSMUST00000051594 Gm39115A0A1B0GSH7 232 aa3.11□□□□□ -1.91
Depdc1b-201ENSMUST00000051594 DstQ91ZU6 7393 aaKnown RBP3.11□□□□□ -1.91
Depdc1b-201ENSMUST00000051594 NebE9Q1W3 7152 aa3.01□□□□□ -1.93
Depdc1b-201ENSMUST00000051594 1110025L11RikO09048 78 aa2.98□□□□□ -1.93
Depdc1b-201ENSMUST00000051594 Krtap6-5Q925H3 78 aa2.98□□□□□ -1.93
Depdc1b-201ENSMUST00000051594 Sprr2bO70554 98 aa2.86□□□□□ -1.95
Depdc1b-201ENSMUST00000051594 AhnakE9Q616 5656 aaKnown RBP2.86□□□□□ -1.95
Depdc1b-201ENSMUST00000051594 Gm45618A0A1B0GSA0 219 aa2.85□□□□□ -1.95
Depdc1b-201ENSMUST00000051594 Gm10229O08631 77 aa2.61□□□□□ -1.99
Depdc1b-201ENSMUST00000051594 Phgr1Q8K0G7 91 aa2.58□□□□□ -2
Depdc1b-201ENSMUST00000051594 Gm11567Q9D141 195 aa2.54□□□□□ -2
Depdc1b-201ENSMUST00000051594 Gm29735A0A1B0GT06 219 aa2.53□□□□□ -2.01
Depdc1b-201ENSMUST00000051594 Krtap21-1Q925H4 128 aa2.48□□□□□ -2.01
Depdc1b-201ENSMUST00000051594 Krtap6-2O08884 159 aa2.21□□□□□ -2.06
Depdc1b-201ENSMUST00000051594 Krtap5-1Q64507 230 aa1.92□□□□□ -2.1
Depdc1b-201ENSMUST00000051594 Gm4559A4IF42 199 aa1.79□□□□□ -2.12
Retrieved 80 of 22,080 RNA–protein pairs in 21.2 ms