RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 EFCC1Q9HA90 598 aa18.25■□□□□ 0.51
SREBF1-201ENST00000261646 SHROOM2Q13796 1616 aa18.25■□□□□ 0.51
SREBF1-201ENST00000261646 TULP4Q9NRJ4 1543 aa18.25■□□□□ 0.51
SREBF1-201ENST00000261646 HSPD1P10809 573 aaKnown RBP18.25■□□□□ 0.51
SREBF1-201ENST00000261646 ESR2Q92731 530 aa18.25■□□□□ 0.51
SREBF1-201ENST00000261646 FAM89AQ96GI7 184 aa18.25■□□□□ 0.51
SREBF1-201ENST00000261646 MKNK2Q9HBH9 465 aa18.25■□□□□ 0.51
SREBF1-201ENST00000261646 TCERG1LQ5VWI1 586 aa18.24■□□□□ 0.51
SREBF1-201ENST00000261646 ADCY9O60503 1353 aa18.24■□□□□ 0.51
SREBF1-201ENST00000261646 TLDC2A0PJX2 215 aa18.24■□□□□ 0.51
SREBF1-201ENST00000261646 IFIT1BQ5T764 474 aaKnown RBP18.24■□□□□ 0.51
SREBF1-201ENST00000261646 CALML4Q96GE6 196 aa18.24■□□□□ 0.51
SREBF1-201ENST00000261646 UBA5Q9GZZ9 404 aa18.24■□□□□ 0.51
SREBF1-201ENST00000261646 TCEAL9Q9UHQ7 104 aa18.24■□□□□ 0.51
SREBF1-201ENST00000261646 ZMYND10O75800 440 aa18.24■□□□□ 0.51
SREBF1-201ENST00000261646 METTL22Q9BUU2 404 aaPredicted RBP18.24■□□□□ 0.51
SREBF1-201ENST00000261646 AK9Q5TCS8 1911 aa18.24■□□□□ 0.51
SREBF1-201ENST00000261646 GLI2P10070 1586 aa18.23■□□□□ 0.51
SREBF1-201ENST00000261646 CYP2C19P33261 490 aa18.23■□□□□ 0.51
SREBF1-201ENST00000261646 TOB2Q14106 344 aaPredicted RBP18.23■□□□□ 0.51
SREBF1-201ENST00000261646 INCENPQ9NQS7 918 aa18.23■□□□□ 0.51
SREBF1-201ENST00000261646 ARHGEF10O15013 1369 aa18.23■□□□□ 0.51
SREBF1-201ENST00000261646 EYA2O00167 538 aa18.23■□□□□ 0.51
SREBF1-201ENST00000261646 AP5Z1O43299 807 aa18.23■□□□□ 0.51
SREBF1-201ENST00000261646 TRIM14Q14142 442 aa18.23■□□□□ 0.51
SREBF1-201ENST00000261646 TTC19Q6DKK2 380 aaPredicted RBP18.23■□□□□ 0.51
SREBF1-201ENST00000261646 APPBP2Q92624 585 aa18.23■□□□□ 0.51
SREBF1-201ENST00000261646 OSBPL5Q9H0X9 879 aaPredicted RBP18.23■□□□□ 0.51
SREBF1-201ENST00000261646 IL25Q9H293 177 aa18.23■□□□□ 0.51
SREBF1-201ENST00000261646 NEO1Q92859 1461 aa18.23■□□□□ 0.51
SREBF1-201ENST00000261646 KRT2P35908 639 aa18.23■□□□□ 0.51
SREBF1-201ENST00000261646 SPAG5Q96R06 1193 aa18.23■□□□□ 0.51
SREBF1-201ENST00000261646 GOLPH3LQ9H4A5 285 aa18.23■□□□□ 0.51
SREBF1-201ENST00000261646 TSPY2A6NKD2 308 aa18.23■□□□□ 0.51
SREBF1-201ENST00000261646 RNF40O75150 1001 aa18.23■□□□□ 0.51
SREBF1-201ENST00000261646 ATP1A2P50993 1020 aa18.23■□□□□ 0.51
SREBF1-201ENST00000261646 SLC39A14Q15043 492 aa18.23■□□□□ 0.51
SREBF1-201ENST00000261646 WWC2Q6AWC2 1192 aa18.23■□□□□ 0.51
SREBF1-201ENST00000261646 TMX4Q9H1E5 349 aaPredicted RBP18.23■□□□□ 0.51
SREBF1-201ENST00000261646 DBNLQ9UJU6 430 aaKnown RBP18.23■□□□□ 0.51
SREBF1-201ENST00000261646 IGSF1Q8N6C5 1336 aa18.23■□□□□ 0.51
SREBF1-201ENST00000261646 PNPLA6Q8IY17 1366 aa18.23■□□□□ 0.51
SREBF1-201ENST00000261646 ATP6V1AP38606 617 aa18.22■□□□□ 0.51
SREBF1-201ENST00000261646 VSTM4Q8IW00 320 aa18.22■□□□□ 0.51
SREBF1-201ENST00000261646 ABCB6Q9NP58 842 aa18.22■□□□□ 0.51
SREBF1-201ENST00000261646 GCOM1H8Y6P7 765 aaPredicted RBP18.22■□□□□ 0.51
SREBF1-201ENST00000261646 ENC1O14682 589 aa18.22■□□□□ 0.51
SREBF1-201ENST00000261646 MYZAPP0CAP1 466 aa18.22■□□□□ 0.51
SREBF1-201ENST00000261646 PAK1Q13153 545 aa18.22■□□□□ 0.51
SREBF1-201ENST00000261646 E4F1Q66K89 784 aaPredicted RBP18.22■□□□□ 0.51
SREBF1-201ENST00000261646 SPTY2D1Q68D10 685 aaPredicted RBP18.22■□□□□ 0.51
SREBF1-201ENST00000261646 POLR3EQ9NVU0 708 aa18.22■□□□□ 0.51
SREBF1-201ENST00000261646 SMIM23A6NLE4 172 aa18.21■□□□□ 0.51
SREBF1-201ENST00000261646 CASP14P31944 242 aa18.21■□□□□ 0.51
SREBF1-201ENST00000261646 SF3A3Q12874 501 aaKnown RBP eCLIP18.21■□□□□ 0.514e-7■■■■□ 20.8
SREBF1-201ENST00000261646 TMEM87BQ96K49 555 aa18.21■□□□□ 0.51
SREBF1-201ENST00000261646 CAPS2Q9BXY5 557 aa18.21■□□□□ 0.51
SREBF1-201ENST00000261646 LRRC7Q96NW7 1537 aa18.21■□□□□ 0.51
SREBF1-201ENST00000261646 CARMIL3Q8ND23 1372 aa18.21■□□□□ 0.51
SREBF1-201ENST00000261646 TRIM66O15016 1216 aa18.21■□□□□ 0.51
SREBF1-201ENST00000261646 UQCRFS1P1P0C7P4 283 aa18.21■□□□□ 0.51
SREBF1-201ENST00000261646 ARHGAP25P42331 645 aa18.21■□□□□ 0.51
SREBF1-201ENST00000261646 CCZ1BP86790 482 aa18.21■□□□□ 0.51
SREBF1-201ENST00000261646 CCZ1P86791 482 aaPredicted RBP18.21■□□□□ 0.51
SREBF1-201ENST00000261646 POLA2Q14181 598 aa18.21■□□□□ 0.51
SREBF1-201ENST00000261646 CASP8Q14790 479 aa18.21■□□□□ 0.51
SREBF1-201ENST00000261646 IQCB1Q15051 598 aa18.21■□□□□ 0.51
SREBF1-201ENST00000261646 ICE2Q659A1 982 aa18.21■□□□□ 0.51
SREBF1-201ENST00000261646 SECISBP2LQ93073 1101 aaKnown RBP18.21■□□□□ 0.51
SREBF1-201ENST00000261646 BLZF1Q9H2G9 400 aa18.21■□□□□ 0.51
SREBF1-201ENST00000261646 VAT1LQ9HCJ6 419 aa18.21■□□□□ 0.51
SREBF1-201ENST00000261646 A0A1B0GUA9 196 aa18.21■□□□□ 0.51
SREBF1-201ENST00000261646 SOWAHDA6NJG2 315 aa18.21■□□□□ 0.51
SREBF1-201ENST00000261646 BTBD18B2RXH4 712 aa18.21■□□□□ 0.51
SREBF1-201ENST00000261646 ZCRB1Q8TBF4 217 aaKnown RBP18.21■□□□□ 0.51
SREBF1-201ENST00000261646 CABS1Q96KC9 395 aa18.21■□□□□ 0.51
SREBF1-201ENST00000261646 GSTTP1A0A1W2PQM5 241 aa18.2■□□□□ 0.5
SREBF1-201ENST00000261646 KIF5BP33176 963 aa18.2■□□□□ 0.5
SREBF1-201ENST00000261646 ST5P78524 1137 aa18.2■□□□□ 0.5
SREBF1-201ENST00000261646 MIGA1Q8NAN2 632 aa18.2■□□□□ 0.5
SREBF1-201ENST00000261646 OR8K1Q8NGG5 319 aa18.2■□□□□ 0.5
SREBF1-201ENST00000261646 RAB34Q9BZG1 259 aa18.2■□□□□ 0.5
SREBF1-201ENST00000261646 SEC63Q9UGP8 760 aaKnown RBP18.2■□□□□ 0.5
SREBF1-201ENST00000261646 ZRSR2Q15696 482 aaKnown RBP18.2■□□□□ 0.5
SREBF1-201ENST00000261646 ARMCX5Q6P1M9 558 aa18.2■□□□□ 0.5
SREBF1-201ENST00000261646 GJB4Q9NTQ9 266 aa18.2■□□□□ 0.5
SREBF1-201ENST00000261646 TMEM266Q2M3C6 531 aa18.2■□□□□ 0.5
SREBF1-201ENST00000261646 ANKS4BQ8N8V4 417 aa18.2■□□□□ 0.5
SREBF1-201ENST00000261646 CDC5LQ99459 802 aaKnown RBP18.2■□□□□ 0.5
SREBF1-201ENST00000261646 SELENOSQ9BQE4 189 aa18.2■□□□□ 0.5
SREBF1-201ENST00000261646 SETD1BQ9UPS6 1966 aaKnown RBP18.2■□□□□ 0.5
SREBF1-201ENST00000261646 ATP7BP35670 1465 aa18.2■□□□□ 0.5
SREBF1-201ENST00000261646 ANKRD62A6NC57 917 aa18.2■□□□□ 0.5
SREBF1-201ENST00000261646 DEXIO95424 95 aa18.2■□□□□ 0.5
SREBF1-201ENST00000261646 CYP7A1P22680 504 aa18.2■□□□□ 0.5
SREBF1-201ENST00000261646 hCG_1642624A0A1W2PR95 340 aa18.19■□□□□ 0.5
SREBF1-201ENST00000261646 GIGYF2Q6Y7W6 1299 aaKnown RBP18.19■□□□□ 0.5
SREBF1-201ENST00000261646 CCDC51Q96ER9 411 aa18.19■□□□□ 0.5
SREBF1-201ENST00000261646 NOC4LQ9BVI4 516 aaKnown RBP18.19■□□□□ 0.5
SREBF1-201ENST00000261646 USP6P35125 1406 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms