RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Syne1Q6ZWR6 8799 aa7,73□□□□□ -1,17
Cldnd1-201ENSMUST00000023426 A0A1Y7VJ07 166 aa7,69□□□□□ -1,18
Cldnd1-201ENSMUST00000023426 Lce1fB9EJP6 147 aa7,69□□□□□ -1,18
Cldnd1-201ENSMUST00000023426 Lce1a1Q9CQH5 143 aa7,69□□□□□ -1,18
Cldnd1-201ENSMUST00000023426 Gm10142J3KMP7 120 aa7,65□□□□□ -1,18
Cldnd1-201ENSMUST00000023426 Krtap4-2B1AQ85 167 aa7,64□□□□□ -1,19
Cldnd1-201ENSMUST00000023426 Gm11596B1AQB0 205 aa7,62□□□□□ -1,19
Cldnd1-201ENSMUST00000023426 Lce1bQ9D149 137 aa7,58□□□□□ -1,2
Cldnd1-201ENSMUST00000023426 Gm11564A2A4L9 201 aa7,57□□□□□ -1,2
Cldnd1-201ENSMUST00000023426 Gm11595B1AQA7 289 aa7,57□□□□□ -1,2
Cldnd1-201ENSMUST00000023426 Krtap4-8B1AQA8 209 aa7,57□□□□□ -1,2
Cldnd1-201ENSMUST00000023426 Mt4P47945 62 aa7,53□□□□□ -1,2
Cldnd1-201ENSMUST00000023426 Gm38119A0A0A6YX29 146 aa7,48□□□□□ -1,21
Cldnd1-201ENSMUST00000023426 Lce3cQ91V05 98 aa7,47□□□□□ -1,21
Cldnd1-201ENSMUST00000023426 Lce3eF8VQJ0 98 aa7,44□□□□□ -1,22
Cldnd1-201ENSMUST00000023426 Lce3fQ6PAI4 98 aa7,44□□□□□ -1,22
Cldnd1-201ENSMUST00000023426 Sprr2hO70559 108 aa7,43□□□□□ -1,22
Cldnd1-201ENSMUST00000023426 Krtap4-9B1AQA9 244 aa7,41□□□□□ -1,22
Cldnd1-201ENSMUST00000023426 Lce3dE9Q8V1 98 aa7,39□□□□□ -1,23
Cldnd1-201ENSMUST00000023426 A030014E15RikA0A1Y7VJV2 120 aa7,36□□□□□ -1,23
Cldnd1-201ENSMUST00000023426 Syne2Q6ZWQ0 6874 aaKnown RBP7,36□□□□□ -1,23
Cldnd1-201ENSMUST00000023426 Sprr2iO70560 76 aa7,3□□□□□ -1,24
Cldnd1-201ENSMUST00000023426 Sprr2eO70556 76 aa7,24□□□□□ -1,25
Cldnd1-201ENSMUST00000023426 A030003K21RikA0A1Y7VIM3 128 aa7,23□□□□□ -1,25
Cldnd1-201ENSMUST00000023426 ObscnA2AAJ9 8891 aaKnown RBP7,2□□□□□ -1,26
Cldnd1-201ENSMUST00000023426 2300003K06RikA2A4M0 262 aa7,19□□□□□ -1,26
Cldnd1-201ENSMUST00000023426 Sprr2kO70562 68 aa7,18□□□□□ -1,26
Cldnd1-201ENSMUST00000023426 Fsip2A2ARZ3 6995 aa7,16□□□□□ -1,26
Cldnd1-201ENSMUST00000023426 Mt1P02802 61 aaKnown RBP7,13□□□□□ -1,27
Cldnd1-201ENSMUST00000023426 Krtap4-13Q9D7P3 165 aa7,13□□□□□ -1,27
Cldnd1-201ENSMUST00000023426 Lce3aQ497I5 98 aa7,13□□□□□ -1,27
Cldnd1-201ENSMUST00000023426 Lce1kJ3QP15 125 aa7,06□□□□□ -1,28
Cldnd1-201ENSMUST00000023426 Lce1lQ9D1G7 135 aa7,06□□□□□ -1,28
Cldnd1-201ENSMUST00000023426 Sprr2fO70557 76 aa6,95□□□□□ -1,3
Cldnd1-201ENSMUST00000023426 Gm6217A0A1Y7VJK9 128 aa6,82□□□□□ -1,32
Cldnd1-201ENSMUST00000023426 Gm11568A2A4M2 211 aa6,8□□□□□ -1,32
Cldnd1-201ENSMUST00000023426 Krtap9-1Q64526 186 aa6,8□□□□□ -1,32
Cldnd1-201ENSMUST00000023426 Krtap31-1Q9D644 177 aa6,79□□□□□ -1,32
Cldnd1-201ENSMUST00000023426 Krtap5-2Q9D5Z7 189 aa6,71□□□□□ -1,33
Cldnd1-201ENSMUST00000023426 Krtap20-2E9Q0A8 60 aa6,66□□□□□ -1,34
Cldnd1-201ENSMUST00000023426 A0A286YCP9 139 aa6,65□□□□□ -1,34
Cldnd1-201ENSMUST00000023426 Krtap6-3A0A087WQL6 57 aa6,55□□□□□ -1,36
Cldnd1-201ENSMUST00000023426 Gm10153A0A1B0GRL1 320 aa6,48□□□□□ -1,37
Cldnd1-201ENSMUST00000023426 Mt3P28184 68 aa6,34□□□□□ -1,39
Cldnd1-201ENSMUST00000023426 Krtap4-16Q91W93 202 aa6,32□□□□□ -1,4
Cldnd1-201ENSMUST00000023426 Gm10024A0A0A0MQA4 119 aa6,29□□□□□ -1,4
Cldnd1-201ENSMUST00000023426 Gm45337A0A1B0GS71 263 aa6,14□□□□□ -1,43
Cldnd1-201ENSMUST00000023426 Gm4553A0A1B0GSA9 284 aa6,13□□□□□ -1,43
Cldnd1-201ENSMUST00000023426 Gm11559Q9D3H7 191 aa6,03□□□□□ -1,44
Cldnd1-201ENSMUST00000023426 Gm40460A0A1B0GR10 244 aa5,98□□□□□ -1,45
Cldnd1-201ENSMUST00000023426 Gm7579A0A1B0GRJ4 243 aa5,98□□□□□ -1,45
Cldnd1-201ENSMUST00000023426 Krtap5-5Q2TA51 241 aa5,98□□□□□ -1,45
Cldnd1-201ENSMUST00000023426 Krtap5-4Q62220 223 aa5,98□□□□□ -1,45
Cldnd1-201ENSMUST00000023426 Macf1Q9QXZ0 7354 aaKnown RBP5,92□□□□□ -1,46
Cldnd1-201ENSMUST00000023426 Gm2431E9Q8S1 172 aa5,9□□□□□ -1,46
Cldnd1-201ENSMUST00000023426 Hmcn1D3YXG0 5634 aa5,84□□□□□ -1,47
Cldnd1-201ENSMUST00000023426 Gm11554B1AQB2 190 aa5,74□□□□□ -1,49
Cldnd1-201ENSMUST00000023426 Kmt2dQ6PDK2 5588 aa5,57□□□□□ -1,52
Cldnd1-201ENSMUST00000023426 1110025L11RikO09048 78 aa5,49□□□□□ -1,53
Cldnd1-201ENSMUST00000023426 Krtap6-5Q925H3 78 aa5,49□□□□□ -1,53
Cldnd1-201ENSMUST00000023426 Gm39115A0A1B0GSH7 232 aa5,46□□□□□ -1,54
Cldnd1-201ENSMUST00000023426 Muc16A0A140LJ72 8478 aa5,46□□□□□ -1,54
Cldnd1-201ENSMUST00000023426 Gm45618A0A1B0GSA0 219 aa5,25□□□□□ -1,57
Cldnd1-201ENSMUST00000023426 Sprr2bO70554 98 aa5,12□□□□□ -1,59
Cldnd1-201ENSMUST00000023426 Muc19Q6PZE0 7524 aa5,06□□□□□ -1,6
Cldnd1-201ENSMUST00000023426 DstQ91ZU6 7393 aaKnown RBP5,06□□□□□ -1,6
Cldnd1-201ENSMUST00000023426 Gm11639A0A1D5RLM8 5808 aa4,89□□□□□ -1,63
Cldnd1-201ENSMUST00000023426 AhnakE9Q616 5656 aaKnown RBP4,85□□□□□ -1,63
Cldnd1-201ENSMUST00000023426 Gm10229O08631 77 aa4,85□□□□□ -1,63
Cldnd1-201ENSMUST00000023426 Eppk1Q8R0W0 6548 aa4,74□□□□□ -1,65
Cldnd1-201ENSMUST00000023426 Gm29735A0A1B0GT06 219 aa4,63□□□□□ -1,67
Cldnd1-201ENSMUST00000023426 Gm11567Q9D141 195 aa4,56□□□□□ -1,68
Cldnd1-201ENSMUST00000023426 Krtap21-1Q925H4 128 aa4,52□□□□□ -1,69
Cldnd1-201ENSMUST00000023426 Phgr1Q8K0G7 91 aa4,37□□□□□ -1,71
Cldnd1-201ENSMUST00000023426 NebE9Q1W3 7152 aa4,33□□□□□ -1,72
Cldnd1-201ENSMUST00000023426 Gpr98Q8VHN7 6298 aaKnown RBP4,08□□□□□ -1,76
Cldnd1-201ENSMUST00000023426 Krtap6-2O08884 159 aa4,08□□□□□ -1,76
Cldnd1-201ENSMUST00000023426 Krtap31-2Q8CAY5 177 aa3,55□□□□□ -1,84
Cldnd1-201ENSMUST00000023426 Krtap5-1Q64507 230 aa3,55□□□□□ -1,84
Cldnd1-201ENSMUST00000023426 Gm4559A4IF42 199 aa3,45□□□□□ -1,86
Retrieved 80 of 22,080 RNA–protein pairs in 9,7 ms