RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 TRIB2Q92519 343 aa18.76■□□□□ 0.59
SF3A2-204ENST00000589118 ASCC2Q9H1I8 757 aaPredicted RBP18.76■□□□□ 0.59
SF3A2-204ENST00000589118 HMX1Q9NP08 348 aaPredicted RBP18.76■□□□□ 0.59
SF3A2-204ENST00000589118 MROH7-TTC4A0A0A0MT08 1334 aa18.75■□□□□ 0.59
SF3A2-204ENST00000589118 RPTORQ8N122 1335 aa18.75■□□□□ 0.59
SF3A2-204ENST00000589118 SEMA3EO15041 775 aa18.75■□□□□ 0.59
SF3A2-204ENST00000589118 ANP32CO43423 234 aa18.75■□□□□ 0.59
SF3A2-204ENST00000589118 UBTFL1P0CB47 393 aaPredicted RBP18.75■□□□□ 0.59
SF3A2-204ENST00000589118 JAG1P78504 1218 aa18.75■□□□□ 0.59
SF3A2-204ENST00000589118 SHROOM1Q2M3G4 852 aaPredicted RBP18.75■□□□□ 0.59
SF3A2-204ENST00000589118 NBPF3Q9H094 633 aa18.75■□□□□ 0.59
SF3A2-204ENST00000589118 C11orf49Q9H6J7 331 aa18.75■□□□□ 0.59
SF3A2-204ENST00000589118 GPR75-ASB3A0A0A6YYF3 556 aa18.74■□□□□ 0.59
SF3A2-204ENST00000589118 IL15P40933 162 aaPredicted RBP18.74■□□□□ 0.59
SF3A2-204ENST00000589118 ZNF280CQ8ND82 737 aa18.74■□□□□ 0.59
SF3A2-204ENST00000589118 FAM163AQ96GL9 167 aaPredicted RBP18.74■□□□□ 0.59
SF3A2-204ENST00000589118 SIPA1L1O43166 1804 aa18.74■□□□□ 0.59
SF3A2-204ENST00000589118 PFASO15067 1338 aa18.74■□□□□ 0.59
SF3A2-204ENST00000589118 TFCP2Q12800 502 aa18.73■□□□□ 0.59
SF3A2-204ENST00000589118 PROCA1Q8NCQ7 364 aaPredicted RBP18.73■□□□□ 0.59
SF3A2-204ENST00000589118 CDCA7LQ96GN5 454 aa18.73■□□□□ 0.59
SF3A2-204ENST00000589118 XAGE2Q96GT9 111 aa18.73■□□□□ 0.59
SF3A2-204ENST00000589118 P2RX7Q99572 595 aaKnown RBP18.73■□□□□ 0.59
SF3A2-204ENST00000589118 MTMR10Q9NXD2 777 aa18.73■□□□□ 0.59
SF3A2-204ENST00000589118 PNMA3Q9UL41 463 aa18.73■□□□□ 0.59
SF3A2-204ENST00000589118 CUL9Q8IWT3 2517 aa18.73■□□□□ 0.59
SF3A2-204ENST00000589118 A0A0C4DFX4 3053 aa18.72■□□□□ 0.59
SF3A2-204ENST00000589118 A0A1B0GUL7 405 aa18.72■□□□□ 0.59
SF3A2-204ENST00000589118 TBC1D12O60347 775 aa18.72■□□□□ 0.59
SF3A2-204ENST00000589118 CAP2P40123 477 aa18.72■□□□□ 0.59
SF3A2-204ENST00000589118 ERICH6Q7L0X2 663 aa18.72■□□□□ 0.59
SF3A2-204ENST00000589118 ZGPATQ8N5A5 531 aaKnown RBP18.72■□□□□ 0.59
SF3A2-204ENST00000589118 ANKLE1Q8NAG6 615 aa18.72■□□□□ 0.59
SF3A2-204ENST00000589118 UBE2OQ9C0C9 1292 aaKnown RBP18.72■□□□□ 0.59
SF3A2-204ENST00000589118 TXNRD2Q9NNW7 524 aa18.72■□□□□ 0.59
SF3A2-204ENST00000589118 PRKAR2AP13861 404 aaKnown RBP18.71■□□□□ 0.59
SF3A2-204ENST00000589118 GCLCP48506 637 aaPredicted RBP18.71■□□□□ 0.59
SF3A2-204ENST00000589118 MDM2Q00987 491 aaPredicted RBP18.71■□□□□ 0.59
SF3A2-204ENST00000589118 CCL14Q16627 93 aa18.71■□□□□ 0.59
SF3A2-204ENST00000589118 TDHQ8IZJ6 230 aa18.71■□□□□ 0.59
SF3A2-204ENST00000589118 NEUROD6Q96NK8 337 aa18.71■□□□□ 0.59
SF3A2-204ENST00000589118 MEIS3Q99687 375 aa18.71■□□□□ 0.59
SF3A2-204ENST00000589118 OSBPL5Q9H0X9 879 aaPredicted RBP18.71■□□□□ 0.59
SF3A2-204ENST00000589118 SMC4Q9NTJ3 1288 aa18.71■□□□□ 0.59
SF3A2-204ENST00000589118 HMG20BQ9P0W2 317 aa18.71■□□□□ 0.59
SF3A2-204ENST00000589118 FBXO3Q9UK99 471 aa18.71■□□□□ 0.59
SF3A2-204ENST00000589118 OGDHLQ9ULD0 1010 aa18.71■□□□□ 0.59
SF3A2-204ENST00000589118 USP17L5A8MUK1 530 aa18.7■□□□□ 0.58
SF3A2-204ENST00000589118 CCND3P30281 292 aaPredicted RBP18.7■□□□□ 0.58
SF3A2-204ENST00000589118 MTMR2Q13614 643 aa18.7■□□□□ 0.58
SF3A2-204ENST00000589118 Q3C1V9 767 aa18.7■□□□□ 0.58
SF3A2-204ENST00000589118 SPTY2D1Q68D10 685 aaPredicted RBP18.7■□□□□ 0.58
SF3A2-204ENST00000589118 SLF2Q8IX21 1173 aa18.7■□□□□ 0.58
SF3A2-204ENST00000589118 SH3RF3Q8TEJ3 882 aaPredicted RBP18.7■□□□□ 0.58
SF3A2-204ENST00000589118 COPRSQ9NQ92 184 aa18.7■□□□□ 0.58
SF3A2-204ENST00000589118 NOB1Q9ULX3 412 aaKnown RBP18.7■□□□□ 0.58
SF3A2-204ENST00000589118 CACNB2Q08289 660 aaPredicted RBP18.69■□□□□ 0.58
SF3A2-204ENST00000589118 LRRC26Q2I0M4 334 aa18.69■□□□□ 0.58
SF3A2-204ENST00000589118 LRIT3Q3SXY7 679 aa18.69■□□□□ 0.58
SF3A2-204ENST00000589118 POTEEQ6S8J3 1075 aa18.69■□□□□ 0.58
SF3A2-204ENST00000589118 NSUN4Q96CB9 384 aaKnown RBP18.69■□□□□ 0.58
SF3A2-204ENST00000589118 FAM161BQ96MY7 647 aa18.69■□□□□ 0.58
SF3A2-204ENST00000589118 RAI14Q9P0K7 980 aa18.69■□□□□ 0.58
SF3A2-204ENST00000589118 MORF4L1Q9UBU8 362 aa18.69■□□□□ 0.58
SF3A2-204ENST00000589118 STXBP5LQ9Y2K9 1186 aa18.69■□□□□ 0.58
SF3A2-204ENST00000589118 CDK5RAP2Q96SN8 1893 aa18.69■□□□□ 0.58
SF3A2-204ENST00000589118 ZNF316A6NFI3 1004 aaPredicted RBP18.68■□□□□ 0.58
SF3A2-204ENST00000589118 SLFN5Q08AF3 891 aa18.68■□□□□ 0.58
SF3A2-204ENST00000589118 SH3D19Q5HYK7 790 aa18.68■□□□□ 0.58
SF3A2-204ENST00000589118 MAP3K21Q5TCX8 1036 aa18.68■□□□□ 0.58
SF3A2-204ENST00000589118 COL25A1Q9BXS0 654 aaPredicted RBP18.68■□□□□ 0.58
SF3A2-204ENST00000589118 PORCNQ9H237 461 aa18.68■□□□□ 0.58
SF3A2-204ENST00000589118 RBPJLQ9UBG7 517 aa18.68■□□□□ 0.58
SF3A2-204ENST00000589118 NDUFB9Q9Y6M9 179 aa18.68■□□□□ 0.58
SF3A2-204ENST00000589118 MYO5AQ9Y4I1 1855 aaKnown RBP18.68■□□□□ 0.58
SF3A2-204ENST00000589118 CAPN2P17655 700 aa18.67■□□□□ 0.58
SF3A2-204ENST00000589118 TEX11Q8IYF3 940 aa18.67■□□□□ 0.58
SF3A2-204ENST00000589118 FRMPD3Q5JV73 1810 aa18.66■□□□□ 0.58
SF3A2-204ENST00000589118 GDF11O95390 407 aa18.66■□□□□ 0.58
SF3A2-204ENST00000589118 COL6A1P12109 1028 aa18.66■□□□□ 0.58
SF3A2-204ENST00000589118 IRX3P78415 501 aaPredicted RBP18.66■□□□□ 0.58
SF3A2-204ENST00000589118 PABPC4Q13310 644 aaKnown RBP eCLIP18.66■□□□□ 0.58
SF3A2-204ENST00000589118 LHX8Q68G74 356 aa18.66■□□□□ 0.58
SF3A2-204ENST00000589118 GPR153Q6NV75 609 aa18.66■□□□□ 0.58
SF3A2-204ENST00000589118 SPATA5Q8NB90 893 aa18.66■□□□□ 0.58
SF3A2-204ENST00000589118 NUDT12Q9BQG2 462 aa18.66■□□□□ 0.58
SF3A2-204ENST00000589118 PAGR1Q9BTK6 254 aa18.66■□□□□ 0.58
SF3A2-204ENST00000589118 DNAJC18Q9H819 358 aa18.66■□□□□ 0.58
SF3A2-204ENST00000589118 SNRKQ9NRH2 765 aa18.66■□□□□ 0.58
SF3A2-204ENST00000589118 PDS5AQ29RF7 1337 aaKnown RBP18.66■□□□□ 0.58
SF3A2-204ENST00000589118 E9PSI1 815 aa18.65■□□□□ 0.58
SF3A2-204ENST00000589118 BACE1P56817 501 aa18.65■□□□□ 0.58
SF3A2-204ENST00000589118 HERVK_113P62684 666 aa18.65■□□□□ 0.58
SF3A2-204ENST00000589118 MAPKAPK5Q8IW41 473 aa18.65■□□□□ 0.58
SF3A2-204ENST00000589118 GPRC5AQ8NFJ5 357 aa18.65■□□□□ 0.58
SF3A2-204ENST00000589118 SRGAP3O43295 1099 aa18.64■□□□□ 0.57
SF3A2-204ENST00000589118 NPM3O75607 178 aaKnown RBP18.64■□□□□ 0.57
SF3A2-204ENST00000589118 LDHCP07864 332 aa18.64■□□□□ 0.57
SF3A2-204ENST00000589118 MCAMP43121 646 aa18.64■□□□□ 0.57
SF3A2-204ENST00000589118 MVPQ14764 893 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms