RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 ERO1AQ96HE7 468 aa9.51□□□□□ -0.89
DDX39B-218ENST00000478365 CCDC17Q96LX7 622 aa9.51□□□□□ -0.89
DDX39B-218ENST00000478365 PARK7Q99497 189 aaKnown RBP9.51□□□□□ -0.89
DDX39B-218ENST00000478365 WDR18Q9BV38 432 aa9.51□□□□□ -0.89
DDX39B-218ENST00000478365 ARMT1Q9H993 441 aa9.51□□□□□ -0.89
DDX39B-218ENST00000478365 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.51□□□□□ -0.89
DDX39B-218ENST00000478365 SAP30BPQ9UHR5 308 aaKnown RBP9.51□□□□□ -0.89
DDX39B-218ENST00000478365 PNMA3Q9UL41 463 aa9.51□□□□□ -0.89
DDX39B-218ENST00000478365 SLC4A4Q9Y6R1 1079 aa9.51□□□□□ -0.89
DDX39B-218ENST00000478365 ZHX2Q9Y6X8 837 aa9.51□□□□□ -0.89
DDX39B-218ENST00000478365 SIPA1L1O43166 1804 aa9.51□□□□□ -0.89
DDX39B-218ENST00000478365 PTPRFP10586 1907 aa9.5□□□□□ -0.89
DDX39B-218ENST00000478365 C19orf81C9J6K1 198 aa9.5□□□□□ -0.89
DDX39B-218ENST00000478365 GPR25O00155 361 aa9.5□□□□□ -0.89
DDX39B-218ENST00000478365 IGF2BP3O00425 579 aaKnown RBP eCLIP9.5□□□□□ -0.89
DDX39B-218ENST00000478365 IGHDP01880 384 aa9.5□□□□□ -0.89
DDX39B-218ENST00000478365 SLC3A2P08195 630 aaKnown RBP9.5□□□□□ -0.89
DDX39B-218ENST00000478365 SBK1Q52WX2 424 aa9.5□□□□□ -0.89
DDX39B-218ENST00000478365 ZMYM1Q5SVZ6 1142 aa9.5□□□□□ -0.89
DDX39B-218ENST00000478365 TSHZ3Q63HK5 1081 aa9.5□□□□□ -0.89
DDX39B-218ENST00000478365 TATDN1Q6P1N9 297 aa9.5□□□□□ -0.89
DDX39B-218ENST00000478365 ZNF280CQ8ND82 737 aa9.5□□□□□ -0.89
DDX39B-218ENST00000478365 GTF3C2Q8WUA4 911 aaPredicted RBP9.5□□□□□ -0.89
DDX39B-218ENST00000478365 STRBPQ96SI9 672 aaKnown RBP9.5□□□□□ -0.89
DDX39B-218ENST00000478365 SH2D4AQ9H788 454 aa9.5□□□□□ -0.89
DDX39B-218ENST00000478365 HELLSQ9NRZ9 838 aa9.5□□□□□ -0.89
DDX39B-218ENST00000478365 ZBTB21Q9ULJ3 1066 aa9.5□□□□□ -0.89
DDX39B-218ENST00000478365 AFG3L2Q9Y4W6 797 aa9.5□□□□□ -0.89
DDX39B-218ENST00000478365 PHIPQ8WWQ0 1821 aa9.49□□□□□ -0.89
DDX39B-218ENST00000478365 BAZ2AQ9UIF9 1905 aaKnown RBP9.49□□□□□ -0.89
DDX39B-218ENST00000478365 GPAA1O43292 621 aa9.49□□□□□ -0.89
DDX39B-218ENST00000478365 GNRH1P01148 92 aa9.49□□□□□ -0.89
DDX39B-218ENST00000478365 NT5C2P49902 561 aa9.49□□□□□ -0.89
DDX39B-218ENST00000478365 USP14P54578 494 aa9.49□□□□□ -0.89
DDX39B-218ENST00000478365 GABPAQ06546 454 aa9.49□□□□□ -0.89
DDX39B-218ENST00000478365 KIF22Q14807 665 aa9.49□□□□□ -0.89
DDX39B-218ENST00000478365 ABCB5Q2M3G0 1257 aa9.49□□□□□ -0.89
DDX39B-218ENST00000478365 CERKLQ49MI3 558 aaPredicted RBP9.49□□□□□ -0.89
DDX39B-218ENST00000478365 SH3D19Q5HYK7 790 aa9.49□□□□□ -0.89
DDX39B-218ENST00000478365 PPP4R3BQ5MIZ7 849 aa9.49□□□□□ -0.89
DDX39B-218ENST00000478365 B4GALNT3Q6L9W6 998 aa9.49□□□□□ -0.89
DDX39B-218ENST00000478365 POTEHQ6S545 545 aa9.49□□□□□ -0.89
DDX39B-218ENST00000478365 CTU1Q7Z7A3 348 aaKnown RBP9.49□□□□□ -0.89
DDX39B-218ENST00000478365 PLEKHM2Q8IWE5 1019 aa9.49□□□□□ -0.89
DDX39B-218ENST00000478365 OTUD7AQ8TE49 926 aaPredicted RBP9.49□□□□□ -0.89
DDX39B-218ENST00000478365 SDR42E1Q8WUS8 393 aa9.49□□□□□ -0.89
DDX39B-218ENST00000478365 OSBP2Q969R2 916 aa9.49□□□□□ -0.89
DDX39B-218ENST00000478365 PUS7LQ9H0K6 701 aaKnown RBP9.49□□□□□ -0.89
DDX39B-218ENST00000478365 TMOD4Q9NZQ9 345 aa9.49□□□□□ -0.89
DDX39B-218ENST00000478365 LOC285556D6RIA3 1793 aa9.48□□□□□ -0.89
DDX39B-218ENST00000478365 FAM196BA6NMK8 535 aa9.48□□□□□ -0.89
DDX39B-218ENST00000478365 TRIM6-TRIM34B2RNG4 842 aa9.48□□□□□ -0.89
DDX39B-218ENST00000478365 PATL2C9JE40 543 aaKnown RBP9.48□□□□□ -0.89
DDX39B-218ENST00000478365 BTBD19C9JJ37 291 aa9.48□□□□□ -0.89
DDX39B-218ENST00000478365 USP17L10C9JJH3 530 aa9.48□□□□□ -0.89
DDX39B-218ENST00000478365 TLR2O60603 784 aa9.48□□□□□ -0.89
DDX39B-218ENST00000478365 TBC1D8O95759 1140 aa9.48□□□□□ -0.89
DDX39B-218ENST00000478365 TDO2P48775 406 aa9.48□□□□□ -0.89
DDX39B-218ENST00000478365 CRHR2Q13324 411 aa9.48□□□□□ -0.89
DDX39B-218ENST00000478365 COL13A1Q5TAT6 717 aaPredicted RBP9.48□□□□□ -0.89
DDX39B-218ENST00000478365 C12orf60Q5U649 245 aa9.48□□□□□ -0.89
DDX39B-218ENST00000478365 TMEM179Q6ZVK1 233 aa9.48□□□□□ -0.89
DDX39B-218ENST00000478365 C16orf86Q6ZW13 317 aa9.48□□□□□ -0.89
DDX39B-218ENST00000478365 CENPQQ7L2Z9 268 aaPredicted RBP9.48□□□□□ -0.89
DDX39B-218ENST00000478365 ZNF296Q8WUU4 475 aaPredicted RBP9.48□□□□□ -0.89
DDX39B-218ENST00000478365 PTPN18Q99952 460 aa9.48□□□□□ -0.89
DDX39B-218ENST00000478365 DNAJC18Q9H819 358 aa9.48□□□□□ -0.89
DDX39B-218ENST00000478365 DIAPH3Q9NSV4 1193 aa9.48□□□□□ -0.89
DDX39B-218ENST00000478365 TSKSQ9UJT2 592 aa9.48□□□□□ -0.89
DDX39B-218ENST00000478365 AGTPBP1Q9UPW5 1226 aa9.48□□□□□ -0.89
DDX39B-218ENST00000478365 ZMYM6O95789 1325 aa9.48□□□□□ -0.89
DDX39B-218ENST00000478365 ROBO3Q96MS0 1386 aa9.48□□□□□ -0.89
DDX39B-218ENST00000478365 TRIM75PA6NK02 468 aa9.47□□□□□ -0.89
DDX39B-218ENST00000478365 USP17L12C9JPN9 530 aa9.47□□□□□ -0.89
DDX39B-218ENST00000478365 USP17L21D6R901 530 aa9.47□□□□□ -0.89
DDX39B-218ENST00000478365 PDHXO00330 501 aa9.47□□□□□ -0.89
DDX39B-218ENST00000478365 GH2P01242 217 aa9.47□□□□□ -0.89
DDX39B-218ENST00000478365 MYCNP04198 464 aaPredicted RBP9.47□□□□□ -0.89
DDX39B-218ENST00000478365 APPP05067 770 aa9.47□□□□□ -0.89
DDX39B-218ENST00000478365 OSBPP22059 807 aa9.47□□□□□ -0.89
DDX39B-218ENST00000478365 SHMT1P34896 483 aa9.47□□□□□ -0.89
DDX39B-218ENST00000478365 GCLCP48506 637 aaPredicted RBP9.47□□□□□ -0.89
DDX39B-218ENST00000478365 PLCD1P51178 756 aa9.47□□□□□ -0.89
DDX39B-218ENST00000478365 PRMT2P55345 433 aa9.47□□□□□ -0.89
DDX39B-218ENST00000478365 BACE1P56817 501 aa9.47□□□□□ -0.89
DDX39B-218ENST00000478365 SP3Q02447 781 aa9.47□□□□□ -0.89
DDX39B-218ENST00000478365 PDE4BQ07343 736 aa9.47□□□□□ -0.89
DDX39B-218ENST00000478365 SPP2Q13103 211 aa9.47□□□□□ -0.89
DDX39B-218ENST00000478365 MCMDC2Q4G0Z9 681 aa9.47□□□□□ -0.89
DDX39B-218ENST00000478365 USP17L2Q6R6M4 530 aa9.47□□□□□ -0.89
DDX39B-218ENST00000478365 GADL1Q6ZQY3 521 aa9.47□□□□□ -0.89
DDX39B-218ENST00000478365 FAM43AQ8N2R8 423 aa9.47□□□□□ -0.89
DDX39B-218ENST00000478365 FEZ1Q99689 392 aa9.47□□□□□ -0.89
DDX39B-218ENST00000478365 KIAA1683Q9H0B3 1180 aa9.47□□□□□ -0.89
DDX39B-218ENST00000478365 NAPBQ9H115 298 aa9.47□□□□□ -0.89
DDX39B-218ENST00000478365 RBM19Q9Y4C8 960 aaKnown RBP9.47□□□□□ -0.89
DDX39B-218ENST00000478365 GSG1L2A8MUP6 293 aa9.46□□□□□ -0.9
DDX39B-218ENST00000478365 PRKAB2O43741 272 aa9.46□□□□□ -0.9
DDX39B-218ENST00000478365 GDF11O95390 407 aa9.46□□□□□ -0.9
DDX39B-218ENST00000478365 PCP11498 1178 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms