RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 HMX1Q9NP08 348 aaPredicted RBP15.93■□□□□ 0.14
TRAPPC12-216ENST00000469400 PA2G4Q9UQ80 394 aaKnown RBP15.93■□□□□ 0.14
TRAPPC12-216ENST00000469400 MROH7-TTC4A0A0A0MT08 1334 aa15.93■□□□□ 0.14
TRAPPC12-216ENST00000469400 ALPK3Q96L96 1907 aa15.92■□□□□ 0.14
TRAPPC12-216ENST00000469400 MYH2Q9UKX2 1941 aa15.92■□□□□ 0.14
TRAPPC12-216ENST00000469400 PHIPQ8WWQ0 1821 aa15.92■□□□□ 0.14
TRAPPC12-216ENST00000469400 GPR75-ASB3A0A0A6YYF3 556 aa15.92■□□□□ 0.14
TRAPPC12-216ENST00000469400 SYN1P17600 705 aa15.92■□□□□ 0.14
TRAPPC12-216ENST00000469400 MAGEA10P43363 369 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC12-216ENST00000469400 HMGCS2P54868 508 aa15.92■□□□□ 0.14
TRAPPC12-216ENST00000469400 TIMM10P62072 90 aa15.92■□□□□ 0.14
TRAPPC12-216ENST00000469400 LRIT3Q3SXY7 679 aa15.92■□□□□ 0.14
TRAPPC12-216ENST00000469400 SPTY2D1Q68D10 685 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC12-216ENST00000469400 OSBPL5Q9H0X9 879 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC12-216ENST00000469400 C11orf49Q9H6J7 331 aa15.92■□□□□ 0.14
TRAPPC12-216ENST00000469400 DOCK1Q14185 1865 aa15.92■□□□□ 0.14
TRAPPC12-216ENST00000469400 PDS5AQ29RF7 1337 aaKnown RBP15.92■□□□□ 0.14
TRAPPC12-216ENST00000469400 NPM3O75607 178 aaKnown RBP15.91■□□□□ 0.14
TRAPPC12-216ENST00000469400 MECOMQ03112 1051 aa15.91■□□□□ 0.14
TRAPPC12-216ENST00000469400 PABPC4Q13310 644 aaKnown RBP eCLIP15.91■□□□□ 0.14
TRAPPC12-216ENST00000469400 ZNF384Q8TF68 577 aa15.91■□□□□ 0.14
TRAPPC12-216ENST00000469400 ASCC2Q9H1I8 757 aaPredicted RBP15.91■□□□□ 0.14
TRAPPC12-216ENST00000469400 OGDHLQ9ULD0 1010 aa15.91■□□□□ 0.14
TRAPPC12-216ENST00000469400 RRP1BQ14684 758 aaKnown RBP15.9■□□□□ 0.14
TRAPPC12-216ENST00000469400 ERICH6Q7L0X2 663 aa15.9■□□□□ 0.14
TRAPPC12-216ENST00000469400 TDHQ8IZJ6 230 aa15.9■□□□□ 0.14
TRAPPC12-216ENST00000469400 TRIB2Q92519 343 aa15.9■□□□□ 0.14
TRAPPC12-216ENST00000469400 TBC1D2Q9BYX2 928 aa15.9■□□□□ 0.14
TRAPPC12-216ENST00000469400 COPRSQ9NQ92 184 aa15.9■□□□□ 0.14
TRAPPC12-216ENST00000469400 MTMR10Q9NXD2 777 aa15.9■□□□□ 0.14
TRAPPC12-216ENST00000469400 STXBP5LQ9Y2K9 1186 aa15.9■□□□□ 0.14
TRAPPC12-216ENST00000469400 CYP2B6P20813 491 aa15.89■□□□□ 0.13
TRAPPC12-216ENST00000469400 CAP2P40123 477 aa15.89■□□□□ 0.13
TRAPPC12-216ENST00000469400 SH3D19Q5HYK7 790 aa15.89■□□□□ 0.13
TRAPPC12-216ENST00000469400 XAGE2Q96GT9 111 aa15.89■□□□□ 0.13
TRAPPC12-216ENST00000469400 MORF4L1Q9UBU8 362 aa15.89■□□□□ 0.13
TRAPPC12-216ENST00000469400 A0A1B0GUL7 405 aa15.88■□□□□ 0.13
TRAPPC12-216ENST00000469400 USP17L5A8MUK1 530 aa15.88■□□□□ 0.13
TRAPPC12-216ENST00000469400 E9PSI1 815 aa15.88■□□□□ 0.13
TRAPPC12-216ENST00000469400 PRKAR2AP13861 404 aaKnown RBP15.88■□□□□ 0.13
TRAPPC12-216ENST00000469400 MAP3K21Q5TCX8 1036 aa15.88■□□□□ 0.13
TRAPPC12-216ENST00000469400 UBE2OQ9C0C9 1292 aaKnown RBP15.88■□□□□ 0.13
TRAPPC12-216ENST00000469400 PFASO15067 1338 aa15.88■□□□□ 0.13
TRAPPC12-216ENST00000469400 PEX10O60683 326 aa15.87■□□□□ 0.13
TRAPPC12-216ENST00000469400 MAP4K4O95819 1239 aaPredicted RBP15.87■□□□□ 0.13
TRAPPC12-216ENST00000469400 ALDH1L2Q3SY69 923 aa15.87■□□□□ 0.13
TRAPPC12-216ENST00000469400 AS3MTQ9HBK9 375 aa15.87■□□□□ 0.13
TRAPPC12-216ENST00000469400 SMC4Q9NTJ3 1288 aa15.87■□□□□ 0.13
TRAPPC12-216ENST00000469400 LOC285556D6RIA3 1793 aa15.86■□□□□ 0.13
TRAPPC12-216ENST00000469400 LDHCP07864 332 aa15.86■□□□□ 0.13
TRAPPC12-216ENST00000469400 XRCC5P13010 732 aaKnown RBP15.86■□□□□ 0.13
TRAPPC12-216ENST00000469400 IRX3P78415 501 aaPredicted RBP15.86■□□□□ 0.13
TRAPPC12-216ENST00000469400 GSTO1P78417 241 aa15.86■□□□□ 0.13
TRAPPC12-216ENST00000469400 TFCP2Q12800 502 aa15.86■□□□□ 0.13
TRAPPC12-216ENST00000469400 MTMR2Q13614 643 aa15.86■□□□□ 0.13
TRAPPC12-216ENST00000469400 MVPQ14764 893 aaKnown RBP15.86■□□□□ 0.13
TRAPPC12-216ENST00000469400 TBC1D9Q6ZT07 1266 aa15.86■□□□□ 0.13
TRAPPC12-216ENST00000469400 NSUN4Q96CB9 384 aaKnown RBP15.86■□□□□ 0.13
TRAPPC12-216ENST00000469400 P2RX7Q99572 595 aaKnown RBP15.86■□□□□ 0.13
TRAPPC12-216ENST00000469400 NUDT12Q9BQG2 462 aa15.86■□□□□ 0.13
TRAPPC12-216ENST00000469400 TXNRD2Q9NNW7 524 aa15.86■□□□□ 0.13
TRAPPC12-216ENST00000469400 HMG20BQ9P0W2 317 aa15.86■□□□□ 0.13
TRAPPC12-216ENST00000469400 HDAC5Q9UQL6 1122 aa15.86■□□□□ 0.13
TRAPPC12-216ENST00000469400 AKAP2Q9Y2D5 859 aa15.86■□□□□ 0.13
TRAPPC12-216ENST00000469400 DDX60LQ5H9U9 1706 aaKnown RBP15.85■□□□□ 0.13
TRAPPC12-216ENST00000469400 COL2A1P02458 1487 aaPredicted RBP15.85■□□□□ 0.13
TRAPPC12-216ENST00000469400 COL6A1P12109 1028 aa15.85■□□□□ 0.13
TRAPPC12-216ENST00000469400 HOXA7P31268 230 aaPredicted RBP15.85■□□□□ 0.13
TRAPPC12-216ENST00000469400 BACE1P56817 501 aa15.85■□□□□ 0.13
TRAPPC12-216ENST00000469400 SLFN5Q08AF3 891 aa15.85■□□□□ 0.13
TRAPPC12-216ENST00000469400 PI16Q6UXB8 463 aa15.85■□□□□ 0.13
TRAPPC12-216ENST00000469400 GPRC5AQ8NFJ5 357 aa15.85■□□□□ 0.13
TRAPPC12-216ENST00000469400 SOCS4Q8WXH5 440 aa15.85■□□□□ 0.13
TRAPPC12-216ENST00000469400 WDR18Q9BV38 432 aa15.85■□□□□ 0.13
TRAPPC12-216ENST00000469400 HERC5Q9UII4 1024 aaKnown RBP15.85■□□□□ 0.13
TRAPPC12-216ENST00000469400 CACNB2Q08289 660 aaPredicted RBP15.84■□□□□ 0.13
TRAPPC12-216ENST00000469400 TEX11Q8IYF3 940 aa15.84■□□□□ 0.13
TRAPPC12-216ENST00000469400 SPATA5Q8NB90 893 aa15.84■□□□□ 0.13
TRAPPC12-216ENST00000469400 NEUROD6Q96NK8 337 aa15.84■□□□□ 0.13
TRAPPC12-216ENST00000469400 MEIS3Q99687 375 aa15.84■□□□□ 0.13
TRAPPC12-216ENST00000469400 TMOD4Q9NZQ9 345 aa15.84■□□□□ 0.13
TRAPPC12-216ENST00000469400 RAI14Q9P0K7 980 aa15.84■□□□□ 0.13
TRAPPC12-216ENST00000469400 PI4KBQ9UBF8 816 aa15.84■□□□□ 0.13
TRAPPC12-216ENST00000469400 NOB1Q9ULX3 412 aaKnown RBP15.84■□□□□ 0.13
TRAPPC12-216ENST00000469400 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.84■□□□□ 0.13
TRAPPC12-216ENST00000469400 PLXNB2O15031 1838 aa15.83■□□□□ 0.12
TRAPPC12-216ENST00000469400 ZKSCAN1P17029 563 aaPredicted RBP15.83■□□□□ 0.12
TRAPPC12-216ENST00000469400 HERVK_113P62684 666 aa15.83■□□□□ 0.12
TRAPPC12-216ENST00000469400 JAG1P78504 1218 aa15.83■□□□□ 0.12
TRAPPC12-216ENST00000469400 LRRC26Q2I0M4 334 aa15.83■□□□□ 0.12
TRAPPC12-216ENST00000469400 Q3C1V9 767 aa15.83■□□□□ 0.12
TRAPPC12-216ENST00000469400 LHX8Q68G74 356 aa15.83■□□□□ 0.12
TRAPPC12-216ENST00000469400 TRMT44Q8IYL2 757 aaKnown RBP15.83■□□□□ 0.12
TRAPPC12-216ENST00000469400 SH3RF3Q8TEJ3 882 aaPredicted RBP15.83■□□□□ 0.12
TRAPPC12-216ENST00000469400 USP6NLQ92738 828 aa15.83■□□□□ 0.12
TRAPPC12-216ENST00000469400 RBPJLQ9UBG7 517 aa15.83■□□□□ 0.12
TRAPPC12-216ENST00000469400 SRGAP3O43295 1099 aa15.82■□□□□ 0.12
TRAPPC12-216ENST00000469400 ASNSP08243 561 aa15.82■□□□□ 0.12
TRAPPC12-216ENST00000469400 CCND3P30281 292 aaPredicted RBP15.82■□□□□ 0.12
TRAPPC12-216ENST00000469400 MAPK4P31152 587 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms