RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 MCTP2Q6DN12 878 aa10.21□□□□□ -0.78
PBRM1-208ENST00000410007 MYL10Q9BUA6 226 aa10.21□□□□□ -0.78
PBRM1-208ENST00000410007 COMMD10Q9Y6G5 202 aa10.21□□□□□ -0.78
PBRM1-208ENST00000410007 SYNMO15061 1565 aa10.21□□□□□ -0.78
PBRM1-208ENST00000410007 SEMA3EO15041 775 aa10.21□□□□□ -0.78
PBRM1-208ENST00000410007 MYCLP12524 364 aaPredicted RBP10.21□□□□□ -0.78
PBRM1-208ENST00000410007 IFNL3Q8IZI9 196 aa10.21□□□□□ -0.78
PBRM1-208ENST00000410007 REXO1Q8N1G1 1221 aaKnown RBP10.21□□□□□ -0.78
PBRM1-208ENST00000410007 IFNKQ9P0W0 207 aa10.21□□□□□ -0.78
PBRM1-208ENST00000410007 DNAI1Q9UI46 699 aa10.21□□□□□ -0.78
PBRM1-208ENST00000410007 LEMD3Q9Y2U8 911 aa10.21□□□□□ -0.78
PBRM1-208ENST00000410007 BCAMP50895 628 aa10.2□□□□□ -0.78
PBRM1-208ENST00000410007 DPY19L2Q6NUT2 758 aa10.2□□□□□ -0.78
PBRM1-208ENST00000410007 NOD1Q9Y239 953 aa10.2□□□□□ -0.78
PBRM1-208ENST00000410007 CSADQ9Y600 493 aa10.2□□□□□ -0.78
PBRM1-208ENST00000410007 RNF123Q5XPI4 1314 aa10.2□□□□□ -0.78
PBRM1-208ENST00000410007 RXRBP28702 533 aa10.2□□□□□ -0.78
PBRM1-208ENST00000410007 ZNF654Q8IZM8 581 aa10.2□□□□□ -0.78
PBRM1-208ENST00000410007 SNX29Q8TEQ0 813 aa10.2□□□□□ -0.78
PBRM1-208ENST00000410007 SRRTQ9BXP5 876 aaKnown RBP10.2□□□□□ -0.78
PBRM1-208ENST00000410007 ZSWIM4Q9H7M6 989 aa10.2□□□□□ -0.78
PBRM1-208ENST00000410007 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.2□□□□□ -0.78
PBRM1-208ENST00000410007 ARHGAP31Q2M1Z3 1444 aa10.2□□□□□ -0.78
PBRM1-208ENST00000410007 ZNF804BA4D1E1 1349 aa10.2□□□□□ -0.78
PBRM1-208ENST00000410007 XDHP47989 1333 aa10.2□□□□□ -0.78
PBRM1-208ENST00000410007 CCDC169A6NNP5 214 aa10.2□□□□□ -0.78
PBRM1-208ENST00000410007 UBE3CQ15386 1083 aa10.2□□□□□ -0.78
PBRM1-208ENST00000410007 LRRC24Q50LG9 513 aa10.2□□□□□ -0.78
PBRM1-208ENST00000410007 DCAF17Q5H9S7 520 aaPredicted RBP10.2□□□□□ -0.78
PBRM1-208ENST00000410007 WDR44Q5JSH3 913 aa10.2□□□□□ -0.78
PBRM1-208ENST00000410007 MAATS1Q7Z4T9 603 aa10.2□□□□□ -0.78
PBRM1-208ENST00000410007 RGS22Q8NE09 1264 aa10.2□□□□□ -0.78
PBRM1-208ENST00000410007 PHKBQ93100 1093 aa10.2□□□□□ -0.78
PBRM1-208ENST00000410007 EDC3Q96F86 508 aaKnown RBP10.2□□□□□ -0.78
PBRM1-208ENST00000410007 ZNF274Q96GC6 653 aaPredicted RBP10.2□□□□□ -0.78
PBRM1-208ENST00000410007 TSNARE1Q96NA8 513 aa10.2□□□□□ -0.78
PBRM1-208ENST00000410007 GREM2Q9H772 168 aa10.2□□□□□ -0.78
PBRM1-208ENST00000410007 THRAP3Q9Y2W1 955 aaKnown RBP10.2□□□□□ -0.78
PBRM1-208ENST00000410007 CTAGE9A4FU28 777 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 CETN3O15182 167 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 ECM2O94769 699 aaPredicted RBP10.19□□□□□ -0.78
PBRM1-208ENST00000410007 CFBP00751 764 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 PCP11498 1178 aaKnown RBP10.19□□□□□ -0.78
PBRM1-208ENST00000410007 BIRC3Q13489 604 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 CTR9Q6PD62 1173 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 HOMER2Q9NSB8 354 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 PNMA2Q9UL42 364 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 PRDM15P57071 1507 aaPredicted RBP10.19□□□□□ -0.78
PBRM1-208ENST00000410007 EEF2P13639 858 aaKnown RBP10.19□□□□□ -0.78
PBRM1-208ENST00000410007 VWA3BQ502W6 1294 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 FAM47AQ5JRC9 791 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 NCAPH2Q6IBW4 605 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 CCDC155Q8N6L0 562 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 AZI2Q9H6S1 392 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 ATP8A2Q9NTI2 1148 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 DNM3Q9UQ16 869 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 ABCC3O15438 1527 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 PABPN1LA6NDY0 278 aaKnown RBP10.19□□□□□ -0.78
PBRM1-208ENST00000410007 STRN3Q13033 797 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 PRKG1Q13976 671 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 NOLC1Q14978 699 aaKnown RBP eCLIP10.19□□□□□ -0.78
PBRM1-208ENST00000410007 CALCRLQ16602 461 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 MLKLQ8NB16 471 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 NOC4LQ9BVI4 516 aaKnown RBP10.19□□□□□ -0.78
PBRM1-208ENST00000410007 KCNG1Q9UIX4 513 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 CALUO43852 315 aaPredicted RBP10.19□□□□□ -0.78
PBRM1-208ENST00000410007 TUBB4BP68371 445 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 OTUD7BQ6GQQ9 843 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 KRT27Q7Z3Y8 459 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 CEP112Q8N8E3 955 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 CHD1O14646 1710 aa10.19□□□□□ -0.78
PBRM1-208ENST00000410007 SHROOM2Q13796 1616 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 ERVV-1B6SEH8 477 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 ATP2A1O14983 1001 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 POLR2DO15514 142 aaKnown RBP10.18□□□□□ -0.78
PBRM1-208ENST00000410007 TBC1D8BQ0IIM8 1120 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 TRIM14Q14142 442 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 USH1GQ495M9 461 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 ZSCAN10Q96SZ4 725 aaPredicted RBP10.18□□□□□ -0.78
PBRM1-208ENST00000410007 A0A0D9SFI3 127 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 BBOX1O75936 387 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 DPH6Q7L8W6 267 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 KIAA0825Q8IV33 1275 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 UNC5CLQ8IV45 518 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 CCDC77Q9BR77 488 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 RRP9O43818 475 aaKnown RBP10.18□□□□□ -0.78
PBRM1-208ENST00000410007 HSPD1P10809 573 aaKnown RBP10.18□□□□□ -0.78
PBRM1-208ENST00000410007 RAPGEF1Q13905 1077 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 GPR162Q16538 588 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 PROSER3Q2NL68 480 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 CDAN1Q8IWY9 1227 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 LEO1Q8WVC0 666 aaPredicted RBP10.18□□□□□ -0.78
PBRM1-208ENST00000410007 KIFAP3Q92845 792 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 GTF3C6Q969F1 213 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 CLSTN2Q9H4D0 955 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 ZNF335Q9H4Z2 1342 aaPredicted RBP10.18□□□□□ -0.78
PBRM1-208ENST00000410007 TRIM37O94972 964 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 STAMBPO95630 424 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 SERPINB2P05120 415 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 XRCC6P12956 609 aaKnown RBP eCLIP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms