RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 ACSS3Q9H6R3 686 aa9.63□□□□□ -0.87
NEDD4-203ENST00000502612 SSU72Q9NP77 194 aaKnown RBP9.63□□□□□ -0.87
NEDD4-203ENST00000502612 DAGLAQ9Y4D2 1042 aa9.63□□□□□ -0.87
NEDD4-203ENST00000502612 DYNC1LI2O43237 492 aaPredicted RBP9.62□□□□□ -0.87
NEDD4-203ENST00000502612 NME1P15531 152 aaKnown RBP9.62□□□□□ -0.87
NEDD4-203ENST00000502612 USP11P51784 963 aa9.62□□□□□ -0.87
NEDD4-203ENST00000502612 CCDC144BQ3MJ40 725 aa9.62□□□□□ -0.87
NEDD4-203ENST00000502612 PRAMEF13Q5VWM6 474 aa9.62□□□□□ -0.87
NEDD4-203ENST00000502612 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.62□□□□□ -0.87
NEDD4-203ENST00000502612 CDC37L1Q7L3B6 337 aa9.62□□□□□ -0.87
NEDD4-203ENST00000502612 NLRC3Q7RTR2 1065 aa9.62□□□□□ -0.87
NEDD4-203ENST00000502612 MRPL41Q8IXM3 137 aaKnown RBP9.62□□□□□ -0.87
NEDD4-203ENST00000502612 CELF2-AS1Q8N7Q2 184 aa9.62□□□□□ -0.87
NEDD4-203ENST00000502612 XAGE3Q8WTP9 111 aa9.62□□□□□ -0.87
NEDD4-203ENST00000502612 SEMA6CQ9H3T2 930 aa9.62□□□□□ -0.87
NEDD4-203ENST00000502612 CNNM2Q9H8M5 875 aa9.62□□□□□ -0.87
NEDD4-203ENST00000502612 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.61□□□□□ -0.87
NEDD4-203ENST00000502612 A0A1W2PQH9 124 aa9.61□□□□□ -0.87
NEDD4-203ENST00000502612 C1QTNF9BB2RNN3 333 aa9.61□□□□□ -0.87
NEDD4-203ENST00000502612 NFICP08651 508 aa9.61□□□□□ -0.87
NEDD4-203ENST00000502612 MLECQ14165 292 aa9.61□□□□□ -0.87
NEDD4-203ENST00000502612 LRRFIP1Q32MZ4 808 aaKnown RBP9.61□□□□□ -0.87
NEDD4-203ENST00000502612 TTC6Q86TZ1 520 aa9.61□□□□□ -0.87
NEDD4-203ENST00000502612 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.61□□□□□ -0.87
NEDD4-203ENST00000502612 DZIP1LQ8IYY4 767 aaKnown RBP9.61□□□□□ -0.87
NEDD4-203ENST00000502612 MICAL1Q8TDZ2 1067 aa9.61□□□□□ -0.87
NEDD4-203ENST00000502612 UTP4Q969X6 686 aaKnown RBP9.61□□□□□ -0.87
NEDD4-203ENST00000502612 SLC9A7Q96T83 725 aa9.61□□□□□ -0.87
NEDD4-203ENST00000502612 PIF1Q9H611 641 aa9.61□□□□□ -0.87
NEDD4-203ENST00000502612 ACTR10Q9NZ32 417 aa9.61□□□□□ -0.87
NEDD4-203ENST00000502612 FAM181BA6NEQ2 426 aa9.6□□□□□ -0.87
NEDD4-203ENST00000502612 BMP3P12645 472 aa9.6□□□□□ -0.87
NEDD4-203ENST00000502612 GUCY2CP25092 1073 aa9.6□□□□□ -0.87
NEDD4-203ENST00000502612 SERINC3Q13530 473 aa9.6□□□□□ -0.87
NEDD4-203ENST00000502612 RAB33AQ14088 237 aa9.6□□□□□ -0.87
NEDD4-203ENST00000502612 TNNI3KQ59H18 835 aa9.6□□□□□ -0.87
NEDD4-203ENST00000502612 CDCP2Q5VXM1 449 aa9.6□□□□□ -0.87
NEDD4-203ENST00000502612 SLC6A19Q695T7 634 aa9.6□□□□□ -0.87
NEDD4-203ENST00000502612 ALYREFQ86V81 257 aaKnown RBP9.6□□□□□ -0.87
NEDD4-203ENST00000502612 MYRFLQ96LU7 910 aa9.6□□□□□ -0.87
NEDD4-203ENST00000502612 TM9SF2Q99805 663 aa9.6□□□□□ -0.87
NEDD4-203ENST00000502612 OSBPL2Q9H1P3 480 aa9.6□□□□□ -0.87
NEDD4-203ENST00000502612 ST7Q9NRC1 585 aa9.6□□□□□ -0.87
NEDD4-203ENST00000502612 LARP1BQ659C4 914 aaKnown RBP9.59□□□□□ -0.87
NEDD4-203ENST00000502612 ARMCX6Q7L4S7 300 aa9.59□□□□□ -0.87
NEDD4-203ENST00000502612 KIF2CQ99661 725 aa9.59□□□□□ -0.87
NEDD4-203ENST00000502612 TRIM55Q9BYV6 548 aa9.59□□□□□ -0.87
NEDD4-203ENST00000502612 PCOLCE2Q9UKZ9 415 aa9.59□□□□□ -0.87
NEDD4-203ENST00000502612 B2RBV5 119 aa9.58□□□□□ -0.88
NEDD4-203ENST00000502612 TNFRSF10CO14798 259 aa9.58□□□□□ -0.88
NEDD4-203ENST00000502612 CST3P01034 146 aaPredicted RBP9.58□□□□□ -0.88
NEDD4-203ENST00000502612 RAG1P15918 1043 aa9.58□□□□□ -0.88
NEDD4-203ENST00000502612 MAP4P27816 1152 aaKnown RBP9.58□□□□□ -0.88
NEDD4-203ENST00000502612 RXRBP28702 533 aa9.58□□□□□ -0.88
NEDD4-203ENST00000502612 GSK3AP49840 483 aa9.58□□□□□ -0.88
NEDD4-203ENST00000502612 YARSP54577 528 aaKnown RBP9.58□□□□□ -0.88
NEDD4-203ENST00000502612 CASP7P55210 303 aa9.58□□□□□ -0.88
NEDD4-203ENST00000502612 BMS1Q14692 1282 aaKnown RBP9.58□□□□□ -0.88
NEDD4-203ENST00000502612 UNC5AQ6ZN44 842 aa9.58□□□□□ -0.88
NEDD4-203ENST00000502612 SLFN12Q8IYM2 578 aa9.58□□□□□ -0.88
NEDD4-203ENST00000502612 BAHD1Q8TBE0 780 aaPredicted RBP9.58□□□□□ -0.88
NEDD4-203ENST00000502612 SSBP4Q9BWG4 385 aaPredicted RBP9.58□□□□□ -0.88
NEDD4-203ENST00000502612 ZSWIM4Q9H7M6 989 aa9.58□□□□□ -0.88
NEDD4-203ENST00000502612 STK17AQ9UEE5 414 aa9.58□□□□□ -0.88
NEDD4-203ENST00000502612 R3HCC1Q9Y3T6 440 aaKnown RBP9.58□□□□□ -0.88
NEDD4-203ENST00000502612 LTBP3Q9NS15 1303 aa9.57□□□□□ -0.88
NEDD4-203ENST00000502612 CDK5R2Q13319 367 aa9.57□□□□□ -0.88
NEDD4-203ENST00000502612 FAM20CQ8IXL6 584 aa9.57□□□□□ -0.88
NEDD4-203ENST00000502612 PHACTR4Q8IZ21 702 aa9.57□□□□□ -0.88
NEDD4-203ENST00000502612 C19orf47Q8N9M1 422 aaKnown RBP9.57□□□□□ -0.88
NEDD4-203ENST00000502612 KCT2Q8NC54 265 aa9.57□□□□□ -0.88
NEDD4-203ENST00000502612 EZH1Q92800 747 aaPredicted RBP9.57□□□□□ -0.88
NEDD4-203ENST00000502612 FOXQ1Q9C009 403 aa9.57□□□□□ -0.88
NEDD4-203ENST00000502612 PCDHB10Q9UN67 800 aa9.57□□□□□ -0.88
NEDD4-203ENST00000502612 RNF225M0QZC1 329 aaPredicted RBP9.56□□□□□ -0.88
NEDD4-203ENST00000502612 UBOX5O94941 541 aa9.56□□□□□ -0.88
NEDD4-203ENST00000502612 CAP2P40123 477 aa9.56□□□□□ -0.88
NEDD4-203ENST00000502612 UVSSAQ2YD98 709 aa9.56□□□□□ -0.88
NEDD4-203ENST00000502612 TAB3Q8N5C8 712 aaPredicted RBP9.56□□□□□ -0.88
NEDD4-203ENST00000502612 KCNF1Q9H3M0 494 aa9.56□□□□□ -0.88
NEDD4-203ENST00000502612 CCDC85CA6NKD9 419 aa9.55□□□□□ -0.88
NEDD4-203ENST00000502612 ITGB2P05107 769 aa9.55□□□□□ -0.88
NEDD4-203ENST00000502612 SOGA3Q5TF21 947 aa9.55□□□□□ -0.88
NEDD4-203ENST00000502612 NBPF6Q5VWK0 638 aa9.55□□□□□ -0.88
NEDD4-203ENST00000502612 SEZ6L2Q6UXD5 910 aa9.55□□□□□ -0.88
NEDD4-203ENST00000502612 TMEM192Q8IY95 271 aa9.55□□□□□ -0.88
NEDD4-203ENST00000502612 NBPF4Q96M43 638 aa9.55□□□□□ -0.88
NEDD4-203ENST00000502612 K7ELQ4 463 aaPredicted RBP9.54□□□□□ -0.88
NEDD4-203ENST00000502612 LRIG2O94898 1065 aa9.54□□□□□ -0.88
NEDD4-203ENST00000502612 NFKBIBQ15653 356 aa9.54□□□□□ -0.88
NEDD4-203ENST00000502612 DDR2Q16832 855 aa9.54□□□□□ -0.88
NEDD4-203ENST00000502612 C6orf15Q6UXA7 325 aaPredicted RBP9.54□□□□□ -0.88
NEDD4-203ENST00000502612 RIN3Q8TB24 985 aa9.54□□□□□ -0.88
NEDD4-203ENST00000502612 PPP1R13LQ8WUF5 828 aa9.54□□□□□ -0.88
NEDD4-203ENST00000502612 CYB5D2Q8WUJ1 264 aa9.54□□□□□ -0.88
NEDD4-203ENST00000502612 PSMG3-AS1Q96PY0 264 aa9.54□□□□□ -0.88
NEDD4-203ENST00000502612 MIPEPQ99797 713 aa9.54□□□□□ -0.88
NEDD4-203ENST00000502612 YIPF2Q9BWQ6 316 aa9.54□□□□□ -0.88
NEDD4-203ENST00000502612 C1GALT1Q9NS00 363 aa9.54□□□□□ -0.88
NEDD4-203ENST00000502612 FAM86C1Q9NVL1 165 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms