RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 PRLHP81277 87 aa2.92□□□□□ -1.94
PTCD3-219ENST00000494323 HIST2H2BEQ16778 126 aa2.92□□□□□ -1.94
PTCD3-219ENST00000494323 TPRXLQ17RH7 258 aa2.92□□□□□ -1.94
PTCD3-219ENST00000494323 COA6Q5JTJ3 125 aaKnown RBP2.92□□□□□ -1.94
PTCD3-219ENST00000494323 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.92□□□□□ -1.94
PTCD3-219ENST00000494323 HIST1H2BHQ93079 126 aa2.92□□□□□ -1.94
PTCD3-219ENST00000494323 HIST1H2BNQ99877 126 aa2.92□□□□□ -1.94
PTCD3-219ENST00000494323 HIST1H2BMQ99879 126 aa2.92□□□□□ -1.94
PTCD3-219ENST00000494323 CYSLTR1Q9Y271 337 aa2.92□□□□□ -1.94
PTCD3-219ENST00000494323 LOC105371267A0A1B0GV96 52 aa2.91□□□□□ -1.94
PTCD3-219ENST00000494323 HERVK_113P63121 156 aa2.91□□□□□ -1.94
PTCD3-219ENST00000494323 FABP9Q0Z7S8 132 aa2.91□□□□□ -1.94
PTCD3-219ENST00000494323 FAM229BQ4G0N7 80 aa2.91□□□□□ -1.94
PTCD3-219ENST00000494323 FAM19A3Q7Z5A8 133 aa2.91□□□□□ -1.94
PTCD3-219ENST00000494323 KRTAP13-1Q8IUC0 172 aa2.91□□□□□ -1.94
PTCD3-219ENST00000494323 C3orf22Q8N5N4 141 aa2.91□□□□□ -1.94
PTCD3-219ENST00000494323 LINC00337Q8N6G1 96 aa2.91□□□□□ -1.94
PTCD3-219ENST00000494323 Q8N8P6 123 aa2.91□□□□□ -1.94
PTCD3-219ENST00000494323 KRTAP4-1Q9BYQ7 146 aa2.91□□□□□ -1.94
PTCD3-219ENST00000494323 MAP1LC3AQ9H492 121 aa2.91□□□□□ -1.94
PTCD3-219ENST00000494323 CRCT1Q9UGL9 99 aa2.91□□□□□ -1.94
PTCD3-219ENST00000494323 FSIP2Q5CZC0 6907 aa2.91□□□□□ -1.94
PTCD3-219ENST00000494323 TMEM238C9JI98 176 aa2.9□□□□□ -1.95
PTCD3-219ENST00000494323 SMIM6P0DI80 62 aa2.9□□□□□ -1.95
PTCD3-219ENST00000494323 PFN2P35080 140 aa2.9□□□□□ -1.95
PTCD3-219ENST00000494323 NDUFA6P56556 154 aa2.9□□□□□ -1.95
PTCD3-219ENST00000494323 ORMDL2Q53FV1 153 aa2.9□□□□□ -1.95
PTCD3-219ENST00000494323 FAM19A1Q7Z5A9 133 aa2.9□□□□□ -1.95
PTCD3-219ENST00000494323 COX7B2Q8TF08 81 aa2.9□□□□□ -1.95
PTCD3-219ENST00000494323 PLEKHB2Q96CS7 222 aa2.9□□□□□ -1.95
PTCD3-219ENST00000494323 LAMTOR2Q9Y2Q5 125 aa2.9□□□□□ -1.95
PTCD3-219ENST00000494323 SPINK8P0C7L1 97 aa2.89□□□□□ -1.95
PTCD3-219ENST00000494323 CXCL5P42830 114 aa2.89□□□□□ -1.95
PTCD3-219ENST00000494323 AKR1D1P51857 326 aa2.89□□□□□ -1.95
PTCD3-219ENST00000494323 SEC11AP67812 179 aa2.89□□□□□ -1.95
PTCD3-219ENST00000494323 PDZD11Q5EBL8 140 aa2.89□□□□□ -1.95
PTCD3-219ENST00000494323 BAGE3Q86Y29 109 aa2.89□□□□□ -1.95
PTCD3-219ENST00000494323 DAND5Q8N907 189 aa2.89□□□□□ -1.95
PTCD3-219ENST00000494323 CHCHD1Q96BP2 118 aaKnown RBP2.89□□□□□ -1.95
PTCD3-219ENST00000494323 SCGB3A1Q96QR1 104 aa2.89□□□□□ -1.95
PTCD3-219ENST00000494323 MUC17Q685J3 4493 aa2.88□□□□□ -1.95
PTCD3-219ENST00000494323 LINC01549A6NIU2 74 aa2.88□□□□□ -1.95
PTCD3-219ENST00000494323 HSBP1O75506 76 aa2.88□□□□□ -1.95
PTCD3-219ENST00000494323 CAMK2N1Q7Z7J9 78 aa2.88□□□□□ -1.95
PTCD3-219ENST00000494323 HIST3H2BBQ8N257 126 aa2.88□□□□□ -1.95
PTCD3-219ENST00000494323 TOMM6Q96B49 74 aa2.88□□□□□ -1.95
PTCD3-219ENST00000494323 HIGD2AQ9BW72 106 aa2.88□□□□□ -1.95
PTCD3-219ENST00000494323 TMEM126AQ9H061 195 aa2.88□□□□□ -1.95
PTCD3-219ENST00000494323 TINCRA0A1B0GVN0 87 aa2.87□□□□□ -1.95
PTCD3-219ENST00000494323 K7EMI3 77 aa2.87□□□□□ -1.95
PTCD3-219ENST00000494323 M0R378 163 aa2.87□□□□□ -1.95
PTCD3-219ENST00000494323 FABP4P15090 132 aa2.87□□□□□ -1.95
PTCD3-219ENST00000494323 G0S2P27469 103 aa2.87□□□□□ -1.95
PTCD3-219ENST00000494323 KRTAP13-3Q3SY46 172 aa2.87□□□□□ -1.95
PTCD3-219ENST00000494323 ASB16-AS1Q495Z4 193 aa2.87□□□□□ -1.95
PTCD3-219ENST00000494323 Q8NDZ9 215 aa2.87□□□□□ -1.95
PTCD3-219ENST00000494323 C18orf32Q8TCD1 76 aa2.87□□□□□ -1.95
PTCD3-219ENST00000494323 ZNF625Q96I27 306 aaPredicted RBP2.87□□□□□ -1.95
PTCD3-219ENST00000494323 TIMM17AQ99595 171 aa2.87□□□□□ -1.95
PTCD3-219ENST00000494323 CST9LQ9H4G1 147 aa2.87□□□□□ -1.95
PTCD3-219ENST00000494323 SND1-IT1Q9HBX3 110 aa2.87□□□□□ -1.95
PTCD3-219ENST00000494323 NXT2Q9NPJ8 142 aaKnown RBP2.87□□□□□ -1.95
PTCD3-219ENST00000494323 C20orf202A1L168 122 aa2.86□□□□□ -1.95
PTCD3-219ENST00000494323 CTAG1AP78358 180 aa2.86□□□□□ -1.95
PTCD3-219ENST00000494323 S100A12P80511 92 aa2.86□□□□□ -1.95
PTCD3-219ENST00000494323 SPAG11AQ6PDA7 123 aa2.86□□□□□ -1.95
PTCD3-219ENST00000494323 FA2HQ7L5A8 372 aa2.86□□□□□ -1.95
PTCD3-219ENST00000494323 HIST1H2BLQ99880 126 aa2.86□□□□□ -1.95
PTCD3-219ENST00000494323 HSPB8Q9UJY1 196 aa2.86□□□□□ -1.95
PTCD3-219ENST00000494323 LINC00614P0C842 121 aa2.85□□□□□ -1.95
PTCD3-219ENST00000494323 NMUP48645 174 aa2.85□□□□□ -1.95
PTCD3-219ENST00000494323 JOSD1Q15040 202 aaPredicted RBP2.85□□□□□ -1.95
PTCD3-219ENST00000494323 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
PTCD3-219ENST00000494323 FP248Q71RG6 208 aaPredicted RBP2.85□□□□□ -1.95
PTCD3-219ENST00000494323 SPRR4Q96PI1 79 aa2.85□□□□□ -1.95
PTCD3-219ENST00000494323 C12orf57Q99622 126 aa2.85□□□□□ -1.95
PTCD3-219ENST00000494323 ERG28Q9UKR5 140 aa2.85□□□□□ -1.95
PTCD3-219ENST00000494323 TSTD3H0UI37 97 aa2.84□□□□□ -1.95
PTCD3-219ENST00000494323 H3BRM9 83 aa2.84□□□□□ -1.95
PTCD3-219ENST00000494323 LEPROTL1O95214 131 aa2.84□□□□□ -1.95
PTCD3-219ENST00000494323 HBDP02042 147 aa2.84□□□□□ -1.95
PTCD3-219ENST00000494323 PMVKQ15126 192 aa2.84□□□□□ -1.95
PTCD3-219ENST00000494323 PMCHL1Q16048 86 aa2.84□□□□□ -1.95
PTCD3-219ENST00000494323 SMCR5Q8TEV8 140 aa2.84□□□□□ -1.95
PTCD3-219ENST00000494323 LINC01546A6NGU7 62 aa2.83□□□□□ -1.96
PTCD3-219ENST00000494323 SPINK1P00995 79 aa2.83□□□□□ -1.96
PTCD3-219ENST00000494323 LINC00158P58513 81 aa2.83□□□□□ -1.96
PTCD3-219ENST00000494323 COX17Q14061 63 aa2.83□□□□□ -1.96
PTCD3-219ENST00000494323 PYY3Q5JQD4 70 aa2.83□□□□□ -1.96
PTCD3-219ENST00000494323 MAP1LC3CQ9BXW4 147 aa2.83□□□□□ -1.96
PTCD3-219ENST00000494323 HSBP1L1C9JCN9 74 aa2.82□□□□□ -1.96
PTCD3-219ENST00000494323 IGLC3P0DOY3 106 aa2.82□□□□□ -1.96
PTCD3-219ENST00000494323 ZNF22P17026 224 aaPredicted RBP2.82□□□□□ -1.96
PTCD3-219ENST00000494323 KRTDAPP60985 99 aa2.82□□□□□ -1.96
PTCD3-219ENST00000494323 VAMP8Q9BV40 100 aa2.82□□□□□ -1.96
PTCD3-219ENST00000494323 ZNF706Q9Y5V0 76 aaPredicted RBP2.82□□□□□ -1.96
PTCD3-219ENST00000494323 A6NDN8 102 aa2.81□□□□□ -1.96
PTCD3-219ENST00000494323 SYS1-DBNDD2H3BUS1 97 aa2.81□□□□□ -1.96
PTCD3-219ENST00000494323 ERC2-IT1O76042 136 aa2.81□□□□□ -1.96
PTCD3-219ENST00000494323 C3orf79P0CE67 100 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms