RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 NEDD4P46934 1319 aa12.53□□□□□ -0.4
TNFRSF1A-211ENST00000538363 WDR90Q96KV7 1748 aa12.53□□□□□ -0.4
TNFRSF1A-211ENST00000538363 ORC4O43929 436 aa12.52□□□□□ -0.41
TNFRSF1A-211ENST00000538363 RASA3Q14644 834 aa12.52□□□□□ -0.41
TNFRSF1A-211ENST00000538363 CERKLQ49MI3 558 aaPredicted RBP12.52□□□□□ -0.41
TNFRSF1A-211ENST00000538363 C16orf86Q6ZW13 317 aa12.52□□□□□ -0.41
TNFRSF1A-211ENST00000538363 USP50Q70EL3 339 aaPredicted RBP12.52□□□□□ -0.41
TNFRSF1A-211ENST00000538363 PNMA8AQ86V59 439 aaPredicted RBP12.52□□□□□ -0.41
TNFRSF1A-211ENST00000538363 TRPM4Q8TD43 1214 aa12.52□□□□□ -0.41
TNFRSF1A-211ENST00000538363 ZNF526Q8TF50 670 aaPredicted RBP12.52□□□□□ -0.41
TNFRSF1A-211ENST00000538363 TBC1D2Q9BYX2 928 aa12.52□□□□□ -0.41
TNFRSF1A-211ENST00000538363 GGA3Q9NZ52 723 aa12.52□□□□□ -0.41
TNFRSF1A-211ENST00000538363 MKRN1Q9UHC7 482 aaKnown RBP12.52□□□□□ -0.41
TNFRSF1A-211ENST00000538363 CDK5RAP2Q96SN8 1893 aa12.52□□□□□ -0.41
TNFRSF1A-211ENST00000538363 SCN4AP35499 1836 aa12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 DDTLA6NHG4 134 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 NF2P35240 595 aa12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 SLC4A3P48751 1232 aa12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 ATP2B2Q01814 1243 aa12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 STK3Q13188 491 aa12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 SUPT20HL1Q3ZLR7 823 aa12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 PPP4R3BQ5MIZ7 849 aa12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 IFIT1BQ5T764 474 aaKnown RBP12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 DCAF15Q66K64 600 aa12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 CYB5R4Q7L1T6 521 aa12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 MB21D2Q8IYB1 491 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 SLC44A5Q8NCS7 719 aa12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 ZBED3Q96IU2 234 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 CCDC17Q96LX7 622 aa12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 ZSCAN10Q96SZ4 725 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 TMEM39BQ9GZU3 492 aa12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 NBPF3Q9H094 633 aa12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 DEFB129Q9H1M3 183 aa12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 SLKQ9H2G2 1235 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 SH2B1Q9NRF2 756 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 HERC5Q9UII4 1024 aaKnown RBP12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 SCAF8Q9UPN6 1271 aaKnown RBP12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 WDR19Q8NEZ3 1342 aa12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 LAMB1P07942 1786 aa12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 LAMA4Q16363 1823 aa12.51□□□□□ -0.41
TNFRSF1A-211ENST00000538363 KLF18A0A0U1RQI7 1052 aa12.5□□□□□ -0.41
TNFRSF1A-211ENST00000538363 RAD21O60216 631 aa12.5□□□□□ -0.41
TNFRSF1A-211ENST00000538363 EGFRP00533 1210 aa12.5□□□□□ -0.41
TNFRSF1A-211ENST00000538363 VEGFAP15692 232 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF1A-211ENST00000538363 MNX1P50219 401 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF1A-211ENST00000538363 VASPP50552 380 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF1A-211ENST00000538363 EXOSC10Q01780 885 aaKnown RBP12.5□□□□□ -0.41
TNFRSF1A-211ENST00000538363 APOBRQ0VD83 1088 aa12.5□□□□□ -0.41
TNFRSF1A-211ENST00000538363 TTLL12Q14166 644 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF1A-211ENST00000538363 MIGA2Q7L4E1 593 aa12.5□□□□□ -0.41
TNFRSF1A-211ENST00000538363 CATIPQ7Z7H3 387 aa12.5□□□□□ -0.41
TNFRSF1A-211ENST00000538363 IL17RAQ96F46 866 aa12.5□□□□□ -0.41
TNFRSF1A-211ENST00000538363 L3MBTL3Q96JM7 780 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF1A-211ENST00000538363 EHD4Q9H223 541 aa12.5□□□□□ -0.41
TNFRSF1A-211ENST00000538363 ALDH8A1Q9H2A2 487 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF1A-211ENST00000538363 KAT14Q9H8E8 782 aa12.5□□□□□ -0.41
TNFRSF1A-211ENST00000538363 RRAGCQ9HB90 399 aa12.5□□□□□ -0.41
TNFRSF1A-211ENST00000538363 TAOK2Q9UL54 1235 aa12.5□□□□□ -0.41
TNFRSF1A-211ENST00000538363 ISY1Q9ULR0 285 aaKnown RBP12.5□□□□□ -0.41
TNFRSF1A-211ENST00000538363 ANGEL1Q9UNK9 670 aaKnown RBP12.5□□□□□ -0.41
TNFRSF1A-211ENST00000538363 SLC12A7Q9Y666 1083 aa12.5□□□□□ -0.41
TNFRSF1A-211ENST00000538363 FOCADQ5VW36 1801 aa12.5□□□□□ -0.41
TNFRSF1A-211ENST00000538363 TNKSO95271 1327 aa12.49□□□□□ -0.41
TNFRSF1A-211ENST00000538363 FAM196BA6NMK8 535 aa12.49□□□□□ -0.41
TNFRSF1A-211ENST00000538363 CPLX1O14810 134 aa12.49□□□□□ -0.41
TNFRSF1A-211ENST00000538363 DHX16O60231 1041 aaKnown RBP12.49□□□□□ -0.41
TNFRSF1A-211ENST00000538363 ABCB5Q2M3G0 1257 aa12.49□□□□□ -0.41
TNFRSF1A-211ENST00000538363 CPLX2Q6PUV4 134 aaKnown RBP12.49□□□□□ -0.41
TNFRSF1A-211ENST00000538363 NUP133Q8WUM0 1156 aa12.49□□□□□ -0.41
TNFRSF1A-211ENST00000538363 MTA3Q9BTC8 594 aa12.49□□□□□ -0.41
TNFRSF1A-211ENST00000538363 STX8Q9UNK0 236 aa12.49□□□□□ -0.41
TNFRSF1A-211ENST00000538363 MTMR7Q9Y216 660 aa12.49□□□□□ -0.41
TNFRSF1A-211ENST00000538363 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.49□□□□□ -0.41
TNFRSF1A-211ENST00000538363 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF1A-211ENST00000538363 PPP2R3BQ9Y5P8 575 aa12.49□□□□□ -0.41
TNFRSF1A-211ENST00000538363 ASTN2O75129 1339 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF1A-211ENST00000538363 GOLGA8BA8MQT2 603 aa12.48□□□□□ -0.41
TNFRSF1A-211ENST00000538363 SMIM22K7EJ46 135 aa12.48□□□□□ -0.41
TNFRSF1A-211ENST00000538363 ZBTB43O43298 467 aa12.48□□□□□ -0.41
TNFRSF1A-211ENST00000538363 RASA1P20936 1047 aa12.48□□□□□ -0.41
TNFRSF1A-211ENST00000538363 C1QTNF8P60827 252 aa12.48□□□□□ -0.41
TNFRSF1A-211ENST00000538363 EVX2Q03828 476 aa12.48□□□□□ -0.41
TNFRSF1A-211ENST00000538363 RAB3GAP1Q15042 981 aa12.48□□□□□ -0.41
TNFRSF1A-211ENST00000538363 KRT26Q7Z3Y9 468 aa12.48□□□□□ -0.41
TNFRSF1A-211ENST00000538363 NEDD1Q8NHV4 660 aa12.48□□□□□ -0.41
TNFRSF1A-211ENST00000538363 ZC3H15Q8WU90 426 aaKnown RBP12.48□□□□□ -0.41
TNFRSF1A-211ENST00000538363 TMX3Q96JJ7 454 aa12.48□□□□□ -0.41
TNFRSF1A-211ENST00000538363 TTC14Q96N46 770 aa12.48□□□□□ -0.41
TNFRSF1A-211ENST00000538363 TAF1DQ9H5J8 278 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF1A-211ENST00000538363 MYH8P13535 1937 aa12.48□□□□□ -0.41
TNFRSF1A-211ENST00000538363 ROBO3Q96MS0 1386 aa12.47□□□□□ -0.41
TNFRSF1A-211ENST00000538363 PITPNM2Q9BZ72 1349 aa12.47□□□□□ -0.41
TNFRSF1A-211ENST00000538363 SH2B2O14492 632 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1A-211ENST00000538363 FGRP09769 529 aa12.47□□□□□ -0.41
TNFRSF1A-211ENST00000538363 CALM1P0DP23 149 aa12.47□□□□□ -0.41
TNFRSF1A-211ENST00000538363 CALM2P0DP24 149 aa12.47□□□□□ -0.41
TNFRSF1A-211ENST00000538363 CALM3P0DP25 149 aa12.47□□□□□ -0.41
TNFRSF1A-211ENST00000538363 HIRAP54198 1017 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1A-211ENST00000538363 ANTXR2P58335 489 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms