RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 KRTAP10-8P60410 259 aa8.73□□□□□ -1.01
SIPA1-201ENST00000394224 SACSQ9NZJ4 4579 aa8.72□□□□□ -1.01
SIPA1-201ENST00000394224 ROMO1P60602 79 aa8.69□□□□□ -1.02
SIPA1-201ENST00000394224 P0C880 135 aa8.69□□□□□ -1.02
SIPA1-201ENST00000394224 LPAP08519 4548 aa8.65□□□□□ -1.03
SIPA1-201ENST00000394224 RPL37P61927 97 aaKnown RBP8.63□□□□□ -1.03
SIPA1-201ENST00000394224 S4R3F8 94 aa8.59□□□□□ -1.03
SIPA1-201ENST00000394224 KRTAP10-6P60371 365 aaPredicted RBP8.56□□□□□ -1.04
SIPA1-201ENST00000394224 Q5VSD8 79 aa8.55□□□□□ -1.04
SIPA1-201ENST00000394224 RPS29P62273 56 aaKnown RBP8.54□□□□□ -1.04
SIPA1-201ENST00000394224 TPRXLQ17RH7 258 aa8.54□□□□□ -1.04
SIPA1-201ENST00000394224 PKHD1L1Q86WI1 4243 aa8.54□□□□□ -1.04
SIPA1-201ENST00000394224 KRTAP10-4P60372 401 aaPredicted RBP8.53□□□□□ -1.04
SIPA1-201ENST00000394224 KRTAP3-3Q9BYR6 98 aa8.53□□□□□ -1.04
SIPA1-201ENST00000394224 LRP2P98164 4655 aa8.52□□□□□ -1.05
SIPA1-201ENST00000394224 KIAA1109Q2LD37 5005 aa8.51□□□□□ -1.05
SIPA1-201ENST00000394224 XP32Q5T750 250 aa8.49□□□□□ -1.05
SIPA1-201ENST00000394224 KRTAP12-2P59991 146 aa8.48□□□□□ -1.05
SIPA1-201ENST00000394224 RYR3Q15413 4870 aa8.45□□□□□ -1.06
SIPA1-201ENST00000394224 A0A1B0GVY2 172 aa8.45□□□□□ -1.06
SIPA1-201ENST00000394224 RYR1P21817 5038 aa8.43□□□□□ -1.06
SIPA1-201ENST00000394224 KRTAP3-2Q9BYR7 98 aa8.43□□□□□ -1.06
SIPA1-201ENST00000394224 NDUFAF8A1L188 74 aa8.41□□□□□ -1.06
SIPA1-201ENST00000394224 KRTAP17-1Q9BYP8 105 aa8.35□□□□□ -1.07
SIPA1-201ENST00000394224 RYR2Q92736 4967 aa8.35□□□□□ -1.07
SIPA1-201ENST00000394224 M0QZ58 72 aa8.27□□□□□ -1.09
SIPA1-201ENST00000394224 MUC2Q02817 5179 aa8.26□□□□□ -1.09
SIPA1-201ENST00000394224 TNXBP22105 4242 aa8.25□□□□□ -1.09
SIPA1-201ENST00000394224 KRTAP21-3Q3LHN1 58 aa8.25□□□□□ -1.09
SIPA1-201ENST00000394224 ABCA13Q86UQ4 5058 aa8.25□□□□□ -1.09
SIPA1-201ENST00000394224 KRTAP12-1P59990 96 aa8.24□□□□□ -1.09
SIPA1-201ENST00000394224 EPPK1P58107 5090 aaKnown RBP8.23□□□□□ -1.09
SIPA1-201ENST00000394224 R4GN34 69 aa8.2□□□□□ -1.1
SIPA1-201ENST00000394224 A0A0A0MQY5 61 aa8.08□□□□□ -1.12
SIPA1-201ENST00000394224 LORP23490 312 aaPredicted RBP8.08□□□□□ -1.12
SIPA1-201ENST00000394224 MT1HL1P0DM35 61 aa8.07□□□□□ -1.12
SIPA1-201ENST00000394224 KRTAP4-5Q9BYR2 181 aa8.04□□□□□ -1.12
SIPA1-201ENST00000394224 KRTAP15-1Q3LI76 137 aa7.98□□□□□ -1.13
SIPA1-201ENST00000394224 CAMK2N1Q7Z7J9 78 aa7.95□□□□□ -1.14
SIPA1-201ENST00000394224 J3QL48 77 aa7.87□□□□□ -1.15
SIPA1-201ENST00000394224 KRTAP4-1Q9BYQ7 146 aa7.8□□□□□ -1.16
SIPA1-201ENST00000394224 PLAC4Q8WY50 150 aa7.79□□□□□ -1.16
SIPA1-201ENST00000394224 FAT4Q6V0I7 4981 aa7.76□□□□□ -1.17
SIPA1-201ENST00000394224 HERC2O95714 4834 aa7.72□□□□□ -1.17
SIPA1-201ENST00000394224 SEC61BP60468 96 aaKnown RBP7.69□□□□□ -1.18
SIPA1-201ENST00000394224 HERC1Q15751 4861 aa7.64□□□□□ -1.19
SIPA1-201ENST00000394224 RNF213Q63HN8 5207 aa7.63□□□□□ -1.19
SIPA1-201ENST00000394224 LUZP6Q538Z0 58 aa7.61□□□□□ -1.19
SIPA1-201ENST00000394224 PCLOQ9Y6V0 5065 aa7.55□□□□□ -1.2
SIPA1-201ENST00000394224 MUC17Q685J3 4493 aa7.5□□□□□ -1.21
SIPA1-201ENST00000394224 M0R2T5 61 aa7.48□□□□□ -1.21
SIPA1-201ENST00000394224 BIRC6Q9NR09 4857 aa7.36□□□□□ -1.23
SIPA1-201ENST00000394224 TNP1P09430 55 aa7.35□□□□□ -1.23
SIPA1-201ENST00000394224 HMCN2Q8NDA2 5059 aa7.31□□□□□ -1.24
SIPA1-201ENST00000394224 UBR4Q5T4S7 5183 aa7.3□□□□□ -1.24
SIPA1-201ENST00000394224 KRTAP19-2Q3LHN2 52 aa7.21□□□□□ -1.25
SIPA1-201ENST00000394224 PP632Q6XCG6 107 aa7.21□□□□□ -1.26
SIPA1-201ENST00000394224 FLGP20930 4061 aaPredicted RBP7.16□□□□□ -1.26
SIPA1-201ENST00000394224 KRTAP10-10P60014 251 aa7.11□□□□□ -1.27
SIPA1-201ENST00000394224 LCE3AQ5TA76 89 aa7.04□□□□□ -1.28
SIPA1-201ENST00000394224 USH2AO75445 5202 aa6.99□□□□□ -1.29
SIPA1-201ENST00000394224 KMT2DO14686 5537 aa6.93□□□□□ -1.3
SIPA1-201ENST00000394224 KRTAP19-1Q8IUB9 90 aa6.91□□□□□ -1.3
SIPA1-201ENST00000394224 LCE2CQ5TA81 110 aa6.86□□□□□ -1.31
SIPA1-201ENST00000394224 MT1FP04733 61 aa6.84□□□□□ -1.31
SIPA1-201ENST00000394224 MT1HP80294 61 aa6.78□□□□□ -1.32
SIPA1-201ENST00000394224 FSIP2Q5CZC0 6907 aa6.78□□□□□ -1.32
SIPA1-201ENST00000394224 MT2AP02795 61 aa6.74□□□□□ -1.33
SIPA1-201ENST00000394224 SPRR2GQ9BYE4 73 aa6.74□□□□□ -1.33
SIPA1-201ENST00000394224 SPRR5A0A1B0GTR4 108 aa6.63□□□□□ -1.35
SIPA1-201ENST00000394224 KRTAP12-3P60328 96 aa6.61□□□□□ -1.35
SIPA1-201ENST00000394224 KRTAP10-7P60409 375 aaPredicted RBP6.61□□□□□ -1.35
SIPA1-201ENST00000394224 KRTAP10-12P60413 245 aa6.59□□□□□ -1.35
SIPA1-201ENST00000394224 KRTAP9-8Q9BYQ0 159 aa6.57□□□□□ -1.36
SIPA1-201ENST00000394224 KRTAP10-5P60370 271 aa6.54□□□□□ -1.36
SIPA1-201ENST00000394224 MT1XP80297 61 aa6.53□□□□□ -1.36
SIPA1-201ENST00000394224 KRTAP23-1A1A580 65 aa6.52□□□□□ -1.37
SIPA1-201ENST00000394224 MT1BP07438 61 aa6.5□□□□□ -1.37
SIPA1-201ENST00000394224 KRTAP8-1Q8IUC2 63 aa6.43□□□□□ -1.38
SIPA1-201ENST00000394224 KRTAP4-8A0A0G2JLE6 195 aa6.38□□□□□ -1.39
SIPA1-201ENST00000394224 KRTAP4-8Q9BYQ9 185 aa6.38□□□□□ -1.39
SIPA1-201ENST00000394224 KRTAP19-5Q3LI72 72 aa6.33□□□□□ -1.4
SIPA1-201ENST00000394224 DSTQ03001 7570 aaKnown RBP6.32□□□□□ -1.4
SIPA1-201ENST00000394224 KRTAP19-8Q3LI54 63 aa6.29□□□□□ -1.4
SIPA1-201ENST00000394224 KRTAP4-7Q9BYR0 210 aa6.29□□□□□ -1.4
SIPA1-201ENST00000394224 PRO2289Q9P1D8 64 aa6.27□□□□□ -1.41
SIPA1-201ENST00000394224 OBSCNQ5VST9 7968 aa6.24□□□□□ -1.41
SIPA1-201ENST00000394224 KRTAP9-3Q9BYQ3 159 aa6.24□□□□□ -1.41
SIPA1-201ENST00000394224 LCE2BO14633 110 aa6.17□□□□□ -1.42
SIPA1-201ENST00000394224 FCGBPQ9Y6R7 5405 aaPredicted RBP6.13□□□□□ -1.43
SIPA1-201ENST00000394224 LCE3CQ5T5A8 94 aa6.11□□□□□ -1.43
SIPA1-201ENST00000394224 SYNE1Q8NF91 8797 aaKnown RBP6.08□□□□□ -1.44
SIPA1-201ENST00000394224 INE1O15225 51 aa6.08□□□□□ -1.44
SIPA1-201ENST00000394224 CRCT1Q9UGL9 99 aa6.08□□□□□ -1.44
SIPA1-201ENST00000394224 KRTAP9-6A8MVA2 160 aa6.07□□□□□ -1.44
SIPA1-201ENST00000394224 MUC12Q9UKN1 5478 aa6.02□□□□□ -1.45
SIPA1-201ENST00000394224 LOC100996750A0A140TA64 210 aa5.84□□□□□ -1.48
SIPA1-201ENST00000394224 KRTAP4-3Q9BYR4 195 aa5.83□□□□□ -1.48
SIPA1-201ENST00000394224 SSPOA2VEC9 5147 aa5.82□□□□□ -1.48
SIPA1-201ENST00000394224 KRTAP19-7Q3SYF9 63 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms