RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 ANKRD13CQ8N6S4 541 aa29.48■■■□□ 2.31
LEMD3-203ENST00000541171 SLAIN1Q8ND83 568 aa29.48■■■□□ 2.31
LEMD3-203ENST00000541171 DBNDD2Q9BQY9 259 aa29.48■■■□□ 2.31
LEMD3-203ENST00000541171 C1orf115Q9H7X2 142 aa29.48■■■□□ 2.31
LEMD3-203ENST00000541171 FPGT-TNNI3KV9GXZ4 949 aa29.48■■■□□ 2.31
LEMD3-203ENST00000541171 H0YGN5 161 aa29.47■■■□□ 2.31
LEMD3-203ENST00000541171 ADCY3O60266 1144 aa29.47■■■□□ 2.31
LEMD3-203ENST00000541171 GJB1P08034 283 aa29.47■■■□□ 2.31
LEMD3-203ENST00000541171 GJA8P48165 433 aa29.47■■■□□ 2.31
LEMD3-203ENST00000541171 POLA2Q14181 598 aa29.47■■■□□ 2.31
LEMD3-203ENST00000541171 CCDC158Q5M9N0 1113 aa29.47■■■□□ 2.31
LEMD3-203ENST00000541171 NAA16Q6N069 864 aaPredicted RBP29.47■■■□□ 2.31
LEMD3-203ENST00000541171 DPF3Q92784 378 aa29.47■■■□□ 2.31
LEMD3-203ENST00000541171 AATFQ9NY61 560 aaKnown RBP eCLIP29.47■■■□□ 2.31
LEMD3-203ENST00000541171 COLQQ9Y215 455 aaPredicted RBP29.47■■■□□ 2.31
LEMD3-203ENST00000541171 PHIPQ8WWQ0 1821 aa29.47■■■□□ 2.31
LEMD3-203ENST00000541171 SURF6O75683 361 aaKnown RBP29.46■■■□□ 2.31
LEMD3-203ENST00000541171 CAP2P40123 477 aa29.46■■■□□ 2.31
LEMD3-203ENST00000541171 ATP8B2P98198 1209 aa29.46■■■□□ 2.31
LEMD3-203ENST00000541171 RRP1BQ14684 758 aaKnown RBP29.46■■■□□ 2.31
LEMD3-203ENST00000541171 ZNF280CQ8ND82 737 aa29.46■■■□□ 2.31
LEMD3-203ENST00000541171 UNC93B1Q9H1C4 597 aa29.46■■■□□ 2.31
LEMD3-203ENST00000541171 PNMA3Q9UL41 463 aa29.46■■■□□ 2.31
LEMD3-203ENST00000541171 TAOK2Q9UL54 1235 aa29.46■■■□□ 2.31
LEMD3-203ENST00000541171 MGAMO43451 1857 aa29.45■■■□□ 2.31
LEMD3-203ENST00000541171 BAG3O95817 575 aa29.45■■■□□ 2.31
LEMD3-203ENST00000541171 ELNP15502 786 aa29.45■■■□□ 2.31
LEMD3-203ENST00000541171 GPR108Q9NPR9 543 aa29.45■■■□□ 2.31
LEMD3-203ENST00000541171 PTPRFP10586 1907 aa29.45■■■□□ 2.3
LEMD3-203ENST00000541171 HMGCS2P54868 508 aa29.44■■■□□ 2.3
LEMD3-203ENST00000541171 PROCA1Q8NCQ7 364 aaPredicted RBP29.44■■■□□ 2.3
LEMD3-203ENST00000541171 SSH3Q8TE77 659 aa29.44■■■□□ 2.3
LEMD3-203ENST00000541171 COL2A1P02458 1487 aaPredicted RBP29.43■■■□□ 2.3
LEMD3-203ENST00000541171 USP17L5A8MUK1 530 aa29.43■■■□□ 2.3
LEMD3-203ENST00000541171 MAPKAPK5Q8IW41 473 aa29.43■■■□□ 2.3
LEMD3-203ENST00000541171 TGFBRAP1Q8WUH2 860 aa29.43■■■□□ 2.3
LEMD3-203ENST00000541171 PI4KBQ9UBF8 816 aa29.43■■■□□ 2.3
LEMD3-203ENST00000541171 HERC5Q9UII4 1024 aaKnown RBP29.43■■■□□ 2.3
LEMD3-203ENST00000541171 CYP2E1P05181 493 aaPredicted RBP29.42■■■□□ 2.3
LEMD3-203ENST00000541171 FTSJ3Q8IY81 847 aaKnown RBP29.42■■■□□ 2.3
LEMD3-203ENST00000541171 U2AF1L4Q8WU68 220 aaKnown RBP29.42■■■□□ 2.3
LEMD3-203ENST00000541171 COA7Q96BR5 231 aa29.42■■■□□ 2.3
LEMD3-203ENST00000541171 INHAP05111 366 aa29.41■■■□□ 2.3
LEMD3-203ENST00000541171 ADGRA1Q86SQ6 560 aa29.41■■■□□ 2.3
LEMD3-203ENST00000541171 TBC1D2Q9BYX2 928 aa29.41■■■□□ 2.3
LEMD3-203ENST00000541171 DHX36Q9H2U1 1008 aaKnown RBP29.41■■■□□ 2.3
LEMD3-203ENST00000541171 CEP290O15078 2479 aa29.4■■■□□ 2.3
LEMD3-203ENST00000541171 PLCG2P16885 1265 aa29.4■■■□□ 2.3
LEMD3-203ENST00000541171 ZAP70P43403 619 aa29.4■■■□□ 2.3
LEMD3-203ENST00000541171 HNRNPUQ00839 825 aaKnown RBP eCLIP29.4■■■□□ 2.3
LEMD3-203ENST00000541171 ITPRIPQ8IWB1 547 aa29.4■■■□□ 2.3
LEMD3-203ENST00000541171 AS3MTQ9HBK9 375 aa29.4■■■□□ 2.3
LEMD3-203ENST00000541171 FXR1P51114 621 aaKnown RBP eCLIP29.39■■■□□ 2.3
LEMD3-203ENST00000541171 PPP4CP60510 307 aa29.39■■■□□ 2.3
LEMD3-203ENST00000541171 PABPC4Q13310 644 aaKnown RBP eCLIP29.39■■■□□ 2.3
LEMD3-203ENST00000541171 IRF5Q13568 498 aa29.39■■■□□ 2.3
LEMD3-203ENST00000541171 FAM110CQ1W6H9 321 aa29.39■■■□□ 2.3
LEMD3-203ENST00000541171 PXYLP1Q8TE99 480 aa29.39■■■□□ 2.3
LEMD3-203ENST00000541171 CCDC8Q9H0W5 538 aaPredicted RBP29.39■■■□□ 2.3
LEMD3-203ENST00000541171 SGPL1O95470 568 aa29.38■■■□□ 2.29
LEMD3-203ENST00000541171 CRACR2BQ8N4Y2 399 aaPredicted RBP29.38■■■□□ 2.29
LEMD3-203ENST00000541171 HTATIP2Q9BUP3 242 aa29.38■■■□□ 2.29
LEMD3-203ENST00000541171 TRIM34Q9BYJ4 488 aa29.38■■■□□ 2.29
LEMD3-203ENST00000541171 ASCC2Q9H1I8 757 aaPredicted RBP29.38■■■□□ 2.29
LEMD3-203ENST00000541171 PIH1D3Q9NQM4 214 aaKnown RBP29.38■■■□□ 2.29
LEMD3-203ENST00000541171 FARP2O94887 1054 aaPredicted RBP29.37■■■□□ 2.29
LEMD3-203ENST00000541171 GCLCP48506 637 aaPredicted RBP29.37■■■□□ 2.29
LEMD3-203ENST00000541171 UBE2Q1Q7Z7E8 422 aa29.37■■■□□ 2.29
LEMD3-203ENST00000541171 TLR7Q9NYK1 1049 aaKnown RBP29.37■■■□□ 2.29
LEMD3-203ENST00000541171 SAP30BPQ9UHR5 308 aaKnown RBP29.37■■■□□ 2.29
LEMD3-203ENST00000541171 DBNLQ9UJU6 430 aaKnown RBP29.37■■■□□ 2.29
LEMD3-203ENST00000541171 PALD1Q9ULE6 856 aa29.37■■■□□ 2.29
LEMD3-203ENST00000541171 FLT1P17948 1338 aa29.37■■■□□ 2.29
LEMD3-203ENST00000541171 TFRCP02786 760 aaKnown RBP29.36■■■□□ 2.29
LEMD3-203ENST00000541171 RLBP1P12271 317 aa29.36■■■□□ 2.29
LEMD3-203ENST00000541171 JAG1P78504 1218 aa29.36■■■□□ 2.29
LEMD3-203ENST00000541171 SH3D19Q5HYK7 790 aa29.36■■■□□ 2.29
LEMD3-203ENST00000541171 CHRDL2Q6WN34 429 aa29.36■■■□□ 2.29
LEMD3-203ENST00000541171 DEFB118Q96PH6 123 aa29.36■■■□□ 2.29
LEMD3-203ENST00000541171 ATAD5Q96QE3 1844 aa29.36■■■□□ 2.29
LEMD3-203ENST00000541171 ZBTB7BO15156 539 aaPredicted RBP29.35■■■□□ 2.29
LEMD3-203ENST00000541171 GDF11O95390 407 aa29.35■■■□□ 2.29
LEMD3-203ENST00000541171 DYNLL1P63167 89 aaKnown RBP29.35■■■□□ 2.29
LEMD3-203ENST00000541171 MTMR2Q13614 643 aa29.35■■■□□ 2.29
LEMD3-203ENST00000541171 FOXP4Q8IVH2 680 aaPredicted RBP29.35■■■□□ 2.29
LEMD3-203ENST00000541171 ZNF512BQ96KM6 892 aaPredicted RBP29.35■■■□□ 2.29
LEMD3-203ENST00000541171 DNAJC18Q9H819 358 aa29.35■■■□□ 2.29
LEMD3-203ENST00000541171 TMOD4Q9NZQ9 345 aa29.35■■■□□ 2.29
LEMD3-203ENST00000541171 NOP58Q9Y2X3 529 aaKnown RBP29.35■■■□□ 2.29
LEMD3-203ENST00000541171 ASNSP08243 561 aa29.34■■■□□ 2.29
LEMD3-203ENST00000541171 CYP7A1P22680 504 aa29.34■■■□□ 2.29
LEMD3-203ENST00000541171 SHROOM1Q2M3G4 852 aaPredicted RBP29.34■■■□□ 2.29
LEMD3-203ENST00000541171 WDR18Q9BV38 432 aa29.34■■■□□ 2.29
LEMD3-203ENST00000541171 BACE1P56817 501 aa29.33■■■□□ 2.29
LEMD3-203ENST00000541171 IRX3P78415 501 aaPredicted RBP29.33■■■□□ 2.29
LEMD3-203ENST00000541171 EAF2Q96CJ1 260 aaPredicted RBP29.33■■■□□ 2.29
LEMD3-203ENST00000541171 DOCK3Q8IZD9 2030 aa29.32■■■□□ 2.28
LEMD3-203ENST00000541171 LOC285556D6RIA3 1793 aa29.32■■■□□ 2.28
LEMD3-203ENST00000541171 MAST2Q6P0Q8 1798 aa29.32■■■□□ 2.28
LEMD3-203ENST00000541171 IDH1O75874 414 aaKnown RBP29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms