RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 FAM204AQ9H8W3 233 aa11.81□□□□□ -0.52
NEK1-206ENST00000510533 SAP30BPQ9UHR5 308 aaKnown RBP11.81□□□□□ -0.52
NEK1-206ENST00000510533 PAK2Q13177 524 aa11.81□□□□□ -0.52
NEK1-206ENST00000510533 NEDD9Q14511 834 aa11.81□□□□□ -0.52
NEK1-206ENST00000510533 LIN9Q5TKA1 542 aa11.81□□□□□ -0.52
NEK1-206ENST00000510533 KBTBD3Q8NAB2 608 aa11.81□□□□□ -0.52
NEK1-206ENST00000510533 FAM89AQ96GI7 184 aa11.81□□□□□ -0.52
NEK1-206ENST00000510533 RTCBQ9Y3I0 505 aaKnown RBP11.81□□□□□ -0.52
NEK1-206ENST00000510533 MAP3K19Q56UN5 1328 aa11.81□□□□□ -0.52
NEK1-206ENST00000510533 ITSN2Q9NZM3 1697 aa11.81□□□□□ -0.52
NEK1-206ENST00000510533 SMTNP53814 917 aa11.81□□□□□ -0.52
NEK1-206ENST00000510533 SP4Q02446 784 aa11.81□□□□□ -0.52
NEK1-206ENST00000510533 MTX1Q13505 466 aa11.81□□□□□ -0.52
NEK1-206ENST00000510533 KRT40Q6A162 431 aa11.81□□□□□ -0.52
NEK1-206ENST00000510533 CACNA2D3Q8IZS8 1091 aa11.81□□□□□ -0.52
NEK1-206ENST00000510533 IP6K1Q92551 441 aa11.81□□□□□ -0.52
NEK1-206ENST00000510533 EYA3Q99504 573 aa11.81□□□□□ -0.52
NEK1-206ENST00000510533 ODF2LQ9ULJ1 636 aa11.81□□□□□ -0.52
NEK1-206ENST00000510533 PCDH11XQ9BZA7 1347 aa11.81□□□□□ -0.52
NEK1-206ENST00000510533 PCDH11YQ9BZA8 1340 aa11.81□□□□□ -0.52
NEK1-206ENST00000510533 RIMBP2O15034 1052 aa11.81□□□□□ -0.52
NEK1-206ENST00000510533 SNX16P57768 344 aa11.81□□□□□ -0.52
NEK1-206ENST00000510533 TSKSQ9UJT2 592 aa11.81□□□□□ -0.52
NEK1-206ENST00000510533 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.81□□□□□ -0.52
NEK1-206ENST00000510533 WDR7Q9Y4E6 1490 aa11.8□□□□□ -0.52
NEK1-206ENST00000510533 ZMYM4Q5VZL5 1548 aa11.8□□□□□ -0.52
NEK1-206ENST00000510533 CEP104O60308 925 aa11.8□□□□□ -0.52
NEK1-206ENST00000510533 PPP2R5BQ15173 497 aa11.8□□□□□ -0.52
NEK1-206ENST00000510533 LONRF3Q496Y0 759 aa11.8□□□□□ -0.52
NEK1-206ENST00000510533 CEP85LQ5SZL2 805 aa11.8□□□□□ -0.52
NEK1-206ENST00000510533 BEND3Q5T5X7 828 aa11.8□□□□□ -0.52
NEK1-206ENST00000510533 KLHDC4Q8TBB5 520 aa11.8□□□□□ -0.52
NEK1-206ENST00000510533 TRIM31Q9BZY9 425 aa11.8□□□□□ -0.52
NEK1-206ENST00000510533 PKD2L1Q9P0L9 805 aa11.8□□□□□ -0.52
NEK1-206ENST00000510533 GCP02774 474 aa11.8□□□□□ -0.52
NEK1-206ENST00000510533 ARHGAP25P42331 645 aa11.8□□□□□ -0.52
NEK1-206ENST00000510533 TAOK1Q7L7X3 1001 aa11.8□□□□□ -0.52
NEK1-206ENST00000510533 GLT8D2Q9H1C3 349 aa11.8□□□□□ -0.52
NEK1-206ENST00000510533 OAS2P29728 719 aaKnown RBP11.8□□□□□ -0.52
NEK1-206ENST00000510533 LMNTD2Q8IXW0 634 aa11.8□□□□□ -0.52
NEK1-206ENST00000510533 SH2D4AQ9H788 454 aa11.8□□□□□ -0.52
NEK1-206ENST00000510533 E7EVH7 732 aa11.8□□□□□ -0.52
NEK1-206ENST00000510533 CHMP2AO43633 222 aa11.8□□□□□ -0.52
NEK1-206ENST00000510533 PCK1P35558 622 aa11.8□□□□□ -0.52
NEK1-206ENST00000510533 PPFIA1Q13136 1202 aa11.8□□□□□ -0.52
NEK1-206ENST00000510533 CABLES1Q8TDN4 633 aa11.8□□□□□ -0.52
NEK1-206ENST00000510533 SLF1Q9BQI6 1058 aa11.8□□□□□ -0.52
NEK1-206ENST00000510533 BRD1O95696 1058 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 GAS8O95995 478 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 NONOQ15233 471 aaKnown RBP eCLIP11.79□□□□□ -0.52
NEK1-206ENST00000510533 CFAP221Q4G0U5 840 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 PPP1R21Q6ZMI0 780 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 KLHL7Q8IXQ5 586 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 NELFBQ8WX92 580 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 LRWD1Q9UFC0 647 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 MKRN1Q9UHC7 482 aaKnown RBP11.79□□□□□ -0.52
NEK1-206ENST00000510533 STK24Q9Y6E0 443 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 RAPGEF6Q8TEU7 1601 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 SYCP2Q9BX26 1530 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 CCDC169A6NNP5 214 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 GMNNO75496 209 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 ZNF790Q6PG37 636 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 KRT25Q7Z3Z0 450 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 KIFC2Q96AC6 838 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 TMEM63CQ9P1W3 806 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 CTTNBP2NLQ9P2B4 639 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 EXOC7Q9UPT5 735 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 PNMA6EA0A0J9YXQ4 647 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 CHL1O00533 1208 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 HARSP12081 509 aaKnown RBP11.79□□□□□ -0.52
NEK1-206ENST00000510533 HSPA1LP34931 641 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 SNX29Q8TEQ0 813 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 PHKBQ93100 1093 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 MRRFQ96E11 262 aaKnown RBP11.79□□□□□ -0.52
NEK1-206ENST00000510533 CABS1Q96KC9 395 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 FAM184BQ9ULE4 1060 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 DMRT2Q9Y5R5 561 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 TRPM2O94759 1503 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 COL17A1Q9UMD9 1497 aaPredicted RBP11.79□□□□□ -0.52
NEK1-206ENST00000510533 JAK2O60674 1132 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 HIBADHP31937 336 aaKnown RBP11.79□□□□□ -0.52
NEK1-206ENST00000510533 GBP1P32455 592 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 SEPT6Q14141 434 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 SND1Q7KZF4 910 aaKnown RBP eCLIP11.79□□□□□ -0.52
NEK1-206ENST00000510533 FCHSD1Q86WN1 690 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 SYCE1Q8N0S2 351 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 ASIC3Q9UHC3 531 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 ARHGEF12Q9NZN5 1544 aa11.79□□□□□ -0.52
NEK1-206ENST00000510533 PRDM1O75626 825 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 CA8P35219 290 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 IL13P35225 146 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 MTMR3Q13615 1198 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 TM6SF1Q9BZW5 370 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 KLHL30Q0D2K2 578 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 RPS6KA1Q15418 735 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 HERC4Q5GLZ8 1057 aaPredicted RBP11.78□□□□□ -0.52
NEK1-206ENST00000510533 VPS52Q8N1B4 723 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 VTI1AQ96AJ9 217 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 MYL10Q9BUA6 226 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 XPO4Q9C0E2 1151 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms