RNA–Protein interactions for RNA: ENSMUST00000041010.14

Ccdc9-201, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-201ENSMUST00000041010 Lce1a1Q9CQH5 143 aa7□□□□□ -1.29
Ccdc9-201ENSMUST00000041010 Mt4P47945 62 aa6.99□□□□□ -1.29
Ccdc9-201ENSMUST00000041010 Krtap4-9B1AQA9 244 aa6.98□□□□□ -1.29
Ccdc9-201ENSMUST00000041010 Gm10142J3KMP7 120 aa6.98□□□□□ -1.29
Ccdc9-201ENSMUST00000041010 Lce3bQ9CQM7 98 aa6.95□□□□□ -1.3
Ccdc9-201ENSMUST00000041010 Gm38119A0A0A6YX29 146 aa6.8□□□□□ -1.32
Ccdc9-201ENSMUST00000041010 Sprr2fO70557 76 aa6.78□□□□□ -1.32
Ccdc9-201ENSMUST00000041010 Sprr2eO70556 76 aa6.77□□□□□ -1.33
Ccdc9-201ENSMUST00000041010 Sprr2hO70559 108 aa6.75□□□□□ -1.33
Ccdc9-201ENSMUST00000041010 Lce3cQ91V05 98 aa6.74□□□□□ -1.33
Ccdc9-201ENSMUST00000041010 Lce3dE9Q8V1 98 aa6.71□□□□□ -1.34
Ccdc9-201ENSMUST00000041010 Krtap4-13Q9D7P3 165 aa6.71□□□□□ -1.34
Ccdc9-201ENSMUST00000041010 Fsip2A2ARZ3 6995 aa6.67□□□□□ -1.34
Ccdc9-201ENSMUST00000041010 Krtap6-3A0A087WQL6 57 aa6.66□□□□□ -1.34
Ccdc9-201ENSMUST00000041010 2300003K06RikA2A4M0 262 aa6.66□□□□□ -1.34
Ccdc9-201ENSMUST00000041010 Sprr2kO70562 68 aa6.64□□□□□ -1.35
Ccdc9-201ENSMUST00000041010 Lce3eF8VQJ0 98 aa6.59□□□□□ -1.35
Ccdc9-201ENSMUST00000041010 Lce3fQ6PAI4 98 aa6.59□□□□□ -1.35
Ccdc9-201ENSMUST00000041010 Syne1Q6ZWR6 8799 aa6.58□□□□□ -1.36
Ccdc9-201ENSMUST00000041010 Krtap31-1Q9D644 177 aa6.55□□□□□ -1.36
Ccdc9-201ENSMUST00000041010 Lce3aQ497I5 98 aa6.49□□□□□ -1.37
Ccdc9-201ENSMUST00000041010 Krtap4-7Q9D732 168 aa6.48□□□□□ -1.37
Ccdc9-201ENSMUST00000041010 Lce1lQ9D1G7 135 aa6.33□□□□□ -1.4
Ccdc9-201ENSMUST00000041010 A0A1Y7VJH8 109 aa6.31□□□□□ -1.4
Ccdc9-201ENSMUST00000041010 Lce1kJ3QP15 125 aa6.27□□□□□ -1.41
Ccdc9-201ENSMUST00000041010 Krtap4-16Q91W93 202 aa6.24□□□□□ -1.41
Ccdc9-201ENSMUST00000041010 Krtap5-2Q9D5Z7 189 aa6.2□□□□□ -1.42
Ccdc9-201ENSMUST00000041010 Mt1P02802 61 aaKnown RBP6.16□□□□□ -1.42
Ccdc9-201ENSMUST00000041010 Krtap20-2E9Q0A8 60 aa6.13□□□□□ -1.43
Ccdc9-201ENSMUST00000041010 ObscnA2AAJ9 8891 aaKnown RBP6.12□□□□□ -1.43
Ccdc9-201ENSMUST00000041010 Gm11568A2A4M2 211 aa6.1□□□□□ -1.43
Ccdc9-201ENSMUST00000041010 Krtap9-1Q64526 186 aa6.1□□□□□ -1.43
Ccdc9-201ENSMUST00000041010 Eppk1Q8R0W0 6548 aa5.95□□□□□ -1.46
Ccdc9-201ENSMUST00000041010 Gm10153A0A1B0GRL1 320 aa5.81□□□□□ -1.48
Ccdc9-201ENSMUST00000041010 Gm4553A0A1B0GSA9 284 aa5.76□□□□□ -1.49
Ccdc9-201ENSMUST00000041010 Gm11559Q9D3H7 191 aa5.72□□□□□ -1.49
Ccdc9-201ENSMUST00000041010 Gm45337A0A1B0GS71 263 aa5.69□□□□□ -1.5
Ccdc9-201ENSMUST00000041010 Krtap31-2Q8CAY5 177 aa5.65□□□□□ -1.5
Ccdc9-201ENSMUST00000041010 Gm11639A0A1D5RLM8 5808 aa5.6□□□□□ -1.51
Ccdc9-201ENSMUST00000041010 A030005L19RikA0A1Y7VIU2 113 aa5.58□□□□□ -1.52
Ccdc9-201ENSMUST00000041010 Mt3P28184 68 aa5.55□□□□□ -1.52
Ccdc9-201ENSMUST00000041010 Gm10024A0A0A0MQA4 119 aa5.54□□□□□ -1.52
Ccdc9-201ENSMUST00000041010 Gm2431E9Q8S1 172 aa5.53□□□□□ -1.52
Ccdc9-201ENSMUST00000041010 Gm40460A0A1B0GR10 244 aa5.52□□□□□ -1.53
Ccdc9-201ENSMUST00000041010 Gm7579A0A1B0GRJ4 243 aa5.52□□□□□ -1.53
Ccdc9-201ENSMUST00000041010 Krtap5-5Q2TA51 241 aa5.52□□□□□ -1.53
Ccdc9-201ENSMUST00000041010 Krtap5-4Q62220 223 aa5.52□□□□□ -1.53
Ccdc9-201ENSMUST00000041010 Gm11554B1AQB2 190 aa5.43□□□□□ -1.54
Ccdc9-201ENSMUST00000041010 Macf1Q9QXZ0 7354 aaKnown RBP5.42□□□□□ -1.54
Ccdc9-201ENSMUST00000041010 A0A1Y7VLE6 161 aa5.41□□□□□ -1.54
Ccdc9-201ENSMUST00000041010 Gpr98Q8VHN7 6298 aaKnown RBP5.38□□□□□ -1.55
Ccdc9-201ENSMUST00000041010 Kmt2dQ6PDK2 5588 aa5.36□□□□□ -1.55
Ccdc9-201ENSMUST00000041010 Hmcn1D3YXG0 5634 aa5.34□□□□□ -1.55
Ccdc9-201ENSMUST00000041010 Gm39115A0A1B0GSH7 232 aa5.19□□□□□ -1.58
Ccdc9-201ENSMUST00000041010 Muc19Q6PZE0 7524 aa5.18□□□□□ -1.58
Ccdc9-201ENSMUST00000041010 Muc16A0A140LJ72 8478 aa4.99□□□□□ -1.61
Ccdc9-201ENSMUST00000041010 DstQ91ZU6 7393 aaKnown RBP4.77□□□□□ -1.65
Ccdc9-201ENSMUST00000041010 NebE9Q1W3 7152 aa4.76□□□□□ -1.65
Ccdc9-201ENSMUST00000041010 Gm45618A0A1B0GSA0 219 aa4.64□□□□□ -1.67
Ccdc9-201ENSMUST00000041010 1110025L11RikO09048 78 aa4.64□□□□□ -1.67
Ccdc9-201ENSMUST00000041010 Krtap6-5Q925H3 78 aa4.64□□□□□ -1.67
Ccdc9-201ENSMUST00000041010 AhnakE9Q616 5656 aaKnown RBP4.53□□□□□ -1.68
Ccdc9-201ENSMUST00000041010 Sprr2bO70554 98 aa4.44□□□□□ -1.7
Ccdc9-201ENSMUST00000041010 A0A1Y7VJ07 166 aa4.4□□□□□ -1.71
Ccdc9-201ENSMUST00000041010 Gm29735A0A1B0GT06 219 aa4.16□□□□□ -1.74
Ccdc9-201ENSMUST00000041010 Gm10229O08631 77 aa4.12□□□□□ -1.75
Ccdc9-201ENSMUST00000041010 Gm11567Q9D141 195 aa4□□□□□ -1.77
Ccdc9-201ENSMUST00000041010 Phgr1Q8K0G7 91 aa3.95□□□□□ -1.78
Ccdc9-201ENSMUST00000041010 A0A286YCP9 139 aa3.86□□□□□ -1.79
Ccdc9-201ENSMUST00000041010 Krtap21-1Q925H4 128 aa3.8□□□□□ -1.8
Ccdc9-201ENSMUST00000041010 Krtap6-2O08884 159 aa3.53□□□□□ -1.84
Ccdc9-201ENSMUST00000041010 Krtap28-10A0A1Y7VP58 119 aa3.05□□□□□ -1.92
Ccdc9-201ENSMUST00000041010 A030003K21RikA0A1Y7VIM3 128 aa3.04□□□□□ -1.92
Ccdc9-201ENSMUST00000041010 Krtap5-1Q64507 230 aa2.93□□□□□ -1.94
Ccdc9-201ENSMUST00000041010 Gm4559A4IF42 199 aa2.37□□□□□ -2.03
Ccdc9-201ENSMUST00000041010 Gm6217A0A1Y7VJK9 128 aa2.3□□□□□ -2.04
Ccdc9-201ENSMUST00000041010 Krtap28-13A0A087WQP5 138 aa2.3□□□□□ -2.04
Ccdc9-201ENSMUST00000041010 A030005K14RikA0A1Y7VNY1 122 aa1.67□□□□□ -2.14
Ccdc9-201ENSMUST00000041010 Gm7544A0A1Y7VJ58 118 aa1.5□□□□□ -2.17
Ccdc9-201ENSMUST00000041010 A030014E15RikA0A1Y7VJV2 120 aa1.4□□□□□ -2.19
Retrieved 80 of 22,080 RNA–protein pairs in 56.8 ms