RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 Q8N8P6 123 aa3.17□□□□□ -1.9
PTCD3-207ENST00000467273 RPS10P5Q9NQ39 176 aa3.17□□□□□ -1.9
PTCD3-207ENST00000467273 A0A1W2PNN7 141 aa3.16□□□□□ -1.9
PTCD3-207ENST00000467273 hADV29S1A0JD25 119 aa3.16□□□□□ -1.9
PTCD3-207ENST00000467273 C7orf77A4D0Y5 90 aa3.16□□□□□ -1.9
PTCD3-207ENST00000467273 CKS2P33552 79 aa3.16□□□□□ -1.9
PTCD3-207ENST00000467273 DSCR10P59022 87 aa3.16□□□□□ -1.9
PTCD3-207ENST00000467273 SYCNQ0VAF6 134 aa3.16□□□□□ -1.9
PTCD3-207ENST00000467273 ASB16-AS1Q495Z4 193 aa3.16□□□□□ -1.9
PTCD3-207ENST00000467273 C9orf116Q5BN46 136 aaPredicted RBP3.16□□□□□ -1.9
PTCD3-207ENST00000467273 FAM213BQ8TBF2 198 aa3.16□□□□□ -1.9
PTCD3-207ENST00000467273 CLEC2BQ92478 149 aa3.16□□□□□ -1.9
PTCD3-207ENST00000467273 RPP21Q9H633 154 aaKnown RBP3.16□□□□□ -1.9
PTCD3-207ENST00000467273 A0A1B0GVX0 72 aa3.15□□□□□ -1.91
PTCD3-207ENST00000467273 BPY2O14599 106 aa3.15□□□□□ -1.91
PTCD3-207ENST00000467273 NUPR1O60356 82 aa3.15□□□□□ -1.91
PTCD3-207ENST00000467273 APCSP02743 223 aa3.15□□□□□ -1.91
PTCD3-207ENST00000467273 ETDBQ3ZM63 59 aa3.15□□□□□ -1.91
PTCD3-207ENST00000467273 ADM2Q7Z4H4 148 aa3.15□□□□□ -1.91
PTCD3-207ENST00000467273 ARL2-SNX15V9GYD0 113 aa3.15□□□□□ -1.91
PTCD3-207ENST00000467273 IGLV4-69A0A075B6H9 119 aa3.14□□□□□ -1.91
PTCD3-207ENST00000467273 MUC21A0A140T8X8 626 aa3.14□□□□□ -1.91
PTCD3-207ENST00000467273 SYS1-DBNDD2H3BUS1 97 aa3.14□□□□□ -1.91
PTCD3-207ENST00000467273 SH2D1AO60880 128 aa3.14□□□□□ -1.91
PTCD3-207ENST00000467273 ARL14EPLP0DKL9 152 aa3.14□□□□□ -1.91
PTCD3-207ENST00000467273 KRTAP13-3Q3SY46 172 aa3.14□□□□□ -1.91
PTCD3-207ENST00000467273 CHCHD1Q96BP2 118 aaKnown RBP3.14□□□□□ -1.91
PTCD3-207ENST00000467273 SMDT1Q9H4I9 107 aa3.14□□□□□ -1.91
PTCD3-207ENST00000467273 TMEM167BQ9NRX6 74 aa3.14□□□□□ -1.91
PTCD3-207ENST00000467273 V9GYH0 126 aa3.14□□□□□ -1.91
PTCD3-207ENST00000467273 HMSDA8MTL9 139 aa3.13□□□□□ -1.91
PTCD3-207ENST00000467273 A8MWP4 228 aa3.13□□□□□ -1.91
PTCD3-207ENST00000467273 H3BUT2 72 aa3.13□□□□□ -1.91
PTCD3-207ENST00000467273 M0QY20 66 aa3.13□□□□□ -1.91
PTCD3-207ENST00000467273 NPYP01303 97 aa3.13□□□□□ -1.91
PTCD3-207ENST00000467273 CRIP1P50238 77 aa3.13□□□□□ -1.91
PTCD3-207ENST00000467273 PMCHL1Q16048 86 aa3.13□□□□□ -1.91
PTCD3-207ENST00000467273 Q86TA4 180 aa3.13□□□□□ -1.91
PTCD3-207ENST00000467273 C18orf32Q8TCD1 76 aa3.13□□□□□ -1.91
PTCD3-207ENST00000467273 CYTL1Q9NRR1 136 aa3.13□□□□□ -1.91
PTCD3-207ENST00000467273 PRO0461Q9UI25 63 aa3.13□□□□□ -1.91
PTCD3-207ENST00000467273 MUC17Q685J3 4493 aa3.13□□□□□ -1.91
PTCD3-207ENST00000467273 A6NED7 52 aa3.12□□□□□ -1.91
PTCD3-207ENST00000467273 LYRM1O43325 122 aa3.12□□□□□ -1.91
PTCD3-207ENST00000467273 SLC25A20O43772 301 aa3.12□□□□□ -1.91
PTCD3-207ENST00000467273 GCHFRP30047 84 aa3.12□□□□□ -1.91
PTCD3-207ENST00000467273 ZNF345Q14585 488 aa3.12□□□□□ -1.91
PTCD3-207ENST00000467273 SPANXN1Q5VSR9 72 aa3.12□□□□□ -1.91
PTCD3-207ENST00000467273 SMCR5Q8TEV8 140 aa3.12□□□□□ -1.91
PTCD3-207ENST00000467273 C19orf71A6NCJ1 209 aa3.11□□□□□ -1.91
PTCD3-207ENST00000467273 ZNF861PO60384 105 aa3.11□□□□□ -1.91
PTCD3-207ENST00000467273 CCKP06307 115 aa3.11□□□□□ -1.91
PTCD3-207ENST00000467273 TLX1NBP0CAT3 122 aa3.11□□□□□ -1.91
PTCD3-207ENST00000467273 KRTDAPP60985 99 aa3.11□□□□□ -1.91
PTCD3-207ENST00000467273 SERP2Q8N6R1 65 aa3.11□□□□□ -1.91
PTCD3-207ENST00000467273 RETNLBQ9BQ08 111 aa3.11□□□□□ -1.91
PTCD3-207ENST00000467273 TRBV24-1A0A075B6N3 115 aa3.1□□□□□ -1.91
PTCD3-207ENST00000467273 TMSB15BA0A087X1C1 80 aa3.1□□□□□ -1.91
PTCD3-207ENST00000467273 IGKV3OR2-268A0A0C4DH90 116 aa3.1□□□□□ -1.91
PTCD3-207ENST00000467273 LINC00959A0A1B0GUT2 108 aa3.1□□□□□ -1.91
PTCD3-207ENST00000467273 KANTRA0A1W2PQU2 76 aa3.1□□□□□ -1.91
PTCD3-207ENST00000467273 FAM168BA1KXE4 195 aa3.1□□□□□ -1.91
PTCD3-207ENST00000467273 XCL1P47992 114 aa3.1□□□□□ -1.91
PTCD3-207ENST00000467273 UBE2G1P62253 170 aa3.1□□□□□ -1.91
PTCD3-207ENST00000467273 RBM3P98179 157 aaKnown RBP3.1□□□□□ -1.91
PTCD3-207ENST00000467273 CEND1Q8N111 149 aa3.1□□□□□ -1.91
PTCD3-207ENST00000467273 SERF2P84101 59 aa3.09□□□□□ -1.91
PTCD3-207ENST00000467273 Q1T7F1 81 aa3.09□□□□□ -1.91
PTCD3-207ENST00000467273 Q8NDZ9 215 aa3.09□□□□□ -1.91
PTCD3-207ENST00000467273 MRPL35Q9NZE8 188 aaKnown RBP3.09□□□□□ -1.91
PTCD3-207ENST00000467273 TMEM223A0PJW6 202 aa3.08□□□□□ -1.92
PTCD3-207ENST00000467273 MGPP08493 103 aa3.08□□□□□ -1.92
PTCD3-207ENST00000467273 RPL28P46779 137 aaKnown RBP3.08□□□□□ -1.92
PTCD3-207ENST00000467273 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
PTCD3-207ENST00000467273 KRTAP11-1Q8IUC1 163 aa3.08□□□□□ -1.92
PTCD3-207ENST00000467273 LINC00304Q8N9R0 145 aa3.08□□□□□ -1.92
PTCD3-207ENST00000467273 hDV103S1A0JD37 113 aa3.07□□□□□ -1.92
PTCD3-207ENST00000467273 UMAD1C9J7I0 102 aa3.07□□□□□ -1.92
PTCD3-207ENST00000467273 MT1HP80294 61 aa3.07□□□□□ -1.92
PTCD3-207ENST00000467273 FAM229BQ4G0N7 80 aa3.07□□□□□ -1.92
PTCD3-207ENST00000467273 S100A7L2Q5SY68 101 aa3.07□□□□□ -1.92
PTCD3-207ENST00000467273 C2orf91Q6ZV80 131 aa3.07□□□□□ -1.92
PTCD3-207ENST00000467273 NXT2Q9NPJ8 142 aaKnown RBP3.07□□□□□ -1.92
PTCD3-207ENST00000467273 NHP2Q9NX24 153 aaKnown RBP3.07□□□□□ -1.92
PTCD3-207ENST00000467273 F2Z2F3 143 aa3.06□□□□□ -1.92
PTCD3-207ENST00000467273 PPP1R1CQ8WVI7 109 aa3.06□□□□□ -1.92
PTCD3-207ENST00000467273 KRTAP4-1Q9BYQ7 146 aa3.06□□□□□ -1.92
PTCD3-207ENST00000467273 CYSTM1Q9H1C7 97 aa3.06□□□□□ -1.92
PTCD3-207ENST00000467273 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.05□□□□□ -1.92
PTCD3-207ENST00000467273 IGKV2D-26A0A0A0MRZ7 120 aa3.05□□□□□ -1.92
PTCD3-207ENST00000467273 LOC107984156A0A0G2JMH3 177 aa3.05□□□□□ -1.92
PTCD3-207ENST00000467273 IGKV2-29A2NJV5 120 aaPredicted RBP3.05□□□□□ -1.92
PTCD3-207ENST00000467273 NDUFC1O43677 76 aa3.05□□□□□ -1.92
PTCD3-207ENST00000467273 SMIM13P0DJ93 91 aa3.05□□□□□ -1.92
PTCD3-207ENST00000467273 SPAG11BQ08648 103 aa3.05□□□□□ -1.92
PTCD3-207ENST00000467273 SPAG11AQ6PDA7 123 aa3.05□□□□□ -1.92
PTCD3-207ENST00000467273 ARL17AQ8IVW1 177 aa3.05□□□□□ -1.92
PTCD3-207ENST00000467273 FAM19A2Q8N3H0 131 aa3.05□□□□□ -1.92
PTCD3-207ENST00000467273 MIR7-3HGQ8N6C7 128 aa3.05□□□□□ -1.92
PTCD3-207ENST00000467273 C1orf64Q8NEQ6 169 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms