RNA–Protein interactions for RNA: ENSMUST00000028826.3

Chgb-201, Transcript of Secretogranin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chgb, Length 2,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chgb-201ENSMUST00000028826 Gm11595B1AQA7 289 aa5.03□□□□□ -1.6
Chgb-201ENSMUST00000028826 Krtap4-8B1AQA8 209 aa5.03□□□□□ -1.6
Chgb-201ENSMUST00000028826 Mt4P47945 62 aa4.95□□□□□ -1.62
Chgb-201ENSMUST00000028826 Lce3cQ91V05 98 aa4.94□□□□□ -1.62
Chgb-201ENSMUST00000028826 Krtap4-9B1AQA9 244 aa4.91□□□□□ -1.62
Chgb-201ENSMUST00000028826 Lce3dE9Q8V1 98 aa4.9□□□□□ -1.62
Chgb-201ENSMUST00000028826 Sprr2hO70559 108 aa4.86□□□□□ -1.63
Chgb-201ENSMUST00000028826 Gm38119A0A0A6YX29 146 aa4.86□□□□□ -1.63
Chgb-201ENSMUST00000028826 Lce3eF8VQJ0 98 aa4.85□□□□□ -1.63
Chgb-201ENSMUST00000028826 Lce3fQ6PAI4 98 aa4.85□□□□□ -1.63
Chgb-201ENSMUST00000028826 Lce1bQ9D149 137 aa4.85□□□□□ -1.63
Chgb-201ENSMUST00000028826 Fsip2A2ARZ3 6995 aa4.84□□□□□ -1.63
Chgb-201ENSMUST00000028826 Sprr2iO70560 76 aa4.83□□□□□ -1.64
Chgb-201ENSMUST00000028826 ObscnA2AAJ9 8891 aaKnown RBP4.81□□□□□ -1.64
Chgb-201ENSMUST00000028826 Krtap4-13Q9D7P3 165 aa4.74□□□□□ -1.65
Chgb-201ENSMUST00000028826 Sprr2eO70556 76 aa4.71□□□□□ -1.66
Chgb-201ENSMUST00000028826 Lce3aQ497I5 98 aa4.7□□□□□ -1.66
Chgb-201ENSMUST00000028826 2300003K06RikA2A4M0 262 aa4.69□□□□□ -1.66
Chgb-201ENSMUST00000028826 Sprr2kO70562 68 aa4.64□□□□□ -1.67
Chgb-201ENSMUST00000028826 Sprr2fO70557 76 aa4.6□□□□□ -1.67
Chgb-201ENSMUST00000028826 Krtap31-1Q9D644 177 aa4.59□□□□□ -1.67
Chgb-201ENSMUST00000028826 Krtap4-7Q9D732 168 aa4.55□□□□□ -1.68
Chgb-201ENSMUST00000028826 Mt1P02802 61 aaKnown RBP4.52□□□□□ -1.69
Chgb-201ENSMUST00000028826 Lce1lQ9D1G7 135 aa4.52□□□□□ -1.69
Chgb-201ENSMUST00000028826 Lce1kJ3QP15 125 aa4.5□□□□□ -1.69
Chgb-201ENSMUST00000028826 Krtap4-16Q91W93 202 aa4.41□□□□□ -1.7
Chgb-201ENSMUST00000028826 A0A1Y7VJH8 109 aa4.38□□□□□ -1.71
Chgb-201ENSMUST00000028826 Krtap6-3A0A087WQL6 57 aa4.37□□□□□ -1.71
Chgb-201ENSMUST00000028826 Krtap20-2E9Q0A8 60 aa4.33□□□□□ -1.72
Chgb-201ENSMUST00000028826 Gm11568A2A4M2 211 aa4.3□□□□□ -1.72
Chgb-201ENSMUST00000028826 Krtap9-1Q64526 186 aa4.3□□□□□ -1.72
Chgb-201ENSMUST00000028826 Krtap5-2Q9D5Z7 189 aa4.25□□□□□ -1.73
Chgb-201ENSMUST00000028826 Gm10024A0A0A0MQA4 119 aa4.12□□□□□ -1.75
Chgb-201ENSMUST00000028826 Macf1Q9QXZ0 7354 aaKnown RBP4.07□□□□□ -1.76
Chgb-201ENSMUST00000028826 Muc16A0A140LJ72 8478 aa4.07□□□□□ -1.76
Chgb-201ENSMUST00000028826 Gm10153A0A1B0GRL1 320 aa4.03□□□□□ -1.76
Chgb-201ENSMUST00000028826 A0A1Y7VLE6 161 aa3.97□□□□□ -1.77
Chgb-201ENSMUST00000028826 Mt3P28184 68 aa3.95□□□□□ -1.78
Chgb-201ENSMUST00000028826 Gm11559Q9D3H7 191 aa3.94□□□□□ -1.78
Chgb-201ENSMUST00000028826 Gm4553A0A1B0GSA9 284 aa3.93□□□□□ -1.78
Chgb-201ENSMUST00000028826 Gm45337A0A1B0GS71 263 aa3.88□□□□□ -1.79
Chgb-201ENSMUST00000028826 Krtap31-2Q8CAY5 177 aa3.86□□□□□ -1.79
Chgb-201ENSMUST00000028826 Hmcn1D3YXG0 5634 aa3.86□□□□□ -1.79
Chgb-201ENSMUST00000028826 Gm11554B1AQB2 190 aa3.85□□□□□ -1.79
Chgb-201ENSMUST00000028826 Kmt2dQ6PDK2 5588 aa3.85□□□□□ -1.79
Chgb-201ENSMUST00000028826 Gm2431E9Q8S1 172 aa3.83□□□□□ -1.8
Chgb-201ENSMUST00000028826 Gm40460A0A1B0GR10 244 aa3.76□□□□□ -1.81
Chgb-201ENSMUST00000028826 Gm7579A0A1B0GRJ4 243 aa3.76□□□□□ -1.81
Chgb-201ENSMUST00000028826 Krtap5-5Q2TA51 241 aa3.76□□□□□ -1.81
Chgb-201ENSMUST00000028826 Krtap5-4Q62220 223 aa3.76□□□□□ -1.81
Chgb-201ENSMUST00000028826 A030005L19RikA0A1Y7VIU2 113 aa3.56□□□□□ -1.84
Chgb-201ENSMUST00000028826 Muc19Q6PZE0 7524 aa3.56□□□□□ -1.84
Chgb-201ENSMUST00000028826 Gm39115A0A1B0GSH7 232 aa3.51□□□□□ -1.85
Chgb-201ENSMUST00000028826 1110025L11RikO09048 78 aa3.49□□□□□ -1.85
Chgb-201ENSMUST00000028826 Krtap6-5Q925H3 78 aa3.49□□□□□ -1.85
Chgb-201ENSMUST00000028826 Eppk1Q8R0W0 6548 aa3.41□□□□□ -1.86
Chgb-201ENSMUST00000028826 DstQ91ZU6 7393 aaKnown RBP3.4□□□□□ -1.87
Chgb-201ENSMUST00000028826 Gm11639A0A1D5RLM8 5808 aa3.31□□□□□ -1.88
Chgb-201ENSMUST00000028826 NebE9Q1W3 7152 aa3.23□□□□□ -1.89
Chgb-201ENSMUST00000028826 Sprr2bO70554 98 aa3.17□□□□□ -1.9
Chgb-201ENSMUST00000028826 AhnakE9Q616 5656 aaKnown RBP3.15□□□□□ -1.9
Chgb-201ENSMUST00000028826 A0A1Y7VJ07 166 aa3.11□□□□□ -1.91
Chgb-201ENSMUST00000028826 Gm10229O08631 77 aa3.07□□□□□ -1.92
Chgb-201ENSMUST00000028826 Gm45618A0A1B0GSA0 219 aa3.06□□□□□ -1.92
Chgb-201ENSMUST00000028826 Gpr98Q8VHN7 6298 aaKnown RBP3.01□□□□□ -1.93
Chgb-201ENSMUST00000028826 Krtap28-10A0A1Y7VP58 119 aa3.01□□□□□ -1.93
Chgb-201ENSMUST00000028826 Gm11567Q9D141 195 aa2.91□□□□□ -1.94
Chgb-201ENSMUST00000028826 Krtap21-1Q925H4 128 aa2.87□□□□□ -1.95
Chgb-201ENSMUST00000028826 Phgr1Q8K0G7 91 aa2.86□□□□□ -1.95
Chgb-201ENSMUST00000028826 A0A286YCP9 139 aa2.85□□□□□ -1.95
Chgb-201ENSMUST00000028826 Krtap28-13A0A087WQP5 138 aa2.82□□□□□ -1.96
Chgb-201ENSMUST00000028826 Gm29735A0A1B0GT06 219 aa2.82□□□□□ -1.96
Chgb-201ENSMUST00000028826 Gm7544A0A1Y7VJ58 118 aa2.77□□□□□ -1.97
Chgb-201ENSMUST00000028826 A030005K14RikA0A1Y7VNY1 122 aa2.76□□□□□ -1.97
Chgb-201ENSMUST00000028826 Krtap6-2O08884 159 aa2.57□□□□□ -2
Chgb-201ENSMUST00000028826 A030003K21RikA0A1Y7VIM3 128 aa2.4□□□□□ -2.02
Chgb-201ENSMUST00000028826 Gm6217A0A1Y7VJK9 128 aa2.35□□□□□ -2.03
Chgb-201ENSMUST00000028826 A030014E15RikA0A1Y7VJV2 120 aa2.28□□□□□ -2.04
Chgb-201ENSMUST00000028826 Krtap5-1Q64507 230 aa1.82□□□□□ -2.12
Chgb-201ENSMUST00000028826 Gm4559A4IF42 199 aa1.63□□□□□ -2.15
Retrieved 80 of 22,080 RNA–protein pairs in 8.2 ms