RNA–Protein interactions for RNA: ENSMUST00000002678.9

Tgfb1-201, Transcript of Transforming growth factor beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tgfb1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1-201ENSMUST00000002678 Krtap4-7Q9D732 168 aa5.71□□□□□ -1.5
Tgfb1-201ENSMUST00000002678 Fsip2A2ARZ3 6995 aa5.7□□□□□ -1.5
Tgfb1-201ENSMUST00000002678 Lce1bQ9D149 137 aa5.68□□□□□ -1.5
Tgfb1-201ENSMUST00000002678 Lce1fB9EJP6 147 aa5.67□□□□□ -1.5
Tgfb1-201ENSMUST00000002678 Lce1a1Q9CQH5 143 aa5.67□□□□□ -1.5
Tgfb1-201ENSMUST00000002678 Gm38119A0A0A6YX29 146 aa5.64□□□□□ -1.51
Tgfb1-201ENSMUST00000002678 Syne1Q6ZWR6 8799 aa5.64□□□□□ -1.51
Tgfb1-201ENSMUST00000002678 Gm10142J3KMP7 120 aa5.63□□□□□ -1.51
Tgfb1-201ENSMUST00000002678 Krtap4-13Q9D7P3 165 aa5.53□□□□□ -1.52
Tgfb1-201ENSMUST00000002678 Sprr2iO70560 76 aa5.5□□□□□ -1.53
Tgfb1-201ENSMUST00000002678 Sprr2hO70559 108 aa5.49□□□□□ -1.53
Tgfb1-201ENSMUST00000002678 2300003K06RikA2A4M0 262 aa5.47□□□□□ -1.53
Tgfb1-201ENSMUST00000002678 Sprr2kO70562 68 aa5.47□□□□□ -1.53
Tgfb1-201ENSMUST00000002678 Lce3cQ91V05 98 aa5.47□□□□□ -1.53
Tgfb1-201ENSMUST00000002678 Lce3dE9Q8V1 98 aa5.43□□□□□ -1.54
Tgfb1-201ENSMUST00000002678 Sprr2eO70556 76 aa5.39□□□□□ -1.55
Tgfb1-201ENSMUST00000002678 Lce3eF8VQJ0 98 aa5.38□□□□□ -1.55
Tgfb1-201ENSMUST00000002678 Lce3fQ6PAI4 98 aa5.38□□□□□ -1.55
Tgfb1-201ENSMUST00000002678 ObscnA2AAJ9 8891 aaKnown RBP5.25□□□□□ -1.57
Tgfb1-201ENSMUST00000002678 Sprr2fO70557 76 aa5.23□□□□□ -1.57
Tgfb1-201ENSMUST00000002678 Lce3aQ497I5 98 aa5.23□□□□□ -1.57
Tgfb1-201ENSMUST00000002678 Krtap6-3A0A087WQL6 57 aa5.21□□□□□ -1.58
Tgfb1-201ENSMUST00000002678 Lce1lQ9D1G7 135 aa5.19□□□□□ -1.58
Tgfb1-201ENSMUST00000002678 A0A1Y7VJH8 109 aa5.19□□□□□ -1.58
Tgfb1-201ENSMUST00000002678 Lce1kJ3QP15 125 aa5.19□□□□□ -1.58
Tgfb1-201ENSMUST00000002678 Mt1P02802 61 aaKnown RBP5.12□□□□□ -1.59
Tgfb1-201ENSMUST00000002678 Krtap31-1Q9D644 177 aa5.08□□□□□ -1.6
Tgfb1-201ENSMUST00000002678 Krtap20-2E9Q0A8 60 aa5.05□□□□□ -1.6
Tgfb1-201ENSMUST00000002678 Gm11568A2A4M2 211 aa5.04□□□□□ -1.6
Tgfb1-201ENSMUST00000002678 Krtap9-1Q64526 186 aa5.04□□□□□ -1.6
Tgfb1-201ENSMUST00000002678 Krtap31-2Q8CAY5 177 aa5.01□□□□□ -1.61
Tgfb1-201ENSMUST00000002678 Krtap5-2Q9D5Z7 189 aa5.01□□□□□ -1.61
Tgfb1-201ENSMUST00000002678 Gm10153A0A1B0GRL1 320 aa4.74□□□□□ -1.65
Tgfb1-201ENSMUST00000002678 Krtap4-16Q91W93 202 aa4.74□□□□□ -1.65
Tgfb1-201ENSMUST00000002678 Macf1Q9QXZ0 7354 aaKnown RBP4.69□□□□□ -1.66
Tgfb1-201ENSMUST00000002678 Gm4553A0A1B0GSA9 284 aa4.63□□□□□ -1.67
Tgfb1-201ENSMUST00000002678 Gm11559Q9D3H7 191 aa4.62□□□□□ -1.67
Tgfb1-201ENSMUST00000002678 Gm10024A0A0A0MQA4 119 aa4.58□□□□□ -1.68
Tgfb1-201ENSMUST00000002678 Gm45337A0A1B0GS71 263 aa4.57□□□□□ -1.68
Tgfb1-201ENSMUST00000002678 Hmcn1D3YXG0 5634 aa4.54□□□□□ -1.68
Tgfb1-201ENSMUST00000002678 Mt3P28184 68 aa4.54□□□□□ -1.68
Tgfb1-201ENSMUST00000002678 A0A1Y7VLE6 161 aa4.53□□□□□ -1.68
Tgfb1-201ENSMUST00000002678 Gm11554B1AQB2 190 aa4.5□□□□□ -1.69
Tgfb1-201ENSMUST00000002678 Gm2431E9Q8S1 172 aa4.5□□□□□ -1.69
Tgfb1-201ENSMUST00000002678 Kmt2dQ6PDK2 5588 aa4.45□□□□□ -1.7
Tgfb1-201ENSMUST00000002678 Gm40460A0A1B0GR10 244 aa4.43□□□□□ -1.7
Tgfb1-201ENSMUST00000002678 Gm7579A0A1B0GRJ4 243 aa4.43□□□□□ -1.7
Tgfb1-201ENSMUST00000002678 Krtap5-5Q2TA51 241 aa4.43□□□□□ -1.7
Tgfb1-201ENSMUST00000002678 Krtap5-4Q62220 223 aa4.43□□□□□ -1.7
Tgfb1-201ENSMUST00000002678 Krtap28-13A0A087WQP5 138 aa4.4□□□□□ -1.7
Tgfb1-201ENSMUST00000002678 A030005K14RikA0A1Y7VNY1 122 aa4.4□□□□□ -1.7
Tgfb1-201ENSMUST00000002678 Krtap28-10A0A1Y7VP58 119 aa4.31□□□□□ -1.72
Tgfb1-201ENSMUST00000002678 A030005L19RikA0A1Y7VIU2 113 aa4.31□□□□□ -1.72
Tgfb1-201ENSMUST00000002678 Eppk1Q8R0W0 6548 aa4.14□□□□□ -1.75
Tgfb1-201ENSMUST00000002678 Gm39115A0A1B0GSH7 232 aa4.13□□□□□ -1.75
Tgfb1-201ENSMUST00000002678 A0A1Y7VJ07 166 aa4.04□□□□□ -1.76
Tgfb1-201ENSMUST00000002678 Muc19Q6PZE0 7524 aa4.02□□□□□ -1.77
Tgfb1-201ENSMUST00000002678 DstQ91ZU6 7393 aaKnown RBP4.01□□□□□ -1.77
Tgfb1-201ENSMUST00000002678 Muc16A0A140LJ72 8478 aa3.99□□□□□ -1.77
Tgfb1-201ENSMUST00000002678 A030014E15RikA0A1Y7VJV2 120 aa3.99□□□□□ -1.77
Tgfb1-201ENSMUST00000002678 Gm11639A0A1D5RLM8 5808 aa3.98□□□□□ -1.77
Tgfb1-201ENSMUST00000002678 1110025L11RikO09048 78 aa3.96□□□□□ -1.78
Tgfb1-201ENSMUST00000002678 Krtap6-5Q925H3 78 aa3.96□□□□□ -1.78
Tgfb1-201ENSMUST00000002678 Gm7544A0A1Y7VJ58 118 aa3.95□□□□□ -1.78
Tgfb1-201ENSMUST00000002678 AhnakE9Q616 5656 aaKnown RBP3.8□□□□□ -1.8
Tgfb1-201ENSMUST00000002678 Sprr2bO70554 98 aa3.75□□□□□ -1.81
Tgfb1-201ENSMUST00000002678 Gm45618A0A1B0GSA0 219 aa3.66□□□□□ -1.82
Tgfb1-201ENSMUST00000002678 NebE9Q1W3 7152 aa3.61□□□□□ -1.83
Tgfb1-201ENSMUST00000002678 Gpr98Q8VHN7 6298 aaKnown RBP3.6□□□□□ -1.83
Tgfb1-201ENSMUST00000002678 A030003K21RikA0A1Y7VIM3 128 aa3.51□□□□□ -1.85
Tgfb1-201ENSMUST00000002678 Gm10229O08631 77 aa3.49□□□□□ -1.85
Tgfb1-201ENSMUST00000002678 A0A286YCP9 139 aa3.43□□□□□ -1.86
Tgfb1-201ENSMUST00000002678 Gm6217A0A1Y7VJK9 128 aa3.41□□□□□ -1.86
Tgfb1-201ENSMUST00000002678 Gm11567Q9D141 195 aa3.34□□□□□ -1.87
Tgfb1-201ENSMUST00000002678 Gm29735A0A1B0GT06 219 aa3.32□□□□□ -1.88
Tgfb1-201ENSMUST00000002678 Krtap21-1Q925H4 128 aa3.27□□□□□ -1.89
Tgfb1-201ENSMUST00000002678 Phgr1Q8K0G7 91 aa3.23□□□□□ -1.89
Tgfb1-201ENSMUST00000002678 Krtap6-2O08884 159 aa2.92□□□□□ -1.94
Tgfb1-201ENSMUST00000002678 Krtap5-1Q64507 230 aa2.19□□□□□ -2.06
Tgfb1-201ENSMUST00000002678 Gm4559A4IF42 199 aa1.93□□□□□ -2.1
Retrieved 80 of 22,080 RNA–protein pairs in 81.7 ms