RNA–Protein interactions for RNA: ENST00000622464.4

AGAP3-226, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-226ENST00000622464 KRTAP10-8P60410 259 aa7.03□□□□□ -1.28
AGAP3-226ENST00000622464 A8MUU9 505 aa7.01□□□□□ -1.29
AGAP3-226ENST00000622464 C20orf166-AS1Q96NR2 134 aa7.01□□□□□ -1.29
AGAP3-226ENST00000622464 LPAP08519 4548 aa6.99□□□□□ -1.29
AGAP3-226ENST00000622464 KRTAP4-5Q9BYR2 181 aa6.98□□□□□ -1.29
AGAP3-226ENST00000622464 ABCA13Q86UQ4 5058 aa6.98□□□□□ -1.29
AGAP3-226ENST00000622464 LRP2P98164 4655 aa6.94□□□□□ -1.3
AGAP3-226ENST00000622464 MT1HL1P0DM35 61 aa6.94□□□□□ -1.3
AGAP3-226ENST00000622464 KRTAP3-1Q9BYR8 98 aa6.93□□□□□ -1.3
AGAP3-226ENST00000622464 XP32Q5T750 250 aa6.88□□□□□ -1.31
AGAP3-226ENST00000622464 CRIPTQ9P021 101 aa6.83□□□□□ -1.32
AGAP3-226ENST00000622464 ROMO1P60602 79 aa6.83□□□□□ -1.32
AGAP3-226ENST00000622464 RPL37P61927 97 aaKnown RBP6.81□□□□□ -1.32
AGAP3-226ENST00000622464 KRTAP25-1Q3LHN0 102 aa6.81□□□□□ -1.32
AGAP3-226ENST00000622464 HERC2O95714 4834 aa6.78□□□□□ -1.32
AGAP3-226ENST00000622464 H0YAA0 97 aa6.76□□□□□ -1.33
AGAP3-226ENST00000622464 COX6B2Q6YFQ2 88 aa6.76□□□□□ -1.33
AGAP3-226ENST00000622464 P0C880 135 aa6.69□□□□□ -1.34
AGAP3-226ENST00000622464 A0A0A0MQY5 61 aa6.67□□□□□ -1.34
AGAP3-226ENST00000622464 A0A1B0GU33 70 aa6.63□□□□□ -1.35
AGAP3-226ENST00000622464 J3QL48 77 aa6.63□□□□□ -1.35
AGAP3-226ENST00000622464 KRTAP3-3Q9BYR6 98 aa6.62□□□□□ -1.35
AGAP3-226ENST00000622464 MUC2Q02817 5179 aa6.62□□□□□ -1.35
AGAP3-226ENST00000622464 BIRC6Q9NR09 4857 aa6.6□□□□□ -1.35
AGAP3-226ENST00000622464 TPRXLQ17RH7 258 aa6.6□□□□□ -1.35
AGAP3-226ENST00000622464 HERC1Q15751 4861 aa6.59□□□□□ -1.35
AGAP3-226ENST00000622464 S4R3F8 94 aa6.57□□□□□ -1.36
AGAP3-226ENST00000622464 H1FX-AS1Q4G0G2 97 aa6.55□□□□□ -1.36
AGAP3-226ENST00000622464 SPINT4Q6UDR6 99 aa6.55□□□□□ -1.36
AGAP3-226ENST00000622464 NDUFAF8A1L188 74 aa6.54□□□□□ -1.36
AGAP3-226ENST00000622464 PCLOQ9Y6V0 5065 aa6.54□□□□□ -1.36
AGAP3-226ENST00000622464 MUC17Q685J3 4493 aa6.49□□□□□ -1.37
AGAP3-226ENST00000622464 K7ERS5 55 aa6.49□□□□□ -1.37
AGAP3-226ENST00000622464 KRTAP4-1Q9BYQ7 146 aa6.49□□□□□ -1.37
AGAP3-226ENST00000622464 KRTAP10-6P60371 365 aaPredicted RBP6.48□□□□□ -1.37
AGAP3-226ENST00000622464 A0A0D9SG42 100 aa6.48□□□□□ -1.37
AGAP3-226ENST00000622464 KRTAP13-4Q3LI77 160 aa6.47□□□□□ -1.37
AGAP3-226ENST00000622464 KRTAP3-2Q9BYR7 98 aa6.45□□□□□ -1.38
AGAP3-226ENST00000622464 C10orf95Q9H7T3 257 aa6.41□□□□□ -1.38
AGAP3-226ENST00000622464 SEC61BP60468 96 aaKnown RBP6.37□□□□□ -1.39
AGAP3-226ENST00000622464 HMCN2Q8NDA2 5059 aa6.33□□□□□ -1.4
AGAP3-226ENST00000622464 FAT4Q6V0I7 4981 aa6.32□□□□□ -1.4
AGAP3-226ENST00000622464 KRTAP15-1Q3LI76 137 aa6.31□□□□□ -1.4
AGAP3-226ENST00000622464 RNF213Q63HN8 5207 aa6.29□□□□□ -1.4
AGAP3-226ENST00000622464 LORP23490 312 aaPredicted RBP6.23□□□□□ -1.41
AGAP3-226ENST00000622464 UBR4Q5T4S7 5183 aa6.23□□□□□ -1.41
AGAP3-226ENST00000622464 KRTAP12-2P59991 146 aa6.22□□□□□ -1.41
AGAP3-226ENST00000622464 KRTAP19-2Q3LHN2 52 aa6.21□□□□□ -1.42
AGAP3-226ENST00000622464 LUZP6Q538Z0 58 aa6.18□□□□□ -1.42
AGAP3-226ENST00000622464 M0QZ58 72 aa6.17□□□□□ -1.42
AGAP3-226ENST00000622464 KRTAP12-1P59990 96 aa6.13□□□□□ -1.43
AGAP3-226ENST00000622464 R4GN34 69 aa6.12□□□□□ -1.43
AGAP3-226ENST00000622464 FLGP20930 4061 aaPredicted RBP6.1□□□□□ -1.43
AGAP3-226ENST00000622464 LCE2CQ5TA81 110 aa5.97□□□□□ -1.45
AGAP3-226ENST00000622464 M0R2T5 61 aa5.93□□□□□ -1.46
AGAP3-226ENST00000622464 PLAC4Q8WY50 150 aa5.84□□□□□ -1.47
AGAP3-226ENST00000622464 MT1HP80294 61 aa5.83□□□□□ -1.48
AGAP3-226ENST00000622464 CAMK2N1Q7Z7J9 78 aa5.81□□□□□ -1.48
AGAP3-226ENST00000622464 MT1FP04733 61 aa5.72□□□□□ -1.49
AGAP3-226ENST00000622464 KRTAP10-10P60014 251 aa5.71□□□□□ -1.5
AGAP3-226ENST00000622464 MT2AP02795 61 aa5.69□□□□□ -1.5
AGAP3-226ENST00000622464 KRTAP19-1Q8IUB9 90 aa5.68□□□□□ -1.5
AGAP3-226ENST00000622464 KRTAP9-8Q9BYQ0 159 aa5.65□□□□□ -1.51
AGAP3-226ENST00000622464 SPRR2GQ9BYE4 73 aa5.59□□□□□ -1.51
AGAP3-226ENST00000622464 USH2AO75445 5202 aa5.55□□□□□ -1.52
AGAP3-226ENST00000622464 TNP1P09430 55 aa5.46□□□□□ -1.53
AGAP3-226ENST00000622464 PP632Q6XCG6 107 aa5.43□□□□□ -1.54
AGAP3-226ENST00000622464 MT1BP07438 61 aa5.43□□□□□ -1.54
AGAP3-226ENST00000622464 KRTAP9-3Q9BYQ3 159 aa5.4□□□□□ -1.54
AGAP3-226ENST00000622464 KRTAP19-8Q3LI54 63 aa5.36□□□□□ -1.55
AGAP3-226ENST00000622464 MT1XP80297 61 aa5.33□□□□□ -1.56
AGAP3-226ENST00000622464 KRTAP10-5P60370 271 aa5.33□□□□□ -1.56
AGAP3-226ENST00000622464 LCE3AQ5TA76 89 aa5.32□□□□□ -1.56
AGAP3-226ENST00000622464 KMT2DO14686 5537 aa5.32□□□□□ -1.56
AGAP3-226ENST00000622464 LCE2BO14633 110 aa5.31□□□□□ -1.56
AGAP3-226ENST00000622464 FSIP2Q5CZC0 6907 aa5.3□□□□□ -1.56
AGAP3-226ENST00000622464 LCE2AQ5TA79 106 aaPredicted RBP5.29□□□□□ -1.56
AGAP3-226ENST00000622464 SPRR5A0A1B0GTR4 108 aa5.26□□□□□ -1.57
AGAP3-226ENST00000622464 KRTAP10-7P60409 375 aaPredicted RBP5.24□□□□□ -1.57
AGAP3-226ENST00000622464 PRO2289Q9P1D8 64 aa5.16□□□□□ -1.58
AGAP3-226ENST00000622464 KRTAP10-12P60413 245 aa5.14□□□□□ -1.59
AGAP3-226ENST00000622464 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
AGAP3-226ENST00000622464 SSPOA2VEC9 5147 aa5.07□□□□□ -1.6
AGAP3-226ENST00000622464 KRTAP4-8A0A0G2JLE6 195 aa5.05□□□□□ -1.6
AGAP3-226ENST00000622464 KRTAP4-8Q9BYQ9 185 aa5.05□□□□□ -1.6
AGAP3-226ENST00000622464 KRTAP8-1Q8IUC2 63 aa5.03□□□□□ -1.6
AGAP3-226ENST00000622464 KRTAP12-3P60328 96 aa5.02□□□□□ -1.61
AGAP3-226ENST00000622464 INE1O15225 51 aa4.96□□□□□ -1.62
AGAP3-226ENST00000622464 KRTAP19-5Q3LI72 72 aa4.95□□□□□ -1.62
AGAP3-226ENST00000622464 FCGBPQ9Y6R7 5405 aaPredicted RBP4.78□□□□□ -1.64
AGAP3-226ENST00000622464 KRTAP4-7Q9BYR0 210 aa4.77□□□□□ -1.65
AGAP3-226ENST00000622464 KRTAP19-7Q3SYF9 63 aa4.75□□□□□ -1.65
AGAP3-226ENST00000622464 MUC12Q9UKN1 5478 aa4.74□□□□□ -1.65
AGAP3-226ENST00000622464 KRTAP19-6Q3LI70 58 aa4.7□□□□□ -1.66
AGAP3-226ENST00000622464 LCE3CQ5T5A8 94 aa4.68□□□□□ -1.66
AGAP3-226ENST00000622464 MT1EP04732 61 aa4.61□□□□□ -1.67
AGAP3-226ENST00000622464 KRTAP9-6A8MVA2 160 aa4.61□□□□□ -1.67
AGAP3-226ENST00000622464 MACF1Q9UPN3 7388 aaKnown RBP4.59□□□□□ -1.67
AGAP3-226ENST00000622464 DSTQ03001 7570 aaKnown RBP4.58□□□□□ -1.68
AGAP3-226ENST00000622464 MT1LQ93083 61 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms