RNA–Protein interactions for RNA: ENSMUST00000045956.13

Cchcr1-201, Transcript of Coiled-coil alpha-helical rod protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Cchcr1, Length 2,748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1-201ENSMUST00000045956 Krtap4-2B1AQ85 167 aa4.42□□□□□ -1.7
Cchcr1-201ENSMUST00000045956 Lce3eF8VQJ0 98 aa4.41□□□□□ -1.7
Cchcr1-201ENSMUST00000045956 Lce3fQ6PAI4 98 aa4.41□□□□□ -1.7
Cchcr1-201ENSMUST00000045956 Fsip2A2ARZ3 6995 aa4.39□□□□□ -1.71
Cchcr1-201ENSMUST00000045956 Gm11596B1AQB0 205 aa4.38□□□□□ -1.71
Cchcr1-201ENSMUST00000045956 Krtap31-2Q8CAY5 177 aa4.38□□□□□ -1.71
Cchcr1-201ENSMUST00000045956 Mt4P47945 62 aa4.38□□□□□ -1.71
Cchcr1-201ENSMUST00000045956 Gm38119A0A0A6YX29 146 aa4.37□□□□□ -1.71
Cchcr1-201ENSMUST00000045956 Syne2Q6ZWQ0 6874 aaKnown RBP4.37□□□□□ -1.71
Cchcr1-201ENSMUST00000045956 Gm11564A2A4L9 201 aa4.37□□□□□ -1.71
Cchcr1-201ENSMUST00000045956 Gm11563B1AQ90 168 aa4.37□□□□□ -1.71
Cchcr1-201ENSMUST00000045956 Gm11595B1AQA7 289 aa4.37□□□□□ -1.71
Cchcr1-201ENSMUST00000045956 Krtap4-8B1AQA8 209 aa4.37□□□□□ -1.71
Cchcr1-201ENSMUST00000045956 Sprr2eO70556 76 aa4.35□□□□□ -1.71
Cchcr1-201ENSMUST00000045956 Lce3aQ497I5 98 aa4.33□□□□□ -1.72
Cchcr1-201ENSMUST00000045956 Sprr2fO70557 76 aa4.3□□□□□ -1.72
Cchcr1-201ENSMUST00000045956 Krtap4-9B1AQA9 244 aa4.29□□□□□ -1.72
Cchcr1-201ENSMUST00000045956 ObscnA2AAJ9 8891 aaKnown RBP4.28□□□□□ -1.72
Cchcr1-201ENSMUST00000045956 Lce1bQ9D149 137 aa4.26□□□□□ -1.73
Cchcr1-201ENSMUST00000045956 2300003K06RikA2A4M0 262 aa4.25□□□□□ -1.73
Cchcr1-201ENSMUST00000045956 Sprr2kO70562 68 aa4.25□□□□□ -1.73
Cchcr1-201ENSMUST00000045956 Krtap4-13Q9D7P3 165 aa4.15□□□□□ -1.75
Cchcr1-201ENSMUST00000045956 Krtap4-16Q91W93 202 aa4.08□□□□□ -1.76
Cchcr1-201ENSMUST00000045956 Lce1kJ3QP15 125 aa4.05□□□□□ -1.76
Cchcr1-201ENSMUST00000045956 Lce1lQ9D1G7 135 aa4.04□□□□□ -1.76
Cchcr1-201ENSMUST00000045956 Mt1P02802 61 aaKnown RBP4.02□□□□□ -1.77
Cchcr1-201ENSMUST00000045956 Krtap4-7Q9D732 168 aa4□□□□□ -1.77
Cchcr1-201ENSMUST00000045956 Krtap6-3A0A087WQL6 57 aa3.9□□□□□ -1.78
Cchcr1-201ENSMUST00000045956 Gm11568A2A4M2 211 aa3.87□□□□□ -1.79
Cchcr1-201ENSMUST00000045956 Krtap9-1Q64526 186 aa3.87□□□□□ -1.79
Cchcr1-201ENSMUST00000045956 A0A1Y7VJH8 109 aa3.85□□□□□ -1.79
Cchcr1-201ENSMUST00000045956 Krtap20-2E9Q0A8 60 aa3.84□□□□□ -1.8
Cchcr1-201ENSMUST00000045956 Gm10024A0A0A0MQA4 119 aa3.79□□□□□ -1.8
Cchcr1-201ENSMUST00000045956 Krtap5-2Q9D5Z7 189 aa3.74□□□□□ -1.81
Cchcr1-201ENSMUST00000045956 Muc16A0A140LJ72 8478 aa3.71□□□□□ -1.82
Cchcr1-201ENSMUST00000045956 Macf1Q9QXZ0 7354 aaKnown RBP3.7□□□□□ -1.82
Cchcr1-201ENSMUST00000045956 Gm10153A0A1B0GRL1 320 aa3.62□□□□□ -1.83
Cchcr1-201ENSMUST00000045956 Mt3P28184 68 aa3.55□□□□□ -1.84
Cchcr1-201ENSMUST00000045956 A0A1Y7VLE6 161 aa3.52□□□□□ -1.85
Cchcr1-201ENSMUST00000045956 Hmcn1D3YXG0 5634 aa3.51□□□□□ -1.85
Cchcr1-201ENSMUST00000045956 Kmt2dQ6PDK2 5588 aa3.48□□□□□ -1.85
Cchcr1-201ENSMUST00000045956 Gm4553A0A1B0GSA9 284 aa3.45□□□□□ -1.86
Cchcr1-201ENSMUST00000045956 Gm45337A0A1B0GS71 263 aa3.4□□□□□ -1.86
Cchcr1-201ENSMUST00000045956 Gm11559Q9D3H7 191 aa3.4□□□□□ -1.86
Cchcr1-201ENSMUST00000045956 A030005L19RikA0A1Y7VIU2 113 aa3.38□□□□□ -1.87
Cchcr1-201ENSMUST00000045956 Gm11554B1AQB2 190 aa3.36□□□□□ -1.87
Cchcr1-201ENSMUST00000045956 Gm2431E9Q8S1 172 aa3.34□□□□□ -1.88
Cchcr1-201ENSMUST00000045956 Gm40460A0A1B0GR10 244 aa3.33□□□□□ -1.88
Cchcr1-201ENSMUST00000045956 Gm7579A0A1B0GRJ4 243 aa3.33□□□□□ -1.88
Cchcr1-201ENSMUST00000045956 Krtap5-5Q2TA51 241 aa3.33□□□□□ -1.88
Cchcr1-201ENSMUST00000045956 Krtap5-4Q62220 223 aa3.33□□□□□ -1.88
Cchcr1-201ENSMUST00000045956 Gm39115A0A1B0GSH7 232 aa3.18□□□□□ -1.9
Cchcr1-201ENSMUST00000045956 Muc19Q6PZE0 7524 aa3.14□□□□□ -1.91
Cchcr1-201ENSMUST00000045956 Eppk1Q8R0W0 6548 aa3.14□□□□□ -1.91
Cchcr1-201ENSMUST00000045956 1110025L11RikO09048 78 aa3.13□□□□□ -1.91
Cchcr1-201ENSMUST00000045956 Krtap6-5Q925H3 78 aa3.13□□□□□ -1.91
Cchcr1-201ENSMUST00000045956 DstQ91ZU6 7393 aaKnown RBP3.07□□□□□ -1.92
Cchcr1-201ENSMUST00000045956 Gm11639A0A1D5RLM8 5808 aa2.99□□□□□ -1.93
Cchcr1-201ENSMUST00000045956 Krtap28-10A0A1Y7VP58 119 aa2.95□□□□□ -1.94
Cchcr1-201ENSMUST00000045956 Sprr2bO70554 98 aa2.93□□□□□ -1.94
Cchcr1-201ENSMUST00000045956 Gm45618A0A1B0GSA0 219 aa2.91□□□□□ -1.94
Cchcr1-201ENSMUST00000045956 Krtap28-13A0A087WQP5 138 aa2.88□□□□□ -1.95
Cchcr1-201ENSMUST00000045956 AhnakE9Q616 5656 aaKnown RBP2.87□□□□□ -1.95
Cchcr1-201ENSMUST00000045956 A030005K14RikA0A1Y7VNY1 122 aa2.84□□□□□ -1.95
Cchcr1-201ENSMUST00000045956 A0A1Y7VJ07 166 aa2.78□□□□□ -1.96
Cchcr1-201ENSMUST00000045956 Gm10229O08631 77 aa2.76□□□□□ -1.97
Cchcr1-201ENSMUST00000045956 NebE9Q1W3 7152 aa2.73□□□□□ -1.97
Cchcr1-201ENSMUST00000045956 Gm7544A0A1Y7VJ58 118 aa2.62□□□□□ -1.99
Cchcr1-201ENSMUST00000045956 Phgr1Q8K0G7 91 aa2.62□□□□□ -1.99
Cchcr1-201ENSMUST00000045956 Gm11567Q9D141 195 aa2.59□□□□□ -1.99
Cchcr1-201ENSMUST00000045956 Krtap21-1Q925H4 128 aa2.57□□□□□ -2
Cchcr1-201ENSMUST00000045956 A0A286YCP9 139 aa2.51□□□□□ -2.01
Cchcr1-201ENSMUST00000045956 Gm29735A0A1B0GT06 219 aa2.51□□□□□ -2.01
Cchcr1-201ENSMUST00000045956 Gpr98Q8VHN7 6298 aaKnown RBP2.49□□□□□ -2.01
Cchcr1-201ENSMUST00000045956 A030014E15RikA0A1Y7VJV2 120 aa2.45□□□□□ -2.02
Cchcr1-201ENSMUST00000045956 A030003K21RikA0A1Y7VIM3 128 aa2.41□□□□□ -2.02
Cchcr1-201ENSMUST00000045956 Krtap6-2O08884 159 aa2.3□□□□□ -2.04
Cchcr1-201ENSMUST00000045956 Gm6217A0A1Y7VJK9 128 aa2.29□□□□□ -2.04
Cchcr1-201ENSMUST00000045956 Krtap5-1Q64507 230 aa1.6□□□□□ -2.15
Cchcr1-201ENSMUST00000045956 Gm4559A4IF42 199 aa1.43□□□□□ -2.18
Retrieved 80 of 22,080 RNA–protein pairs in 6.1 ms