RNA–Protein interactions for RNA: ENSMUST00000013995.12

Abca4-201, Transcript of Retinal-specific ATP-binding cassette transporter, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Abca4, Length 7,263 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4-201ENSMUST00000013995 Lce1cQ9D1C5 147 aa2.55□□□□□ -2
Abca4-201ENSMUST00000013995 Lce1dQ9D731 133 aa2.55□□□□□ -2
Abca4-201ENSMUST00000013995 Sprr2eO70556 76 aa2.54□□□□□ -2
Abca4-201ENSMUST00000013995 Mdn1A2ANY6 5589 aaKnown RBP2.52□□□□□ -2.01
Abca4-201ENSMUST00000013995 Gm10024A0A0A0MQA4 119 aa2.5□□□□□ -2.01
Abca4-201ENSMUST00000013995 Gm11596B1AQB0 205 aa2.5□□□□□ -2.01
Abca4-201ENSMUST00000013995 Lce1eQ9D139 143 aa2.48□□□□□ -2.01
Abca4-201ENSMUST00000013995 Krtap4-1Q3UUY3 169 aa2.44□□□□□ -2.02
Abca4-201ENSMUST00000013995 Gm11564A2A4L9 201 aa2.41□□□□□ -2.02
Abca4-201ENSMUST00000013995 Gm11563B1AQ90 168 aa2.41□□□□□ -2.02
Abca4-201ENSMUST00000013995 Gm11595B1AQA7 289 aa2.41□□□□□ -2.02
Abca4-201ENSMUST00000013995 Krtap4-8B1AQA8 209 aa2.41□□□□□ -2.02
Abca4-201ENSMUST00000013995 Krtap4-9B1AQA9 244 aa2.4□□□□□ -2.03
Abca4-201ENSMUST00000013995 Krtap4-7Q9D732 168 aa2.39□□□□□ -2.03
Abca4-201ENSMUST00000013995 2300003K06RikA2A4M0 262 aa2.39□□□□□ -2.03
Abca4-201ENSMUST00000013995 Sprr2hO70559 108 aa2.38□□□□□ -2.03
Abca4-201ENSMUST00000013995 Krtap4-13Q9D7P3 165 aa2.35□□□□□ -2.03
Abca4-201ENSMUST00000013995 Lce1a1Q9CQH5 143 aa2.3□□□□□ -2.04
Abca4-201ENSMUST00000013995 Krtap31-1Q9D644 177 aa2.26□□□□□ -2.05
Abca4-201ENSMUST00000013995 Krtap31-2Q8CAY5 177 aa2.24□□□□□ -2.05
Abca4-201ENSMUST00000013995 Gm11555B1AQ89 175 aa2.22□□□□□ -2.05
Abca4-201ENSMUST00000013995 Syne1Q6ZWR6 8799 aa2.21□□□□□ -2.06
Abca4-201ENSMUST00000013995 Lce1kJ3QP15 125 aa2.21□□□□□ -2.06
Abca4-201ENSMUST00000013995 Syne2Q6ZWQ0 6874 aaKnown RBP2.19□□□□□ -2.06
Abca4-201ENSMUST00000013995 Mt1P02802 61 aaKnown RBP2.19□□□□□ -2.06
Abca4-201ENSMUST00000013995 Krtap6-3A0A087WQL6 57 aa2.17□□□□□ -2.06
Abca4-201ENSMUST00000013995 Gm11554B1AQB2 190 aa2.17□□□□□ -2.06
Abca4-201ENSMUST00000013995 Sprr2bO70554 98 aa2.16□□□□□ -2.06
Abca4-201ENSMUST00000013995 Fsip2A2ARZ3 6995 aa2.16□□□□□ -2.06
Abca4-201ENSMUST00000013995 ObscnA2AAJ9 8891 aaKnown RBP2.16□□□□□ -2.06
Abca4-201ENSMUST00000013995 Mt3P28184 68 aa2.11□□□□□ -2.07
Abca4-201ENSMUST00000013995 Krtap4-16Q91W93 202 aa2.09□□□□□ -2.08
Abca4-201ENSMUST00000013995 Krtap20-2E9Q0A8 60 aa2.02□□□□□ -2.09
Abca4-201ENSMUST00000013995 Gm11568A2A4M2 211 aa1.91□□□□□ -2.1
Abca4-201ENSMUST00000013995 Krtap9-1Q64526 186 aa1.91□□□□□ -2.1
Abca4-201ENSMUST00000013995 Krtap5-2Q9D5Z7 189 aa1.87□□□□□ -2.11
Abca4-201ENSMUST00000013995 Muc16A0A140LJ72 8478 aa1.8□□□□□ -2.12
Abca4-201ENSMUST00000013995 Eppk1Q8R0W0 6548 aa1.79□□□□□ -2.12
Abca4-201ENSMUST00000013995 Macf1Q9QXZ0 7354 aaKnown RBP1.78□□□□□ -2.13
Abca4-201ENSMUST00000013995 Gm11559Q9D3H7 191 aa1.77□□□□□ -2.13
Abca4-201ENSMUST00000013995 1110025L11RikO09048 78 aa1.75□□□□□ -2.13
Abca4-201ENSMUST00000013995 Krtap6-5Q925H3 78 aa1.75□□□□□ -2.13
Abca4-201ENSMUST00000013995 Gm10153A0A1B0GRL1 320 aa1.74□□□□□ -2.13
Abca4-201ENSMUST00000013995 A0A1Y7VJH8 109 aa1.73□□□□□ -2.13
Abca4-201ENSMUST00000013995 Gm4553A0A1B0GSA9 284 aa1.72□□□□□ -2.13
Abca4-201ENSMUST00000013995 Gm45337A0A1B0GS71 263 aa1.66□□□□□ -2.14
Abca4-201ENSMUST00000013995 DstQ91ZU6 7393 aaKnown RBP1.66□□□□□ -2.14
Abca4-201ENSMUST00000013995 Kmt2dQ6PDK2 5588 aa1.65□□□□□ -2.15
Abca4-201ENSMUST00000013995 Gm40460A0A1B0GR10 244 aa1.64□□□□□ -2.15
Abca4-201ENSMUST00000013995 Gm7579A0A1B0GRJ4 243 aa1.64□□□□□ -2.15
Abca4-201ENSMUST00000013995 Krtap5-5Q2TA51 241 aa1.64□□□□□ -2.15
Abca4-201ENSMUST00000013995 Krtap5-4Q62220 223 aa1.64□□□□□ -2.15
Abca4-201ENSMUST00000013995 Gm2431E9Q8S1 172 aa1.62□□□□□ -2.15
Abca4-201ENSMUST00000013995 NebE9Q1W3 7152 aa1.61□□□□□ -2.15
Abca4-201ENSMUST00000013995 Hmcn1D3YXG0 5634 aa1.6□□□□□ -2.15
Abca4-201ENSMUST00000013995 Gm10229O08631 77 aa1.58□□□□□ -2.16
Abca4-201ENSMUST00000013995 A0A1Y7VLE6 161 aa1.54□□□□□ -2.16
Abca4-201ENSMUST00000013995 A030005L19RikA0A1Y7VIU2 113 aa1.52□□□□□ -2.17
Abca4-201ENSMUST00000013995 Gpr98Q8VHN7 6298 aaKnown RBP1.51□□□□□ -2.17
Abca4-201ENSMUST00000013995 Muc19Q6PZE0 7524 aa1.5□□□□□ -2.17
Abca4-201ENSMUST00000013995 Gm39115A0A1B0GSH7 232 aa1.49□□□□□ -2.17
Abca4-201ENSMUST00000013995 Gm11639A0A1D5RLM8 5808 aa1.46□□□□□ -2.18
Abca4-201ENSMUST00000013995 Phgr1Q8K0G7 91 aa1.43□□□□□ -2.18
Abca4-201ENSMUST00000013995 AhnakE9Q616 5656 aaKnown RBP1.43□□□□□ -2.18
Abca4-201ENSMUST00000013995 Krtap21-1Q925H4 128 aa1.37□□□□□ -2.19
Abca4-201ENSMUST00000013995 Krtap28-10A0A1Y7VP58 119 aa1.32□□□□□ -2.2
Abca4-201ENSMUST00000013995 Krtap6-2O08884 159 aa1.31□□□□□ -2.2
Abca4-201ENSMUST00000013995 A030005K14RikA0A1Y7VNY1 122 aa1.28□□□□□ -2.2
Abca4-201ENSMUST00000013995 Krtap28-13A0A087WQP5 138 aa1.28□□□□□ -2.2
Abca4-201ENSMUST00000013995 Gm11567Q9D141 195 aa1.28□□□□□ -2.2
Abca4-201ENSMUST00000013995 Gm45618A0A1B0GSA0 219 aa1.27□□□□□ -2.21
Abca4-201ENSMUST00000013995 A030003K21RikA0A1Y7VIM3 128 aa1.26□□□□□ -2.21
Abca4-201ENSMUST00000013995 Gm29735A0A1B0GT06 219 aa1.25□□□□□ -2.21
Abca4-201ENSMUST00000013995 Gm7544A0A1Y7VJ58 118 aa1.23□□□□□ -2.21
Abca4-201ENSMUST00000013995 Gm6217A0A1Y7VJK9 128 aa1.2□□□□□ -2.22
Abca4-201ENSMUST00000013995 A0A1Y7VJ07 166 aa1.16□□□□□ -2.22
Abca4-201ENSMUST00000013995 A0A286YCP9 139 aa1.07□□□□□ -2.24
Abca4-201ENSMUST00000013995 A030014E15RikA0A1Y7VJV2 120 aa1.03□□□□□ -2.25
Abca4-201ENSMUST00000013995 Krtap5-1Q64507 230 aa0.77□□□□□ -2.29
Abca4-201ENSMUST00000013995 Gm4559A4IF42 199 aa0.67□□□□□ -2.3
Retrieved 80 of 22,080 RNA–protein pairs in 85.6 ms