RNA–Protein interactions for RNA: ENSMUST00000024851.9

Ndc80-201, Transcript of Kinetochore protein NDC80 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc80, Length 2,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80-201ENSMUST00000024851 A0A1Y7VJ07 166 aa4.3□□□□□ -1.72
Ndc80-201ENSMUST00000024851 Syne2Q6ZWQ0 6874 aaKnown RBP4.3□□□□□ -1.72
Ndc80-201ENSMUST00000024851 Gm11564A2A4L9 201 aa4.28□□□□□ -1.72
Ndc80-201ENSMUST00000024851 Gm11595B1AQA7 289 aa4.28□□□□□ -1.72
Ndc80-201ENSMUST00000024851 Krtap4-8B1AQA8 209 aa4.28□□□□□ -1.72
Ndc80-201ENSMUST00000024851 Mt4P47945 62 aa4.25□□□□□ -1.73
Ndc80-201ENSMUST00000024851 Krtap19-4Q925H7 84 aa4.22□□□□□ -1.73
Ndc80-201ENSMUST00000024851 Fsip2A2ARZ3 6995 aa4.22□□□□□ -1.73
Ndc80-201ENSMUST00000024851 Lce3bQ9CQM7 98 aa4.2□□□□□ -1.74
Ndc80-201ENSMUST00000024851 Lce1bQ9D149 137 aa4.2□□□□□ -1.74
Ndc80-201ENSMUST00000024851 Gm38119A0A0A6YX29 146 aa4.19□□□□□ -1.74
Ndc80-201ENSMUST00000024851 Krtap4-9B1AQA9 244 aa4.19□□□□□ -1.74
Ndc80-201ENSMUST00000024851 Lce1fB9EJP6 147 aa4.17□□□□□ -1.74
Ndc80-201ENSMUST00000024851 Lce1a1Q9CQH5 143 aa4.17□□□□□ -1.74
Ndc80-201ENSMUST00000024851 A030014E15RikA0A1Y7VJV2 120 aa4.16□□□□□ -1.74
Ndc80-201ENSMUST00000024851 Gm10100J3QK64 120 aa4.13□□□□□ -1.75
Ndc80-201ENSMUST00000024851 A030003K21RikA0A1Y7VIM3 128 aa4.06□□□□□ -1.76
Ndc80-201ENSMUST00000024851 Krtap4-13Q9D7P3 165 aa4.05□□□□□ -1.76
Ndc80-201ENSMUST00000024851 2300003K06RikA2A4M0 262 aa4.05□□□□□ -1.76
Ndc80-201ENSMUST00000024851 Gm10142J3KMP7 120 aa4.03□□□□□ -1.76
Ndc80-201ENSMUST00000024851 Lce3cQ91V05 98 aa4.01□□□□□ -1.77
Ndc80-201ENSMUST00000024851 Lce3eF8VQJ0 98 aa3.99□□□□□ -1.77
Ndc80-201ENSMUST00000024851 Lce3fQ6PAI4 98 aa3.99□□□□□ -1.77
Ndc80-201ENSMUST00000024851 ObscnA2AAJ9 8891 aaKnown RBP3.96□□□□□ -1.78
Ndc80-201ENSMUST00000024851 Sprr2kO70562 68 aa3.95□□□□□ -1.78
Ndc80-201ENSMUST00000024851 Gm6217A0A1Y7VJK9 128 aa3.93□□□□□ -1.78
Ndc80-201ENSMUST00000024851 Lce3dE9Q8V1 98 aa3.93□□□□□ -1.78
Ndc80-201ENSMUST00000024851 Lce1kJ3QP15 125 aa3.91□□□□□ -1.78
Ndc80-201ENSMUST00000024851 Sprr2hO70559 108 aa3.91□□□□□ -1.78
Ndc80-201ENSMUST00000024851 A0A286YCP9 139 aa3.9□□□□□ -1.79
Ndc80-201ENSMUST00000024851 Krtap31-2Q8CAY5 177 aa3.9□□□□□ -1.79
Ndc80-201ENSMUST00000024851 Mt1P02802 61 aaKnown RBP3.87□□□□□ -1.79
Ndc80-201ENSMUST00000024851 Sprr2iO70560 76 aa3.85□□□□□ -1.79
Ndc80-201ENSMUST00000024851 Lce1lQ9D1G7 135 aa3.85□□□□□ -1.79
Ndc80-201ENSMUST00000024851 Lce3aQ497I5 98 aa3.8□□□□□ -1.8
Ndc80-201ENSMUST00000024851 Gm11568A2A4M2 211 aa3.78□□□□□ -1.8
Ndc80-201ENSMUST00000024851 Krtap9-1Q64526 186 aa3.78□□□□□ -1.8
Ndc80-201ENSMUST00000024851 Krtap20-2E9Q0A8 60 aa3.74□□□□□ -1.81
Ndc80-201ENSMUST00000024851 Sprr2eO70556 76 aa3.74□□□□□ -1.81
Ndc80-201ENSMUST00000024851 Krtap31-1Q9D644 177 aa3.72□□□□□ -1.81
Ndc80-201ENSMUST00000024851 Krtap5-2Q9D5Z7 189 aa3.71□□□□□ -1.82
Ndc80-201ENSMUST00000024851 Krtap6-3A0A087WQL6 57 aa3.67□□□□□ -1.82
Ndc80-201ENSMUST00000024851 Gm10153A0A1B0GRL1 320 aa3.57□□□□□ -1.84
Ndc80-201ENSMUST00000024851 Sprr2fO70557 76 aa3.56□□□□□ -1.84
Ndc80-201ENSMUST00000024851 Macf1Q9QXZ0 7354 aaKnown RBP3.5□□□□□ -1.85
Ndc80-201ENSMUST00000024851 Mt3P28184 68 aa3.42□□□□□ -1.86
Ndc80-201ENSMUST00000024851 Gm4553A0A1B0GSA9 284 aa3.39□□□□□ -1.87
Ndc80-201ENSMUST00000024851 Gm45337A0A1B0GS71 263 aa3.38□□□□□ -1.87
Ndc80-201ENSMUST00000024851 Gm11559Q9D3H7 191 aa3.37□□□□□ -1.87
Ndc80-201ENSMUST00000024851 Krtap4-16Q91W93 202 aa3.36□□□□□ -1.87
Ndc80-201ENSMUST00000024851 Hmcn1D3YXG0 5634 aa3.34□□□□□ -1.87
Ndc80-201ENSMUST00000024851 Gm10024A0A0A0MQA4 119 aa3.32□□□□□ -1.88
Ndc80-201ENSMUST00000024851 Gm2431E9Q8S1 172 aa3.3□□□□□ -1.88
Ndc80-201ENSMUST00000024851 Kmt2dQ6PDK2 5588 aa3.28□□□□□ -1.88
Ndc80-201ENSMUST00000024851 Gm40460A0A1B0GR10 244 aa3.28□□□□□ -1.88
Ndc80-201ENSMUST00000024851 Gm7579A0A1B0GRJ4 243 aa3.28□□□□□ -1.88
Ndc80-201ENSMUST00000024851 Krtap5-5Q2TA51 241 aa3.28□□□□□ -1.88
Ndc80-201ENSMUST00000024851 Krtap5-4Q62220 223 aa3.28□□□□□ -1.88
Ndc80-201ENSMUST00000024851 Gm11554B1AQB2 190 aa3.27□□□□□ -1.89
Ndc80-201ENSMUST00000024851 Muc16A0A140LJ72 8478 aa3.16□□□□□ -1.9
Ndc80-201ENSMUST00000024851 Gm39115A0A1B0GSH7 232 aa3.02□□□□□ -1.93
Ndc80-201ENSMUST00000024851 Muc19Q6PZE0 7524 aa2.97□□□□□ -1.93
Ndc80-201ENSMUST00000024851 DstQ91ZU6 7393 aaKnown RBP2.96□□□□□ -1.94
Ndc80-201ENSMUST00000024851 1110025L11RikO09048 78 aa2.94□□□□□ -1.94
Ndc80-201ENSMUST00000024851 Krtap6-5Q925H3 78 aa2.94□□□□□ -1.94
Ndc80-201ENSMUST00000024851 Gm45618A0A1B0GSA0 219 aa2.89□□□□□ -1.95
Ndc80-201ENSMUST00000024851 Gm11639A0A1D5RLM8 5808 aa2.83□□□□□ -1.96
Ndc80-201ENSMUST00000024851 Eppk1Q8R0W0 6548 aa2.79□□□□□ -1.96
Ndc80-201ENSMUST00000024851 AhnakE9Q616 5656 aaKnown RBP2.74□□□□□ -1.97
Ndc80-201ENSMUST00000024851 Gm11567Q9D141 195 aa2.65□□□□□ -1.99
Ndc80-201ENSMUST00000024851 Gm29735A0A1B0GT06 219 aa2.64□□□□□ -1.99
Ndc80-201ENSMUST00000024851 Sprr2bO70554 98 aa2.61□□□□□ -1.99
Ndc80-201ENSMUST00000024851 Gm10229O08631 77 aa2.6□□□□□ -1.99
Ndc80-201ENSMUST00000024851 NebE9Q1W3 7152 aa2.59□□□□□ -2
Ndc80-201ENSMUST00000024851 Krtap21-1Q925H4 128 aa2.42□□□□□ -2.02
Ndc80-201ENSMUST00000024851 Gpr98Q8VHN7 6298 aaKnown RBP2.39□□□□□ -2.03
Ndc80-201ENSMUST00000024851 Phgr1Q8K0G7 91 aa2.32□□□□□ -2.04
Ndc80-201ENSMUST00000024851 Krtap6-2O08884 159 aa2.21□□□□□ -2.06
Ndc80-201ENSMUST00000024851 Krtap5-1Q64507 230 aa1.97□□□□□ -2.09
Ndc80-201ENSMUST00000024851 Gm4559A4IF42 199 aa1.88□□□□□ -2.11
Retrieved 80 of 22,080 RNA–protein pairs in 54.6 ms