RNA–Protein interactions for RNA: ENST00000638175.1

SCARB2-206, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-206ENST00000638175 HSPG2P98160 4391 aa3.97□□□□□ -1.77
SCARB2-206ENST00000638175 LOC107984640A0A0U1RRK4 108 aa3.96□□□□□ -1.78
SCARB2-206ENST00000638175 NUPR1O60356 82 aa3.96□□□□□ -1.78
SCARB2-206ENST00000638175 ZNF22P17026 224 aaPredicted RBP3.96□□□□□ -1.78
SCARB2-206ENST00000638175 CKS1BP61024 79 aa3.96□□□□□ -1.78
SCARB2-206ENST00000638175 SFTA2Q6UW10 78 aa3.96□□□□□ -1.78
SCARB2-206ENST00000638175 Q6ZRU5 148 aa3.96□□□□□ -1.78
SCARB2-206ENST00000638175 TOMM7Q9P0U1 55 aa3.96□□□□□ -1.78
SCARB2-206ENST00000638175 C11orf86A6NJI1 115 aa3.95□□□□□ -1.78
SCARB2-206ENST00000638175 TLX1NBP0CAT3 122 aa3.95□□□□□ -1.78
SCARB2-206ENST00000638175 PLNP26678 52 aa3.95□□□□□ -1.78
SCARB2-206ENST00000638175 XGP55808 180 aa3.95□□□□□ -1.78
SCARB2-206ENST00000638175 C6orf226Q5I0X4 101 aa3.95□□□□□ -1.78
SCARB2-206ENST00000638175 TMEM170BQ5T4T1 132 aa3.95□□□□□ -1.78
SCARB2-206ENST00000638175 SCXQ7RTU7 201 aa3.95□□□□□ -1.78
SCARB2-206ENST00000638175 SPACA4Q8TDM5 124 aa3.95□□□□□ -1.78
SCARB2-206ENST00000638175 MAP1LC3CQ9BXW4 147 aa3.95□□□□□ -1.78
SCARB2-206ENST00000638175 PCLOQ9Y6V0 5065 aa3.95□□□□□ -1.78
SCARB2-206ENST00000638175 A0A096LNI7 61 aa3.94□□□□□ -1.78
SCARB2-206ENST00000638175 H0Y8G0 127 aa3.94□□□□□ -1.78
SCARB2-206ENST00000638175 SPINK8P0C7L1 97 aa3.94□□□□□ -1.78
SCARB2-206ENST00000638175 FABP4P15090 132 aa3.94□□□□□ -1.78
SCARB2-206ENST00000638175 UNQ6190/PRO20217Q6UXQ8 127 aa3.94□□□□□ -1.78
SCARB2-206ENST00000638175 COX7B2Q8TF08 81 aa3.94□□□□□ -1.78
SCARB2-206ENST00000638175 C6orf48Q9UBA6 75 aa3.94□□□□□ -1.78
SCARB2-206ENST00000638175 IGKV2-24A0A0C4DH68 120 aa3.93□□□□□ -1.78
SCARB2-206ENST00000638175 TMEM223A0PJW6 202 aa3.93□□□□□ -1.78
SCARB2-206ENST00000638175 DPM2O94777 84 aa3.93□□□□□ -1.78
SCARB2-206ENST00000638175 S100A6P06703 90 aa3.93□□□□□ -1.78
SCARB2-206ENST00000638175 CHTF8P0CG12 524 aa3.93□□□□□ -1.78
SCARB2-206ENST00000638175 AKR1D1P51857 326 aa3.93□□□□□ -1.78
SCARB2-206ENST00000638175 RPL18AQ02543 176 aaKnown RBP3.93□□□□□ -1.78
SCARB2-206ENST00000638175 C2orf82Q6UX34 121 aa3.93□□□□□ -1.78
SCARB2-206ENST00000638175 CIRBP-AS1Q8TBR5 109 aa3.93□□□□□ -1.78
SCARB2-206ENST00000638175 FAM218AQ96MZ4 157 aa3.93□□□□□ -1.78
SCARB2-206ENST00000638175 PLAC8Q9NZF1 115 aa3.93□□□□□ -1.78
SCARB2-206ENST00000638175 ABCA13Q86UQ4 5058 aa3.93□□□□□ -1.78
SCARB2-206ENST00000638175 NDUFC2-KCTD14E9PQ53 114 aa3.92□□□□□ -1.78
SCARB2-206ENST00000638175 SYS1-DBNDD2H3BUS1 97 aa3.92□□□□□ -1.78
SCARB2-206ENST00000638175 PANO1I0J062 215 aa3.92□□□□□ -1.78
SCARB2-206ENST00000638175 IGKCP01834 107 aa3.92□□□□□ -1.78
SCARB2-206ENST00000638175 HERVK_113P61574 105 aa3.92□□□□□ -1.78
SCARB2-206ENST00000638175 HAMPP81172 84 aa3.92□□□□□ -1.78
SCARB2-206ENST00000638175 MAJINQ3KP22 176 aa3.92□□□□□ -1.78
SCARB2-206ENST00000638175 VPS13BQ7Z7G8 4022 aa3.92□□□□□ -1.78
SCARB2-206ENST00000638175 C20orf202A1L168 122 aa3.91□□□□□ -1.78
SCARB2-206ENST00000638175 EPM2AB3EWF7 344 aa3.91□□□□□ -1.78
SCARB2-206ENST00000638175 S100A2P29034 98 aa3.91□□□□□ -1.78
SCARB2-206ENST00000638175 COX17Q14061 63 aa3.91□□□□□ -1.78
SCARB2-206ENST00000638175 LINC01545Q5VT33 79 aa3.91□□□□□ -1.78
SCARB2-206ENST00000638175 Q6ZRP5 223 aa3.91□□□□□ -1.78
SCARB2-206ENST00000638175 SRRM2Q9UQ35 2752 aaKnown RBP3.91□□□□□ -1.78
SCARB2-206ENST00000638175 C3orf79P0CE67 100 aa3.9□□□□□ -1.79
SCARB2-206ENST00000638175 KRTDAPP60985 99 aa3.9□□□□□ -1.79
SCARB2-206ENST00000638175 Q5VSD8 79 aa3.9□□□□□ -1.79
SCARB2-206ENST00000638175 HIST3H2BBQ8N257 126 aa3.9□□□□□ -1.79
SCARB2-206ENST00000638175 C7orf33Q8WU49 177 aa3.9□□□□□ -1.79
SCARB2-206ENST00000638175 PLEKHB2Q96CS7 222 aa3.9□□□□□ -1.79
SCARB2-206ENST00000638175 DPH3Q96FX2 82 aa3.9□□□□□ -1.79
SCARB2-206ENST00000638175 ZNF625Q96I27 306 aaPredicted RBP3.9□□□□□ -1.79
SCARB2-206ENST00000638175 PMCHL2Q9BQD1 86 aa3.9□□□□□ -1.79
SCARB2-206ENST00000638175 ERG28Q9UKR5 140 aa3.9□□□□□ -1.79
SCARB2-206ENST00000638175 FAT1Q14517 4588 aa3.89□□□□□ -1.79
SCARB2-206ENST00000638175 LINC00587B1AMM8 73 aa3.89□□□□□ -1.79
SCARB2-206ENST00000638175 E9PLD3 99 aa3.89□□□□□ -1.79
SCARB2-206ENST00000638175 LEPROTO15243 131 aa3.89□□□□□ -1.79
SCARB2-206ENST00000638175 SMR3BP02814 79 aaPredicted RBP3.89□□□□□ -1.79
SCARB2-206ENST00000638175 NMUP48645 174 aa3.89□□□□□ -1.79
SCARB2-206ENST00000638175 HERV-K104P63124 156 aa3.89□□□□□ -1.79
SCARB2-206ENST00000638175 C9orf116Q5BN46 136 aaPredicted RBP3.89□□□□□ -1.79
SCARB2-206ENST00000638175 HIST1H2BLQ99880 126 aa3.89□□□□□ -1.79
SCARB2-206ENST00000638175 MYMXA0A1B0GTQ4 84 aa3.88□□□□□ -1.79
SCARB2-206ENST00000638175 J3QQQ9 107 aa3.88□□□□□ -1.79
SCARB2-206ENST00000638175 NDUFA12Q9UI09 145 aa3.88□□□□□ -1.79
SCARB2-206ENST00000638175 FLG2Q5D862 2391 aaPredicted RBP3.88□□□□□ -1.79
SCARB2-206ENST00000638175 LGALS3P17931 250 aaKnown RBP3.87□□□□□ -1.79
SCARB2-206ENST00000638175 PFN2P35080 140 aa3.87□□□□□ -1.79
SCARB2-206ENST00000638175 TSPEAR-AS2P59090 65 aa3.87□□□□□ -1.79
SCARB2-206ENST00000638175 RPL37AP61513 92 aaKnown RBP3.87□□□□□ -1.79
SCARB2-206ENST00000638175 C9orf129Q5T035 196 aaKnown RBP3.87□□□□□ -1.79
SCARB2-206ENST00000638175 FAM19A5Q7Z5A7 132 aaPredicted RBP3.87□□□□□ -1.79
SCARB2-206ENST00000638175 TP73-AS1Q9UF72 201 aa3.87□□□□□ -1.79
SCARB2-206ENST00000638175 A0A1W2PNN7 141 aa3.86□□□□□ -1.79
SCARB2-206ENST00000638175 M0QXV9 152 aa3.86□□□□□ -1.79
SCARB2-206ENST00000638175 MEIG1Q5JSS6 88 aa3.86□□□□□ -1.79
SCARB2-206ENST00000638175 XAGE1AQ9HD64 81 aa3.86□□□□□ -1.79
SCARB2-206ENST00000638175 FAM168BA1KXE4 195 aa3.85□□□□□ -1.79
SCARB2-206ENST00000638175 LINC00158P58513 81 aa3.85□□□□□ -1.79
SCARB2-206ENST00000638175 KRTAP10-4P60372 401 aaPredicted RBP3.85□□□□□ -1.79
SCARB2-206ENST00000638175 PRR3P79522 188 aaKnown RBP3.85□□□□□ -1.79
SCARB2-206ENST00000638175 SND1-IT1Q9HBX3 110 aa3.85□□□□□ -1.79
SCARB2-206ENST00000638175 DMBT1Q9UGM3 2413 aaPredicted RBP3.84□□□□□ -1.79
SCARB2-206ENST00000638175 SMIM13P0DJ93 91 aa3.84□□□□□ -1.79
SCARB2-206ENST00000638175 UBE2BP63146 152 aa3.84□□□□□ -1.79
SCARB2-206ENST00000638175 Q6ZVQ6 151 aa3.84□□□□□ -1.79
SCARB2-206ENST00000638175 PHF5AQ7RTV0 110 aaKnown RBP3.84□□□□□ -1.79
SCARB2-206ENST00000638175 MRPL55Q7Z7F7 128 aaKnown RBP3.84□□□□□ -1.79
SCARB2-206ENST00000638175 NKAPP1Q8N9T2 125 aa3.84□□□□□ -1.79
SCARB2-206ENST00000638175 LOC107984156A0A0G2JMH3 177 aa3.83□□□□□ -1.8
SCARB2-206ENST00000638175 A0A0J9YXY3 114 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms