RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 STRBPQ96SI9 672 aaKnown RBP11.78□□□□□ -0.52
PSEN1-213ENST00000555386 CREBZFQ9NS37 354 aa11.78□□□□□ -0.52
PSEN1-213ENST00000555386 CYP2D7A0A087X1C5 515 aa11.77□□□□□ -0.52
PSEN1-213ENST00000555386 CYP2D6P10635 497 aa11.77□□□□□ -0.52
PSEN1-213ENST00000555386 EVX2Q03828 476 aa11.77□□□□□ -0.52
PSEN1-213ENST00000555386 MKRN3Q13064 507 aaKnown RBP11.77□□□□□ -0.52
PSEN1-213ENST00000555386 TMED8Q6PL24 325 aaPredicted RBP11.77□□□□□ -0.52
PSEN1-213ENST00000555386 CERS3Q8IU89 383 aa11.77□□□□□ -0.52
PSEN1-213ENST00000555386 CRACR2BQ8N4Y2 399 aaPredicted RBP11.77□□□□□ -0.52
PSEN1-213ENST00000555386 TRIM34Q9BYJ4 488 aa11.77□□□□□ -0.52
PSEN1-213ENST00000555386 PAPPA2Q9BXP8 1791 aa11.77□□□□□ -0.52
PSEN1-213ENST00000555386 MYH8P13535 1937 aa11.77□□□□□ -0.53
PSEN1-213ENST00000555386 USP2O75604 605 aaPredicted RBP11.76□□□□□ -0.53
PSEN1-213ENST00000555386 TDO2P48775 406 aa11.76□□□□□ -0.53
PSEN1-213ENST00000555386 ZNF157P51786 506 aaPredicted RBP11.76□□□□□ -0.53
PSEN1-213ENST00000555386 DEFB115Q30KQ5 88 aa11.76□□□□□ -0.53
PSEN1-213ENST00000555386 MCMDC2Q4G0Z9 681 aa11.76□□□□□ -0.53
PSEN1-213ENST00000555386 DCAF15Q66K64 600 aa11.76□□□□□ -0.53
PSEN1-213ENST00000555386 CYP4F22Q6NT55 531 aa11.76□□□□□ -0.53
PSEN1-213ENST00000555386 SAPCD2Q86UD0 394 aa11.76□□□□□ -0.53
PSEN1-213ENST00000555386 SNX21Q969T3 373 aa11.76□□□□□ -0.53
PSEN1-213ENST00000555386 CLMNQ96JQ2 1002 aa11.76□□□□□ -0.53
PSEN1-213ENST00000555386 WRNIP1Q96S55 665 aa11.76□□□□□ -0.53
PSEN1-213ENST00000555386 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.76□□□□□ -0.53
PSEN1-213ENST00000555386 DCP1AQ9NPI6 582 aaPredicted RBP11.76□□□□□ -0.53
PSEN1-213ENST00000555386 TLL2Q9Y6L7 1015 aa11.76□□□□□ -0.53
PSEN1-213ENST00000555386 OTOFQ9HC10 1997 aa11.76□□□□□ -0.53
PSEN1-213ENST00000555386 MINDY4BA8MYZ0 360 aa11.76□□□□□ -0.53
PSEN1-213ENST00000555386 ABCB7O75027 752 aa11.76□□□□□ -0.53
PSEN1-213ENST00000555386 CDC45O75419 566 aa11.76□□□□□ -0.53
PSEN1-213ENST00000555386 HLA-DOAP06340 250 aa11.76□□□□□ -0.53
PSEN1-213ENST00000555386 IREB2P48200 963 aaKnown RBP11.76□□□□□ -0.53
PSEN1-213ENST00000555386 VPS53Q5VIR6 699 aa11.76□□□□□ -0.53
PSEN1-213ENST00000555386 ZNF589Q86UQ0 364 aaPredicted RBP11.76□□□□□ -0.53
PSEN1-213ENST00000555386 ZKSCAN4Q969J2 545 aaPredicted RBP11.76□□□□□ -0.53
PSEN1-213ENST00000555386 HOOK2Q96ED9 719 aa11.76□□□□□ -0.53
PSEN1-213ENST00000555386 ZNF341Q9BYN7 854 aa11.76□□□□□ -0.53
PSEN1-213ENST00000555386 ELP3Q9H9T3 547 aa11.76□□□□□ -0.53
PSEN1-213ENST00000555386 HELLSQ9NRZ9 838 aa11.76□□□□□ -0.53
PSEN1-213ENST00000555386 SIPA1L1O43166 1804 aa11.75□□□□□ -0.53
PSEN1-213ENST00000555386 GSG1L2A8MUP6 293 aa11.75□□□□□ -0.53
PSEN1-213ENST00000555386 USP17L12C9JPN9 530 aa11.75□□□□□ -0.53
PSEN1-213ENST00000555386 USP17L21D6R901 530 aa11.75□□□□□ -0.53
PSEN1-213ENST00000555386 SMIM22K7EJ46 135 aa11.75□□□□□ -0.53
PSEN1-213ENST00000555386 HIP1O00291 1037 aa11.75□□□□□ -0.53
PSEN1-213ENST00000555386 INPP5BP32019 993 aa11.75□□□□□ -0.53
PSEN1-213ENST00000555386 PLCD1P51178 756 aa11.75□□□□□ -0.53
PSEN1-213ENST00000555386 HSCBQ8IWL3 235 aa11.75□□□□□ -0.53
PSEN1-213ENST00000555386 AMOTL1Q8IY63 956 aa11.75□□□□□ -0.53
PSEN1-213ENST00000555386 ATP8A2Q9NTI2 1148 aa11.75□□□□□ -0.53
PSEN1-213ENST00000555386 PI4KBQ9UBF8 816 aa11.75□□□□□ -0.53
PSEN1-213ENST00000555386 RPAP1Q9BWH6 1393 aaPredicted RBP11.74□□□□□ -0.53
PSEN1-213ENST00000555386 GNAT2P19087 354 aa11.74□□□□□ -0.53
PSEN1-213ENST00000555386 CHMLP26374 656 aa11.74□□□□□ -0.53
PSEN1-213ENST00000555386 FKBP1BP68106 108 aa11.74□□□□□ -0.53
PSEN1-213ENST00000555386 MAP3K9P80192 1104 aa11.74□□□□□ -0.53
PSEN1-213ENST00000555386 GSE1Q14687 1217 aa11.74□□□□□ -0.53
PSEN1-213ENST00000555386 RGMBQ6NW40 437 aa11.74□□□□□ -0.53
PSEN1-213ENST00000555386 TTC6Q86TZ1 520 aa11.74□□□□□ -0.53
PSEN1-213ENST00000555386 BBXQ8WY36 941 aaPredicted RBP11.74□□□□□ -0.53
PSEN1-213ENST00000555386 SLC10A4Q96EP9 437 aa11.74□□□□□ -0.53
PSEN1-213ENST00000555386 DYNLL2Q96FJ2 89 aa11.74□□□□□ -0.53
PSEN1-213ENST00000555386 NAPBQ9H115 298 aa11.74□□□□□ -0.53
PSEN1-213ENST00000555386 DHX36Q9H2U1 1008 aaKnown RBP11.74□□□□□ -0.53
PSEN1-213ENST00000555386 EPB41L4AQ9HCS5 686 aaPredicted RBP11.74□□□□□ -0.53
PSEN1-213ENST00000555386 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.74□□□□□ -0.53
PSEN1-213ENST00000555386 CSADQ9Y600 493 aa11.74□□□□□ -0.53
PSEN1-213ENST00000555386 CCDC171Q6TFL3 1326 aa11.74□□□□□ -0.53
PSEN1-213ENST00000555386 ATAD5Q96QE3 1844 aa11.73□□□□□ -0.53
PSEN1-213ENST00000555386 PATL2C9JE40 543 aaKnown RBP11.73□□□□□ -0.53
PSEN1-213ENST00000555386 AOC2O75106 756 aa11.73□□□□□ -0.53
PSEN1-213ENST00000555386 VEGFBP49765 207 aa11.73□□□□□ -0.53
PSEN1-213ENST00000555386 VGLL4Q14135 290 aa11.73□□□□□ -0.53
PSEN1-213ENST00000555386 CTR9Q6PD62 1173 aa11.73□□□□□ -0.53
PSEN1-213ENST00000555386 IFNL3Q8IZI9 196 aa11.73□□□□□ -0.53
PSEN1-213ENST00000555386 SLC44A5Q8NCS7 719 aa11.73□□□□□ -0.53
PSEN1-213ENST00000555386 KLRG1Q96E93 195 aa11.73□□□□□ -0.53
PSEN1-213ENST00000555386 CAPNS2Q96L46 248 aa11.73□□□□□ -0.53
PSEN1-213ENST00000555386 NACAP1Q9BZK3 213 aa11.73□□□□□ -0.53
PSEN1-213ENST00000555386 IL25Q9H293 177 aa11.73□□□□□ -0.53
PSEN1-213ENST00000555386 ATRNL1Q5VV63 1379 aa11.73□□□□□ -0.53
PSEN1-213ENST00000555386 DDX60LQ5H9U9 1706 aaKnown RBP11.72□□□□□ -0.53
PSEN1-213ENST00000555386 GDF11O95390 407 aa11.72□□□□□ -0.53
PSEN1-213ENST00000555386 SHROOM1Q2M3G4 852 aaPredicted RBP11.72□□□□□ -0.53
PSEN1-213ENST00000555386 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.72□□□□□ -0.53
PSEN1-213ENST00000555386 CCDC84Q86UT8 332 aaPredicted RBP11.72□□□□□ -0.53
PSEN1-213ENST00000555386 ANKRD13AQ8IZ07 590 aa11.72□□□□□ -0.53
PSEN1-213ENST00000555386 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.72□□□□□ -0.53
PSEN1-213ENST00000555386 SERPINB13Q9UIV8 391 aa11.72□□□□□ -0.53
PSEN1-213ENST00000555386 LAMB1P07942 1786 aa11.72□□□□□ -0.53
PSEN1-213ENST00000555386 RASSF10A6NK89 507 aa11.71□□□□□ -0.53
PSEN1-213ENST00000555386 MPHOSPH10O00566 681 aaKnown RBP11.71□□□□□ -0.53
PSEN1-213ENST00000555386 ECM2O94769 699 aaPredicted RBP11.71□□□□□ -0.53
PSEN1-213ENST00000555386 HSPD1P10809 573 aaKnown RBP11.71□□□□□ -0.53
PSEN1-213ENST00000555386 HAND2P61296 217 aa11.71□□□□□ -0.53
PSEN1-213ENST00000555386 RRP1BQ14684 758 aaKnown RBP11.71□□□□□ -0.53
PSEN1-213ENST00000555386 LDLRAD1Q5T700 205 aa11.71□□□□□ -0.53
PSEN1-213ENST00000555386 CASC1Q6TDU7 716 aa11.71□□□□□ -0.53
PSEN1-213ENST00000555386 FOXP4Q8IVH2 680 aaPredicted RBP11.71□□□□□ -0.53
PSEN1-213ENST00000555386 RUFY2Q8WXA3 655 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms