RNA–Protein interactions for RNA: ENSMUST00000035033.6

Copb2-201, Transcript of Coatomer subunit beta', mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb2, Length 3,050 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2-201ENSMUST00000035033 Lce3bQ9CQM7 98 aa4.23□□□□□ -1.73
Copb2-201ENSMUST00000035033 2300003K06RikA2A4M0 262 aa4.2□□□□□ -1.74
Copb2-201ENSMUST00000035033 Sprr2kO70562 68 aa4.19□□□□□ -1.74
Copb2-201ENSMUST00000035033 Lce1cQ9D1C5 147 aa4.15□□□□□ -1.75
Copb2-201ENSMUST00000035033 Gm9112A2AI92 75 aa4.1□□□□□ -1.75
Copb2-201ENSMUST00000035033 4933428G20RikQ9D3X4 101 aa4.1□□□□□ -1.75
Copb2-201ENSMUST00000035033 Krtap19-4Q925H7 84 aa4.08□□□□□ -1.76
Copb2-201ENSMUST00000035033 Lce3cQ91V05 98 aa3.99□□□□□ -1.77
Copb2-201ENSMUST00000035033 Lce1kJ3QP15 125 aa3.98□□□□□ -1.77
Copb2-201ENSMUST00000035033 Lce1fB9EJP6 147 aa3.97□□□□□ -1.77
Copb2-201ENSMUST00000035033 Lce1a1Q9CQH5 143 aa3.97□□□□□ -1.77
Copb2-201ENSMUST00000035033 Lce1lQ9D1G7 135 aa3.97□□□□□ -1.77
Copb2-201ENSMUST00000035033 Sprr2iO70560 76 aa3.97□□□□□ -1.77
Copb2-201ENSMUST00000035033 Gm10100J3QK64 120 aa3.96□□□□□ -1.78
Copb2-201ENSMUST00000035033 Krtap6-3A0A087WQL6 57 aa3.93□□□□□ -1.78
Copb2-201ENSMUST00000035033 Lce3eF8VQJ0 98 aa3.93□□□□□ -1.78
Copb2-201ENSMUST00000035033 Lce3fQ6PAI4 98 aa3.93□□□□□ -1.78
Copb2-201ENSMUST00000035033 Lce3dE9Q8V1 98 aa3.91□□□□□ -1.78
Copb2-201ENSMUST00000035033 A0A1Y7VJH8 109 aa3.89□□□□□ -1.79
Copb2-201ENSMUST00000035033 Krtap20-2E9Q0A8 60 aa3.86□□□□□ -1.79
Copb2-201ENSMUST00000035033 Mt1P02802 61 aaKnown RBP3.86□□□□□ -1.79
Copb2-201ENSMUST00000035033 Gm10142J3KMP7 120 aa3.85□□□□□ -1.79
Copb2-201ENSMUST00000035033 ObscnA2AAJ9 8891 aaKnown RBP3.83□□□□□ -1.8
Copb2-201ENSMUST00000035033 Gm11568A2A4M2 211 aa3.83□□□□□ -1.8
Copb2-201ENSMUST00000035033 Krtap9-1Q64526 186 aa3.83□□□□□ -1.8
Copb2-201ENSMUST00000035033 Krtap5-2Q9D5Z7 189 aa3.79□□□□□ -1.8
Copb2-201ENSMUST00000035033 Lce3aQ497I5 98 aa3.76□□□□□ -1.81
Copb2-201ENSMUST00000035033 Krtap31-2Q8CAY5 177 aa3.76□□□□□ -1.81
Copb2-201ENSMUST00000035033 Sprr2hO70559 108 aa3.71□□□□□ -1.82
Copb2-201ENSMUST00000035033 Krtap31-1Q9D644 177 aa3.64□□□□□ -1.83
Copb2-201ENSMUST00000035033 Macf1Q9QXZ0 7354 aaKnown RBP3.64□□□□□ -1.83
Copb2-201ENSMUST00000035033 Gm10153A0A1B0GRL1 320 aa3.59□□□□□ -1.84
Copb2-201ENSMUST00000035033 Gm11559Q9D3H7 191 aa3.52□□□□□ -1.85
Copb2-201ENSMUST00000035033 Gm4553A0A1B0GSA9 284 aa3.51□□□□□ -1.85
Copb2-201ENSMUST00000035033 Sprr2eO70556 76 aa3.5□□□□□ -1.85
Copb2-201ENSMUST00000035033 Hmcn1D3YXG0 5634 aa3.48□□□□□ -1.85
Copb2-201ENSMUST00000035033 Mt3P28184 68 aa3.46□□□□□ -1.86
Copb2-201ENSMUST00000035033 Gm45337A0A1B0GS71 263 aa3.45□□□□□ -1.86
Copb2-201ENSMUST00000035033 Gm11554B1AQB2 190 aa3.45□□□□□ -1.86
Copb2-201ENSMUST00000035033 Gm2431E9Q8S1 172 aa3.41□□□□□ -1.86
Copb2-201ENSMUST00000035033 Kmt2dQ6PDK2 5588 aa3.39□□□□□ -1.87
Copb2-201ENSMUST00000035033 A0A1Y7VLE6 161 aa3.38□□□□□ -1.87
Copb2-201ENSMUST00000035033 Gm7544A0A1Y7VJ58 118 aa3.36□□□□□ -1.87
Copb2-201ENSMUST00000035033 Gm40460A0A1B0GR10 244 aa3.35□□□□□ -1.87
Copb2-201ENSMUST00000035033 Gm7579A0A1B0GRJ4 243 aa3.35□□□□□ -1.87
Copb2-201ENSMUST00000035033 Krtap5-5Q2TA51 241 aa3.35□□□□□ -1.87
Copb2-201ENSMUST00000035033 Krtap5-4Q62220 223 aa3.35□□□□□ -1.87
Copb2-201ENSMUST00000035033 Krtap28-10A0A1Y7VP58 119 aa3.27□□□□□ -1.89
Copb2-201ENSMUST00000035033 Sprr2fO70557 76 aa3.27□□□□□ -1.89
Copb2-201ENSMUST00000035033 Gm10024A0A0A0MQA4 119 aa3.24□□□□□ -1.89
Copb2-201ENSMUST00000035033 A030005L19RikA0A1Y7VIU2 113 aa3.2□□□□□ -1.9
Copb2-201ENSMUST00000035033 Gm39115A0A1B0GSH7 232 aa3.13□□□□□ -1.91
Copb2-201ENSMUST00000035033 DstQ91ZU6 7393 aaKnown RBP3.12□□□□□ -1.91
Copb2-201ENSMUST00000035033 Eppk1Q8R0W0 6548 aa3.12□□□□□ -1.91
Copb2-201ENSMUST00000035033 A0A286YCP9 139 aa3.12□□□□□ -1.91
Copb2-201ENSMUST00000035033 Krtap4-16Q91W93 202 aa3.12□□□□□ -1.91
Copb2-201ENSMUST00000035033 Muc19Q6PZE0 7524 aa3.09□□□□□ -1.91
Copb2-201ENSMUST00000035033 Gm11639A0A1D5RLM8 5808 aa3.06□□□□□ -1.92
Copb2-201ENSMUST00000035033 A030005K14RikA0A1Y7VNY1 122 aa3.04□□□□□ -1.92
Copb2-201ENSMUST00000035033 Muc16A0A140LJ72 8478 aa3.01□□□□□ -1.93
Copb2-201ENSMUST00000035033 A030003K21RikA0A1Y7VIM3 128 aa2.96□□□□□ -1.93
Copb2-201ENSMUST00000035033 Gm6217A0A1Y7VJK9 128 aa2.96□□□□□ -1.93
Copb2-201ENSMUST00000035033 Krtap28-13A0A087WQP5 138 aa2.92□□□□□ -1.94
Copb2-201ENSMUST00000035033 1110025L11RikO09048 78 aa2.91□□□□□ -1.94
Copb2-201ENSMUST00000035033 Krtap6-5Q925H3 78 aa2.91□□□□□ -1.94
Copb2-201ENSMUST00000035033 AhnakE9Q616 5656 aaKnown RBP2.9□□□□□ -1.95
Copb2-201ENSMUST00000035033 NebE9Q1W3 7152 aa2.82□□□□□ -1.96
Copb2-201ENSMUST00000035033 Gm45618A0A1B0GSA0 219 aa2.73□□□□□ -1.97
Copb2-201ENSMUST00000035033 A0A1Y7VJ07 166 aa2.72□□□□□ -1.97
Copb2-201ENSMUST00000035033 Gpr98Q8VHN7 6298 aaKnown RBP2.72□□□□□ -1.97
Copb2-201ENSMUST00000035033 Gm10229O08631 77 aa2.58□□□□□ -2
Copb2-201ENSMUST00000035033 Gm11567Q9D141 195 aa2.53□□□□□ -2
Copb2-201ENSMUST00000035033 Sprr2bO70554 98 aa2.53□□□□□ -2.01
Copb2-201ENSMUST00000035033 Gm29735A0A1B0GT06 219 aa2.51□□□□□ -2.01
Copb2-201ENSMUST00000035033 Krtap21-1Q925H4 128 aa2.38□□□□□ -2.03
Copb2-201ENSMUST00000035033 Krtap6-2O08884 159 aa2.21□□□□□ -2.06
Copb2-201ENSMUST00000035033 Phgr1Q8K0G7 91 aa2.21□□□□□ -2.06
Copb2-201ENSMUST00000035033 A030014E15RikA0A1Y7VJV2 120 aa2.16□□□□□ -2.06
Copb2-201ENSMUST00000035033 Krtap5-1Q64507 230 aa1.63□□□□□ -2.15
Copb2-201ENSMUST00000035033 Gm4559A4IF42 199 aa1.45□□□□□ -2.18
Retrieved 80 of 22,080 RNA–protein pairs in 81.4 ms