RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Syne1Q6ZWR6 8799 aa7.73□□□□□ -1.17
Cldnd1-201ENSMUST00000023426 A0A1Y7VJ07 166 aa7.69□□□□□ -1.18
Cldnd1-201ENSMUST00000023426 Lce1fB9EJP6 147 aa7.69□□□□□ -1.18
Cldnd1-201ENSMUST00000023426 Lce1a1Q9CQH5 143 aa7.69□□□□□ -1.18
Cldnd1-201ENSMUST00000023426 Gm10142J3KMP7 120 aa7.65□□□□□ -1.18
Cldnd1-201ENSMUST00000023426 Krtap4-2B1AQ85 167 aa7.64□□□□□ -1.19
Cldnd1-201ENSMUST00000023426 Gm11596B1AQB0 205 aa7.62□□□□□ -1.19
Cldnd1-201ENSMUST00000023426 Lce1bQ9D149 137 aa7.58□□□□□ -1.2
Cldnd1-201ENSMUST00000023426 Gm11564A2A4L9 201 aa7.57□□□□□ -1.2
Cldnd1-201ENSMUST00000023426 Gm11595B1AQA7 289 aa7.57□□□□□ -1.2
Cldnd1-201ENSMUST00000023426 Krtap4-8B1AQA8 209 aa7.57□□□□□ -1.2
Cldnd1-201ENSMUST00000023426 Mt4P47945 62 aa7.53□□□□□ -1.2
Cldnd1-201ENSMUST00000023426 Gm38119A0A0A6YX29 146 aa7.48□□□□□ -1.21
Cldnd1-201ENSMUST00000023426 Lce3cQ91V05 98 aa7.47□□□□□ -1.21
Cldnd1-201ENSMUST00000023426 Lce3eF8VQJ0 98 aa7.44□□□□□ -1.22
Cldnd1-201ENSMUST00000023426 Lce3fQ6PAI4 98 aa7.44□□□□□ -1.22
Cldnd1-201ENSMUST00000023426 Sprr2hO70559 108 aa7.43□□□□□ -1.22
Cldnd1-201ENSMUST00000023426 Krtap4-9B1AQA9 244 aa7.41□□□□□ -1.22
Cldnd1-201ENSMUST00000023426 Lce3dE9Q8V1 98 aa7.39□□□□□ -1.23
Cldnd1-201ENSMUST00000023426 A030014E15RikA0A1Y7VJV2 120 aa7.36□□□□□ -1.23
Cldnd1-201ENSMUST00000023426 Syne2Q6ZWQ0 6874 aaKnown RBP7.36□□□□□ -1.23
Cldnd1-201ENSMUST00000023426 Sprr2iO70560 76 aa7.3□□□□□ -1.24
Cldnd1-201ENSMUST00000023426 Sprr2eO70556 76 aa7.24□□□□□ -1.25
Cldnd1-201ENSMUST00000023426 A030003K21RikA0A1Y7VIM3 128 aa7.23□□□□□ -1.25
Cldnd1-201ENSMUST00000023426 ObscnA2AAJ9 8891 aaKnown RBP7.2□□□□□ -1.26
Cldnd1-201ENSMUST00000023426 2300003K06RikA2A4M0 262 aa7.19□□□□□ -1.26
Cldnd1-201ENSMUST00000023426 Sprr2kO70562 68 aa7.18□□□□□ -1.26
Cldnd1-201ENSMUST00000023426 Fsip2A2ARZ3 6995 aa7.16□□□□□ -1.26
Cldnd1-201ENSMUST00000023426 Mt1P02802 61 aaKnown RBP7.13□□□□□ -1.27
Cldnd1-201ENSMUST00000023426 Krtap4-13Q9D7P3 165 aa7.13□□□□□ -1.27
Cldnd1-201ENSMUST00000023426 Lce3aQ497I5 98 aa7.13□□□□□ -1.27
Cldnd1-201ENSMUST00000023426 Lce1kJ3QP15 125 aa7.06□□□□□ -1.28
Cldnd1-201ENSMUST00000023426 Lce1lQ9D1G7 135 aa7.06□□□□□ -1.28
Cldnd1-201ENSMUST00000023426 Sprr2fO70557 76 aa6.95□□□□□ -1.3
Cldnd1-201ENSMUST00000023426 Gm6217A0A1Y7VJK9 128 aa6.82□□□□□ -1.32
Cldnd1-201ENSMUST00000023426 Gm11568A2A4M2 211 aa6.8□□□□□ -1.32
Cldnd1-201ENSMUST00000023426 Krtap9-1Q64526 186 aa6.8□□□□□ -1.32
Cldnd1-201ENSMUST00000023426 Krtap31-1Q9D644 177 aa6.79□□□□□ -1.32
Cldnd1-201ENSMUST00000023426 Krtap5-2Q9D5Z7 189 aa6.71□□□□□ -1.33
Cldnd1-201ENSMUST00000023426 Krtap20-2E9Q0A8 60 aa6.66□□□□□ -1.34
Cldnd1-201ENSMUST00000023426 A0A286YCP9 139 aa6.65□□□□□ -1.34
Cldnd1-201ENSMUST00000023426 Krtap6-3A0A087WQL6 57 aa6.55□□□□□ -1.36
Cldnd1-201ENSMUST00000023426 Gm10153A0A1B0GRL1 320 aa6.48□□□□□ -1.37
Cldnd1-201ENSMUST00000023426 Mt3P28184 68 aa6.34□□□□□ -1.39
Cldnd1-201ENSMUST00000023426 Krtap4-16Q91W93 202 aa6.32□□□□□ -1.4
Cldnd1-201ENSMUST00000023426 Gm10024A0A0A0MQA4 119 aa6.29□□□□□ -1.4
Cldnd1-201ENSMUST00000023426 Gm45337A0A1B0GS71 263 aa6.14□□□□□ -1.43
Cldnd1-201ENSMUST00000023426 Gm4553A0A1B0GSA9 284 aa6.13□□□□□ -1.43
Cldnd1-201ENSMUST00000023426 Gm11559Q9D3H7 191 aa6.03□□□□□ -1.44
Cldnd1-201ENSMUST00000023426 Gm40460A0A1B0GR10 244 aa5.98□□□□□ -1.45
Cldnd1-201ENSMUST00000023426 Gm7579A0A1B0GRJ4 243 aa5.98□□□□□ -1.45
Cldnd1-201ENSMUST00000023426 Krtap5-5Q2TA51 241 aa5.98□□□□□ -1.45
Cldnd1-201ENSMUST00000023426 Krtap5-4Q62220 223 aa5.98□□□□□ -1.45
Cldnd1-201ENSMUST00000023426 Macf1Q9QXZ0 7354 aaKnown RBP5.92□□□□□ -1.46
Cldnd1-201ENSMUST00000023426 Gm2431E9Q8S1 172 aa5.9□□□□□ -1.46
Cldnd1-201ENSMUST00000023426 Hmcn1D3YXG0 5634 aa5.84□□□□□ -1.47
Cldnd1-201ENSMUST00000023426 Gm11554B1AQB2 190 aa5.74□□□□□ -1.49
Cldnd1-201ENSMUST00000023426 Kmt2dQ6PDK2 5588 aa5.57□□□□□ -1.52
Cldnd1-201ENSMUST00000023426 1110025L11RikO09048 78 aa5.49□□□□□ -1.53
Cldnd1-201ENSMUST00000023426 Krtap6-5Q925H3 78 aa5.49□□□□□ -1.53
Cldnd1-201ENSMUST00000023426 Gm39115A0A1B0GSH7 232 aa5.46□□□□□ -1.54
Cldnd1-201ENSMUST00000023426 Muc16A0A140LJ72 8478 aa5.46□□□□□ -1.54
Cldnd1-201ENSMUST00000023426 Gm45618A0A1B0GSA0 219 aa5.25□□□□□ -1.57
Cldnd1-201ENSMUST00000023426 Sprr2bO70554 98 aa5.12□□□□□ -1.59
Cldnd1-201ENSMUST00000023426 Muc19Q6PZE0 7524 aa5.06□□□□□ -1.6
Cldnd1-201ENSMUST00000023426 DstQ91ZU6 7393 aaKnown RBP5.06□□□□□ -1.6
Cldnd1-201ENSMUST00000023426 Gm11639A0A1D5RLM8 5808 aa4.89□□□□□ -1.63
Cldnd1-201ENSMUST00000023426 AhnakE9Q616 5656 aaKnown RBP4.85□□□□□ -1.63
Cldnd1-201ENSMUST00000023426 Gm10229O08631 77 aa4.85□□□□□ -1.63
Cldnd1-201ENSMUST00000023426 Eppk1Q8R0W0 6548 aa4.74□□□□□ -1.65
Cldnd1-201ENSMUST00000023426 Gm29735A0A1B0GT06 219 aa4.63□□□□□ -1.67
Cldnd1-201ENSMUST00000023426 Gm11567Q9D141 195 aa4.56□□□□□ -1.68
Cldnd1-201ENSMUST00000023426 Krtap21-1Q925H4 128 aa4.52□□□□□ -1.69
Cldnd1-201ENSMUST00000023426 Phgr1Q8K0G7 91 aa4.37□□□□□ -1.71
Cldnd1-201ENSMUST00000023426 NebE9Q1W3 7152 aa4.33□□□□□ -1.72
Cldnd1-201ENSMUST00000023426 Gpr98Q8VHN7 6298 aaKnown RBP4.08□□□□□ -1.76
Cldnd1-201ENSMUST00000023426 Krtap6-2O08884 159 aa4.08□□□□□ -1.76
Cldnd1-201ENSMUST00000023426 Krtap31-2Q8CAY5 177 aa3.55□□□□□ -1.84
Cldnd1-201ENSMUST00000023426 Krtap5-1Q64507 230 aa3.55□□□□□ -1.84
Cldnd1-201ENSMUST00000023426 Gm4559A4IF42 199 aa3.45□□□□□ -1.86
Retrieved 80 of 22,080 RNA–protein pairs in 79.9 ms