RNA–Protein interactions for RNA: ENSMUST00000000500.6

Pdgfb-201, Transcript of Platelet-derived growth factor subunit B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfb, Length 2,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfb-201ENSMUST00000000500 ObscnA2AAJ9 8891 aaKnown RBP6.64□□□□□ -1.35
Pdgfb-201ENSMUST00000000500 Fsip2A2ARZ3 6995 aa6.61□□□□□ -1.35
Pdgfb-201ENSMUST00000000500 Krtap4-1Q3UUY3 169 aa6.56□□□□□ -1.36
Pdgfb-201ENSMUST00000000500 Gm38119A0A0A6YX29 146 aa6.55□□□□□ -1.36
Pdgfb-201ENSMUST00000000500 Lce3aQ497I5 98 aa6.55□□□□□ -1.36
Pdgfb-201ENSMUST00000000500 Sprr2eO70556 76 aa6.51□□□□□ -1.37
Pdgfb-201ENSMUST00000000500 2300003K06RikA2A4M0 262 aa6.46□□□□□ -1.38
Pdgfb-201ENSMUST00000000500 Mt4P47945 62 aa6.44□□□□□ -1.38
Pdgfb-201ENSMUST00000000500 Sprr2fO70557 76 aa6.43□□□□□ -1.38
Pdgfb-201ENSMUST00000000500 Gm11555B1AQ89 175 aa6.37□□□□□ -1.39
Pdgfb-201ENSMUST00000000500 Syne2Q6ZWQ0 6874 aaKnown RBP6.32□□□□□ -1.4
Pdgfb-201ENSMUST00000000500 Sprr2kO70562 68 aa6.31□□□□□ -1.4
Pdgfb-201ENSMUST00000000500 Gm11564A2A4L9 201 aa6.29□□□□□ -1.4
Pdgfb-201ENSMUST00000000500 Gm11563B1AQ90 168 aa6.29□□□□□ -1.4
Pdgfb-201ENSMUST00000000500 Gm11595B1AQA7 289 aa6.29□□□□□ -1.4
Pdgfb-201ENSMUST00000000500 Krtap4-8B1AQA8 209 aa6.29□□□□□ -1.4
Pdgfb-201ENSMUST00000000500 Lce1gQ9D195 139 aa6.28□□□□□ -1.4
Pdgfb-201ENSMUST00000000500 Krtap4-16Q91W93 202 aa6.24□□□□□ -1.41
Pdgfb-201ENSMUST00000000500 Krtap4-9B1AQA9 244 aa6.23□□□□□ -1.41
Pdgfb-201ENSMUST00000000500 Gm11596B1AQB0 205 aa6.21□□□□□ -1.42
Pdgfb-201ENSMUST00000000500 Lce1bQ9D149 137 aa6.2□□□□□ -1.42
Pdgfb-201ENSMUST00000000500 Lce1lQ9D1G7 135 aa6.18□□□□□ -1.42
Pdgfb-201ENSMUST00000000500 Krtap4-2B1AQ85 167 aa6.18□□□□□ -1.42
Pdgfb-201ENSMUST00000000500 Mt1P02802 61 aaKnown RBP6.12□□□□□ -1.43
Pdgfb-201ENSMUST00000000500 Lce1kJ3QP15 125 aa6.12□□□□□ -1.43
Pdgfb-201ENSMUST00000000500 Krtap4-13Q9D7P3 165 aa6.05□□□□□ -1.44
Pdgfb-201ENSMUST00000000500 Muc16A0A140LJ72 8478 aa5.98□□□□□ -1.45
Pdgfb-201ENSMUST00000000500 Krtap4-7Q9D732 168 aa5.83□□□□□ -1.48
Pdgfb-201ENSMUST00000000500 Gm11568A2A4M2 211 aa5.75□□□□□ -1.49
Pdgfb-201ENSMUST00000000500 Krtap9-1Q64526 186 aa5.75□□□□□ -1.49
Pdgfb-201ENSMUST00000000500 Gm10024A0A0A0MQA4 119 aa5.72□□□□□ -1.49
Pdgfb-201ENSMUST00000000500 Macf1Q9QXZ0 7354 aaKnown RBP5.68□□□□□ -1.5
Pdgfb-201ENSMUST00000000500 Krtap20-2E9Q0A8 60 aa5.66□□□□□ -1.5
Pdgfb-201ENSMUST00000000500 A0A1Y7VJH8 109 aa5.57□□□□□ -1.52
Pdgfb-201ENSMUST00000000500 Krtap5-2Q9D5Z7 189 aa5.38□□□□□ -1.55
Pdgfb-201ENSMUST00000000500 Mt3P28184 68 aa5.36□□□□□ -1.55
Pdgfb-201ENSMUST00000000500 Gm10153A0A1B0GRL1 320 aa5.33□□□□□ -1.56
Pdgfb-201ENSMUST00000000500 A0A1Y7VLE6 161 aa5.32□□□□□ -1.56
Pdgfb-201ENSMUST00000000500 Kmt2dQ6PDK2 5588 aa5.28□□□□□ -1.56
Pdgfb-201ENSMUST00000000500 Hmcn1D3YXG0 5634 aa5.23□□□□□ -1.57
Pdgfb-201ENSMUST00000000500 Krtap6-3A0A087WQL6 57 aa5.08□□□□□ -1.6
Pdgfb-201ENSMUST00000000500 Muc19Q6PZE0 7524 aa5.01□□□□□ -1.61
Pdgfb-201ENSMUST00000000500 Gm11554B1AQB2 190 aa4.93□□□□□ -1.62
Pdgfb-201ENSMUST00000000500 Gm45337A0A1B0GS71 263 aa4.85□□□□□ -1.63
Pdgfb-201ENSMUST00000000500 Gm4553A0A1B0GSA9 284 aa4.84□□□□□ -1.63
Pdgfb-201ENSMUST00000000500 Gm11559Q9D3H7 191 aa4.83□□□□□ -1.64
Pdgfb-201ENSMUST00000000500 Gm2431E9Q8S1 172 aa4.77□□□□□ -1.65
Pdgfb-201ENSMUST00000000500 1110025L11RikO09048 78 aa4.75□□□□□ -1.65
Pdgfb-201ENSMUST00000000500 Krtap6-5Q925H3 78 aa4.75□□□□□ -1.65
Pdgfb-201ENSMUST00000000500 Gm40460A0A1B0GR10 244 aa4.69□□□□□ -1.66
Pdgfb-201ENSMUST00000000500 Gm7579A0A1B0GRJ4 243 aa4.69□□□□□ -1.66
Pdgfb-201ENSMUST00000000500 Krtap5-5Q2TA51 241 aa4.69□□□□□ -1.66
Pdgfb-201ENSMUST00000000500 Krtap5-4Q62220 223 aa4.69□□□□□ -1.66
Pdgfb-201ENSMUST00000000500 DstQ91ZU6 7393 aaKnown RBP4.56□□□□□ -1.68
Pdgfb-201ENSMUST00000000500 Gm11639A0A1D5RLM8 5808 aa4.37□□□□□ -1.71
Pdgfb-201ENSMUST00000000500 Sprr2bO70554 98 aa4.32□□□□□ -1.72
Pdgfb-201ENSMUST00000000500 Gm39115A0A1B0GSH7 232 aa4.2□□□□□ -1.74
Pdgfb-201ENSMUST00000000500 Gm10229O08631 77 aa4.19□□□□□ -1.74
Pdgfb-201ENSMUST00000000500 AhnakE9Q616 5656 aaKnown RBP4.17□□□□□ -1.74
Pdgfb-201ENSMUST00000000500 A0A1Y7VJ07 166 aa4.11□□□□□ -1.75
Pdgfb-201ENSMUST00000000500 NebE9Q1W3 7152 aa4.09□□□□□ -1.75
Pdgfb-201ENSMUST00000000500 Phgr1Q8K0G7 91 aa3.96□□□□□ -1.78
Pdgfb-201ENSMUST00000000500 A030005L19RikA0A1Y7VIU2 113 aa3.94□□□□□ -1.78
Pdgfb-201ENSMUST00000000500 Gm11567Q9D141 195 aa3.92□□□□□ -1.78
Pdgfb-201ENSMUST00000000500 Krtap21-1Q925H4 128 aa3.91□□□□□ -1.78
Pdgfb-201ENSMUST00000000500 A0A286YCP9 139 aa3.87□□□□□ -1.79
Pdgfb-201ENSMUST00000000500 Eppk1Q8R0W0 6548 aa3.84□□□□□ -1.8
Pdgfb-201ENSMUST00000000500 Gm29735A0A1B0GT06 219 aa3.57□□□□□ -1.84
Pdgfb-201ENSMUST00000000500 Gm7544A0A1Y7VJ58 118 aa3.52□□□□□ -1.85
Pdgfb-201ENSMUST00000000500 Krtap28-10A0A1Y7VP58 119 aa3.5□□□□□ -1.85
Pdgfb-201ENSMUST00000000500 Krtap6-2O08884 159 aa3.5□□□□□ -1.85
Pdgfb-201ENSMUST00000000500 Gpr98Q8VHN7 6298 aaKnown RBP3.41□□□□□ -1.86
Pdgfb-201ENSMUST00000000500 Gm45618A0A1B0GSA0 219 aa3.4□□□□□ -1.86
Pdgfb-201ENSMUST00000000500 A030005K14RikA0A1Y7VNY1 122 aa3.25□□□□□ -1.89
Pdgfb-201ENSMUST00000000500 A030003K21RikA0A1Y7VIM3 128 aa3.13□□□□□ -1.91
Pdgfb-201ENSMUST00000000500 Gm6217A0A1Y7VJK9 128 aa3.13□□□□□ -1.91
Pdgfb-201ENSMUST00000000500 Krtap28-13A0A087WQP5 138 aa3.11□□□□□ -1.91
Pdgfb-201ENSMUST00000000500 A030014E15RikA0A1Y7VJV2 120 aa2.31□□□□□ -2.04
Pdgfb-201ENSMUST00000000500 Gm4559A4IF42 199 aa2.07□□□□□ -2.08
Pdgfb-201ENSMUST00000000500 Krtap5-1Q64507 230 aa2.06□□□□□ -2.08
Retrieved 80 of 22,080 RNA–protein pairs in 65.7 ms