RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 DIRC1Q969H9 104 aa11.15□□□□□ -0.62
UBE3D-203ENST00000369747 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.15□□□□□ -0.62
UBE3D-203ENST00000369747 SNCGO76070 127 aa11.15□□□□□ -0.62
UBE3D-203ENST00000369747 ACYP1P07311 99 aa11.15□□□□□ -0.62
UBE3D-203ENST00000369747 C14orf132Q9NPU4 83 aa11.14□□□□□ -0.63
UBE3D-203ENST00000369747 HECTD4Q9Y4D8 3996 aa11.14□□□□□ -0.63
UBE3D-203ENST00000369747 DNAH11Q96DT5 4516 aa11.13□□□□□ -0.63
UBE3D-203ENST00000369747 TMEM256-PLSCR3K7ERE1 68 aa11.13□□□□□ -0.63
UBE3D-203ENST00000369747 SERTAD4-AS1Q5TG53 156 aa11.12□□□□□ -0.63
UBE3D-203ENST00000369747 FUSP35637 526 aaKnown RBP eCLIP11.11□□□□□ -0.63
UBE3D-203ENST00000369747 C14orf177Q52M58 125 aa11.11□□□□□ -0.63
UBE3D-203ENST00000369747 PKD1P98161 4303 aa11.11□□□□□ -0.63
UBE3D-203ENST00000369747 TRBV7-6A0A0J9YX20 115 aa11.11□□□□□ -0.63
UBE3D-203ENST00000369747 ELOF1P60002 83 aaKnown RBP11.11□□□□□ -0.63
UBE3D-203ENST00000369747 GAGE2AQ6NT46 116 aa11.11□□□□□ -0.63
UBE3D-203ENST00000369747 COX7BP24311 80 aa11.1□□□□□ -0.63
UBE3D-203ENST00000369747 PLA2G2DQ9UNK4 145 aa11.09□□□□□ -0.63
UBE3D-203ENST00000369747 A0A1B0GV72 72 aa11.09□□□□□ -0.63
UBE3D-203ENST00000369747 NKAPP1Q8N9T2 125 aa11.09□□□□□ -0.63
UBE3D-203ENST00000369747 SMCR5Q8TEV8 140 aa11.09□□□□□ -0.63
UBE3D-203ENST00000369747 CNBPP62633 177 aaKnown RBP11.08□□□□□ -0.64
UBE3D-203ENST00000369747 SDIM1Q6ZPB5 146 aa11.08□□□□□ -0.64
UBE3D-203ENST00000369747 Q6ZQY7 126 aa11.07□□□□□ -0.64
UBE3D-203ENST00000369747 C7orf33Q8WU49 177 aa11.07□□□□□ -0.64
UBE3D-203ENST00000369747 JMJD7-PLA2G4BH0Y9G9 81 aa11.07□□□□□ -0.64
UBE3D-203ENST00000369747 FAM168BA1KXE4 195 aa11.06□□□□□ -0.64
UBE3D-203ENST00000369747 DNAH5Q8TE73 4624 aa11.05□□□□□ -0.64
UBE3D-203ENST00000369747 IGLV5-37A0A075B6J1 123 aa11.05□□□□□ -0.64
UBE3D-203ENST00000369747 GAGE2BQ13066 116 aa11.05□□□□□ -0.64
UBE3D-203ENST00000369747 KRTAP7-1Q8IUC3 87 aa11.05□□□□□ -0.64
UBE3D-203ENST00000369747 LINC00528Q8N1L1 170 aa11.05□□□□□ -0.64
UBE3D-203ENST00000369747 KCNQ1DNQ9H478 68 aa11.05□□□□□ -0.64
UBE3D-203ENST00000369747 LOC107984640A0A0U1RRK4 108 aa11.04□□□□□ -0.64
UBE3D-203ENST00000369747 KRTAP10-2P60368 255 aa11.03□□□□□ -0.64
UBE3D-203ENST00000369747 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.03□□□□□ -0.64
UBE3D-203ENST00000369747 PKHD1P08F94 4074 aa11.03□□□□□ -0.64
UBE3D-203ENST00000369747 Q6Q795 121 aa11.02□□□□□ -0.65
UBE3D-203ENST00000369747 CCKP06307 115 aa11.01□□□□□ -0.65
UBE3D-203ENST00000369747 C9orf163Q8N9P6 203 aa11.01□□□□□ -0.65
UBE3D-203ENST00000369747 H3BQ85 93 aa11.01□□□□□ -0.65
UBE3D-203ENST00000369747 LINC00336Q6ZUF6 198 aa11.01□□□□□ -0.65
UBE3D-203ENST00000369747 LINC00643Q86TS7 51 aa11.01□□□□□ -0.65
UBE3D-203ENST00000369747 IGLV5-52A0A0A0MRZ9 124 aa10.99□□□□□ -0.65
UBE3D-203ENST00000369747 IGLV1-50A0A075B6I6 118 aa10.99□□□□□ -0.65
UBE3D-203ENST00000369747 TRBV7-7A0A0K0K1E9 115 aa10.99□□□□□ -0.65
UBE3D-203ENST00000369747 LAMTOR3Q9UHA4 124 aa10.99□□□□□ -0.65
UBE3D-203ENST00000369747 RPL37AP8A6NKH3 93 aa10.98□□□□□ -0.65
UBE3D-203ENST00000369747 LINC00846Q9NV44 126 aa10.98□□□□□ -0.65
UBE3D-203ENST00000369747 RBM3P98179 157 aaKnown RBP10.97□□□□□ -0.65
UBE3D-203ENST00000369747 FAM19A5Q7Z5A7 132 aaPredicted RBP10.97□□□□□ -0.65
UBE3D-203ENST00000369747 PRYO14603 147 aa10.96□□□□□ -0.65
UBE3D-203ENST00000369747 KRTAP4-16G5E9R7 235 aaPredicted RBP10.96□□□□□ -0.66
UBE3D-203ENST00000369747 MRPL55Q7Z7F7 128 aaKnown RBP10.96□□□□□ -0.66
UBE3D-203ENST00000369747 A0A096LNI7 61 aa10.95□□□□□ -0.66
UBE3D-203ENST00000369747 Q6ZQT0 140 aa10.95□□□□□ -0.66
UBE3D-203ENST00000369747 LOC110117498A0A087WWA1 95 aa10.94□□□□□ -0.66
UBE3D-203ENST00000369747 A0A1B0GVY2 172 aa10.94□□□□□ -0.66
UBE3D-203ENST00000369747 GHRHP01286 108 aa10.94□□□□□ -0.66
UBE3D-203ENST00000369747 SPRR1AP35321 89 aa10.94□□□□□ -0.66
UBE3D-203ENST00000369747 IGKV2-24A0A0C4DH68 120 aa10.94□□□□□ -0.66
UBE3D-203ENST00000369747 C16orf90A8MZG2 172 aa10.94□□□□□ -0.66
UBE3D-203ENST00000369747 CHTF8P0CG12 524 aa10.93□□□□□ -0.66
UBE3D-203ENST00000369747 B5MCH6 92 aa10.92□□□□□ -0.66
UBE3D-203ENST00000369747 IMUPQ9GZP8 106 aa10.92□□□□□ -0.66
UBE3D-203ENST00000369747 PANO1I0J062 215 aa10.92□□□□□ -0.66
UBE3D-203ENST00000369747 Q6ZRX8 168 aa10.92□□□□□ -0.66
UBE3D-203ENST00000369747 NDUFV3P56181 108 aaKnown RBP10.9□□□□□ -0.66
UBE3D-203ENST00000369747 DSCR8Q96T75 97 aa10.9□□□□□ -0.67
UBE3D-203ENST00000369747 Q9BRP9 147 aa10.9□□□□□ -0.67
UBE3D-203ENST00000369747 ETDCA0A1B0GVM5 59 aa10.89□□□□□ -0.67
UBE3D-203ENST00000369747 A0A1W2PNN7 141 aa10.88□□□□□ -0.67
UBE3D-203ENST00000369747 Q6JHZ5 121 aa10.88□□□□□ -0.67
UBE3D-203ENST00000369747 DHRS4-AS1Q9P1J3 65 aa10.88□□□□□ -0.67
UBE3D-203ENST00000369747 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.88□□□□□ -0.67
UBE3D-203ENST00000369747 TRBV7-4A0A0J9YYF1 115 aa10.88□□□□□ -0.67
UBE3D-203ENST00000369747 LRP1BQ9NZR2 4599 aa10.87□□□□□ -0.67
UBE3D-203ENST00000369747 DYNC1H1Q14204 4646 aaKnown RBP10.87□□□□□ -0.67
UBE3D-203ENST00000369747 PDE6GP18545 87 aa10.86□□□□□ -0.67
UBE3D-203ENST00000369747 KRTAP10-1P60331 282 aa10.86□□□□□ -0.67
UBE3D-203ENST00000369747 ANAPC13Q9BS18 74 aa10.86□□□□□ -0.67
UBE3D-203ENST00000369747 LINC01547P58512 204 aaPredicted RBP10.86□□□□□ -0.67
UBE3D-203ENST00000369747 REG3GQ6UW15 175 aa10.86□□□□□ -0.67
UBE3D-203ENST00000369747 DNAH8Q96JB1 4490 aa10.85□□□□□ -0.67
UBE3D-203ENST00000369747 Q8N377 158 aa10.85□□□□□ -0.67
UBE3D-203ENST00000369747 IGKV3D-7A0A0C4DH55 119 aa10.84□□□□□ -0.67
UBE3D-203ENST00000369747 PKIGQ9Y2B9 76 aa10.84□□□□□ -0.67
UBE3D-203ENST00000369747 SPACA4Q8TDM5 124 aa10.84□□□□□ -0.67
UBE3D-203ENST00000369747 FAM30AQ9NZY2 134 aa10.84□□□□□ -0.67
UBE3D-203ENST00000369747 DEFB105AQ8NG35 78 aa10.83□□□□□ -0.68
UBE3D-203ENST00000369747 DPH3Q96FX2 82 aa10.83□□□□□ -0.68
UBE3D-203ENST00000369747 LINC00474Q9P2X8 69 aa10.82□□□□□ -0.68
UBE3D-203ENST00000369747 EPPK1P58107 5090 aaKnown RBP10.82□□□□□ -0.68
UBE3D-203ENST00000369747 FAM236AA0A1B0GUQ0 79 aa10.82□□□□□ -0.68
UBE3D-203ENST00000369747 FAM236BA0A1B0GV22 79 aa10.82□□□□□ -0.68
UBE3D-203ENST00000369747 ERC2-IT1O76042 136 aa10.8□□□□□ -0.68
UBE3D-203ENST00000369747 ST20-AS1Q8NBB2 130 aa10.8□□□□□ -0.68
UBE3D-203ENST00000369747 UBL5Q9BZL1 73 aa10.8□□□□□ -0.68
UBE3D-203ENST00000369747 IGLV5-48A0A075B6I7 105 aa10.79□□□□□ -0.68
UBE3D-203ENST00000369747 UBE2BP63146 152 aa10.79□□□□□ -0.68
UBE3D-203ENST00000369747 Q6ZSA8 131 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms