RNA–Protein interactions for RNA: ENST00000399537.8

TNRC18-203, Transcript of trinucleotide repeat containing 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC18, Length 10,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-203ENST00000399537 KRTAP10-4P60372 401 aaPredicted RBP6.1□□□□□ -1.43
TNRC18-203ENST00000399537 KRTAP4-5Q9BYR2 181 aa6.05□□□□□ -1.44
TNRC18-203ENST00000399537 KRTAP8-1Q8IUC2 63 aa6.05□□□□□ -1.44
TNRC18-203ENST00000399537 HECTD4Q9Y4D8 3996 aa6.02□□□□□ -1.45
TNRC18-203ENST00000399537 ZNF469Q96JG9 3925 aaPredicted RBP6.02□□□□□ -1.45
TNRC18-203ENST00000399537 DNAH7Q8WXX0 4024 aa6□□□□□ -1.45
TNRC18-203ENST00000399537 LORP23490 312 aaPredicted RBP5.97□□□□□ -1.45
TNRC18-203ENST00000399537 DNAH1Q9P2D7 4330 aa5.92□□□□□ -1.46
TNRC18-203ENST00000399537 DNAH3Q8TD57 4116 aa5.92□□□□□ -1.46
TNRC18-203ENST00000399537 ANK3Q12955 4377 aaKnown RBP5.92□□□□□ -1.46
TNRC18-203ENST00000399537 HUWE1Q7Z6Z7 4374 aaKnown RBP5.87□□□□□ -1.47
TNRC18-203ENST00000399537 ANK2Q01484 3957 aa5.87□□□□□ -1.47
TNRC18-203ENST00000399537 CMYA5Q8N3K9 4069 aa5.78□□□□□ -1.48
TNRC18-203ENST00000399537 DNAH2Q9P225 4427 aa5.78□□□□□ -1.48
TNRC18-203ENST00000399537 VPS13BQ7Z7G8 4022 aa5.7□□□□□ -1.5
TNRC18-203ENST00000399537 KRTAP10-7P60409 375 aaPredicted RBP5.63□□□□□ -1.51
TNRC18-203ENST00000399537 KRTAP4-1Q9BYQ7 146 aa5.59□□□□□ -1.52
TNRC18-203ENST00000399537 SPRR2FQ96RM1 72 aa5.58□□□□□ -1.52
TNRC18-203ENST00000399537 KRTAP19-5Q3LI72 72 aa5.57□□□□□ -1.52
TNRC18-203ENST00000399537 MT1HP80294 61 aa5.56□□□□□ -1.52
TNRC18-203ENST00000399537 DNAH10Q8IVF4 4471 aa5.52□□□□□ -1.53
TNRC18-203ENST00000399537 LCE3CQ5T5A8 94 aa5.52□□□□□ -1.53
TNRC18-203ENST00000399537 KMT2AQ03164 3969 aa5.52□□□□□ -1.53
TNRC18-203ENST00000399537 SPRR2GQ9BYE4 73 aa5.51□□□□□ -1.53
TNRC18-203ENST00000399537 DNAH6Q9C0G6 4158 aa5.51□□□□□ -1.53
TNRC18-203ENST00000399537 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
TNRC18-203ENST00000399537 MT2AP02795 61 aa5.48□□□□□ -1.53
TNRC18-203ENST00000399537 MT1FP04733 61 aa5.38□□□□□ -1.55
TNRC18-203ENST00000399537 PRKDCP78527 4128 aaKnown RBP5.32□□□□□ -1.56
TNRC18-203ENST00000399537 DNAH11Q96DT5 4516 aa5.31□□□□□ -1.56
TNRC18-203ENST00000399537 FRAS1Q86XX4 4008 aa5.29□□□□□ -1.56
TNRC18-203ENST00000399537 LCE3BQ5TA77 95 aa5.29□□□□□ -1.56
TNRC18-203ENST00000399537 FLGP20930 4061 aaPredicted RBP5.25□□□□□ -1.57
TNRC18-203ENST00000399537 SPRR2EP22531 72 aa5.25□□□□□ -1.57
TNRC18-203ENST00000399537 SPRR2BP35325 72 aa5.25□□□□□ -1.57
TNRC18-203ENST00000399537 SPRR2AP35326 72 aa5.25□□□□□ -1.57
TNRC18-203ENST00000399537 FAT2Q9NYQ8 4349 aa5.22□□□□□ -1.57
TNRC18-203ENST00000399537 DNAH9Q9NYC9 4486 aa5.2□□□□□ -1.58
TNRC18-203ENST00000399537 MT3P25713 68 aa5.17□□□□□ -1.58
TNRC18-203ENST00000399537 DNAH5Q8TE73 4624 aa5.17□□□□□ -1.58
TNRC18-203ENST00000399537 DYNC2H1Q8NCM8 4307 aaKnown RBP5.15□□□□□ -1.58
TNRC18-203ENST00000399537 VPS13DQ5THJ4 4388 aa5.15□□□□□ -1.59
TNRC18-203ENST00000399537 STARD9Q9P2P6 4700 aa5.13□□□□□ -1.59
TNRC18-203ENST00000399537 DNAH17Q9UFH2 4485 aa5.12□□□□□ -1.59
TNRC18-203ENST00000399537 SPRR2DP22532 72 aa5.1□□□□□ -1.59
TNRC18-203ENST00000399537 PKHD1P08F94 4074 aa5.09□□□□□ -1.59
TNRC18-203ENST00000399537 KRTAP12-4P60329 112 aa5.07□□□□□ -1.6
TNRC18-203ENST00000399537 LRP1Q07954 4544 aaKnown RBP5.07□□□□□ -1.6
TNRC18-203ENST00000399537 MT1GP13640 62 aa5.06□□□□□ -1.6
TNRC18-203ENST00000399537 MT1XP80297 61 aa5.05□□□□□ -1.6
TNRC18-203ENST00000399537 LCE2BO14633 110 aa5.04□□□□□ -1.6
TNRC18-203ENST00000399537 DNAH8Q96JB1 4490 aa5.03□□□□□ -1.6
TNRC18-203ENST00000399537 PLECQ15149 4684 aaKnown RBP5.02□□□□□ -1.61
TNRC18-203ENST00000399537 KRTAP19-8Q3LI54 63 aa5.01□□□□□ -1.61
TNRC18-203ENST00000399537 KRTAP19-1Q8IUB9 90 aa5.01□□□□□ -1.61
TNRC18-203ENST00000399537 SPRR5A0A1B0GTR4 108 aa4.94□□□□□ -1.62
TNRC18-203ENST00000399537 DYNC1H1Q14204 4646 aaKnown RBP4.92□□□□□ -1.62
TNRC18-203ENST00000399537 LCE3DQ9BYE3 92 aa4.88□□□□□ -1.63
TNRC18-203ENST00000399537 RYR1P21817 5038 aa4.83□□□□□ -1.64
TNRC18-203ENST00000399537 MT1BP07438 61 aa4.81□□□□□ -1.64
TNRC18-203ENST00000399537 PKHD1L1Q86WI1 4243 aa4.79□□□□□ -1.64
TNRC18-203ENST00000399537 SACSQ9NZJ4 4579 aa4.79□□□□□ -1.64
TNRC18-203ENST00000399537 LCE3EQ5T5B0 92 aa4.78□□□□□ -1.64
TNRC18-203ENST00000399537 DNHD1Q96M86 4753 aa4.78□□□□□ -1.64
TNRC18-203ENST00000399537 KRTAP17-1Q9BYP8 105 aa4.77□□□□□ -1.65
TNRC18-203ENST00000399537 FAT1Q14517 4588 aa4.75□□□□□ -1.65
TNRC18-203ENST00000399537 LRP1BQ9NZR2 4599 aa4.74□□□□□ -1.65
TNRC18-203ENST00000399537 KRTAP4-8A0A0G2JLE6 195 aa4.73□□□□□ -1.65
TNRC18-203ENST00000399537 KRTAP4-8Q9BYQ9 185 aa4.73□□□□□ -1.65
TNRC18-203ENST00000399537 LCE2CQ5TA81 110 aa4.73□□□□□ -1.65
TNRC18-203ENST00000399537 RYR3Q15413 4870 aa4.71□□□□□ -1.66
TNRC18-203ENST00000399537 KRTAP9-8Q9BYQ0 159 aa4.7□□□□□ -1.66
TNRC18-203ENST00000399537 APOBP04114 4563 aaKnown RBP4.68□□□□□ -1.66
TNRC18-203ENST00000399537 PKD1P98161 4303 aa4.68□□□□□ -1.66
TNRC18-203ENST00000399537 KRTAP9-3Q9BYQ3 159 aa4.67□□□□□ -1.66
TNRC18-203ENST00000399537 KRTAP19-3Q7Z4W3 81 aa4.63□□□□□ -1.67
TNRC18-203ENST00000399537 LCE2DQ5TA82 110 aaPredicted RBP4.63□□□□□ -1.67
TNRC18-203ENST00000399537 MT1LQ93083 61 aa4.62□□□□□ -1.67
TNRC18-203ENST00000399537 PCLOQ9Y6V0 5065 aa4.62□□□□□ -1.67
TNRC18-203ENST00000399537 HSPG2P98160 4391 aa4.61□□□□□ -1.67
TNRC18-203ENST00000399537 MYCBP2O75592 4640 aa4.6□□□□□ -1.67
TNRC18-203ENST00000399537 KRTAP4-7Q9BYR0 210 aa4.57□□□□□ -1.68
TNRC18-203ENST00000399537 MT4P47944 62 aa4.56□□□□□ -1.68
TNRC18-203ENST00000399537 PRM1P04553 51 aa4.53□□□□□ -1.68
TNRC18-203ENST00000399537 MT1EP04732 61 aa4.52□□□□□ -1.69
TNRC18-203ENST00000399537 TNXBP22105 4242 aa4.45□□□□□ -1.7
TNRC18-203ENST00000399537 FAT3Q8TDW7 4589 aa4.44□□□□□ -1.7
TNRC18-203ENST00000399537 MT1MQ8N339 61 aa4.42□□□□□ -1.7
TNRC18-203ENST00000399537 LCE1BQ5T7P3 118 aa4.42□□□□□ -1.7
TNRC18-203ENST00000399537 LCE1DQ5T752 114 aa4.42□□□□□ -1.7
TNRC18-203ENST00000399537 LOC100996750A0A140TA64 210 aa4.39□□□□□ -1.71
TNRC18-203ENST00000399537 KRTAP19-2Q3LHN2 52 aa4.36□□□□□ -1.71
TNRC18-203ENST00000399537 LRP2P98164 4655 aa4.3□□□□□ -1.72
TNRC18-203ENST00000399537 KRTAP4-3Q9BYR4 195 aa4.27□□□□□ -1.73
TNRC18-203ENST00000399537 KMT2CQ8NEZ4 4911 aaKnown RBP4.2□□□□□ -1.74
TNRC18-203ENST00000399537 RYR2Q92736 4967 aa4.2□□□□□ -1.74
TNRC18-203ENST00000399537 HYDINQ4G0P3 5121 aa4.18□□□□□ -1.74
TNRC18-203ENST00000399537 KRTAP2-3P0C7H8 128 aa4.18□□□□□ -1.74
TNRC18-203ENST00000399537 KRTAP2-4Q9BYR9 128 aa4.18□□□□□ -1.74
TNRC18-203ENST00000399537 KRTAP2-1Q9BYU5 128 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms