RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 CDIP1Q9H305 208 aa5.68□□□□□ -1.5
CHD8-214ENST00000557727 PLAC8Q9NZF1 115 aa5.68□□□□□ -1.5
CHD8-214ENST00000557727 VPS13BQ7Z7G8 4022 aa5.68□□□□□ -1.5
CHD8-214ENST00000557727 ABCA13Q86UQ4 5058 aa5.68□□□□□ -1.5
CHD8-214ENST00000557727 A0A1W2PNN7 141 aa5.67□□□□□ -1.5
CHD8-214ENST00000557727 NDUFC2-KCTD14E9PQ53 114 aa5.67□□□□□ -1.5
CHD8-214ENST00000557727 CKS1BP61024 79 aa5.67□□□□□ -1.5
CHD8-214ENST00000557727 C9orf129Q5T035 196 aaKnown RBP5.67□□□□□ -1.5
CHD8-214ENST00000557727 SMR3BP02814 79 aaPredicted RBP5.66□□□□□ -1.5
CHD8-214ENST00000557727 GAGE2BQ13066 116 aa5.66□□□□□ -1.5
CHD8-214ENST00000557727 JOSD1Q15040 202 aaPredicted RBP5.66□□□□□ -1.5
CHD8-214ENST00000557727 MAJINQ3KP22 176 aa5.66□□□□□ -1.5
CHD8-214ENST00000557727 FAM168BA1KXE4 195 aa5.65□□□□□ -1.5
CHD8-214ENST00000557727 HSBP1L1C9JCN9 74 aa5.65□□□□□ -1.5
CHD8-214ENST00000557727 E9PLD3 99 aa5.65□□□□□ -1.5
CHD8-214ENST00000557727 LEPROTO15243 131 aa5.65□□□□□ -1.5
CHD8-214ENST00000557727 RPL18AQ02543 176 aaKnown RBP5.65□□□□□ -1.5
CHD8-214ENST00000557727 STPG4Q8N801 248 aa5.65□□□□□ -1.5
CHD8-214ENST00000557727 PLEKHB2Q96CS7 222 aa5.65□□□□□ -1.5
CHD8-214ENST00000557727 FLG2Q5D862 2391 aaPredicted RBP5.64□□□□□ -1.51
CHD8-214ENST00000557727 IGKV2D-26A0A0A0MRZ7 120 aa5.64□□□□□ -1.51
CHD8-214ENST00000557727 J3QQQ9 107 aa5.64□□□□□ -1.51
CHD8-214ENST00000557727 LGALS3P17931 250 aaKnown RBP5.64□□□□□ -1.51
CHD8-214ENST00000557727 GAGE2EQ4V326 116 aa5.64□□□□□ -1.51
CHD8-214ENST00000557727 SFTA2Q6UW10 78 aa5.64□□□□□ -1.51
CHD8-214ENST00000557727 LINC00474Q9P2X8 69 aa5.64□□□□□ -1.51
CHD8-214ENST00000557727 GAGE2DQ9UEU5 116 aa5.64□□□□□ -1.51
CHD8-214ENST00000557727 PKIGQ9Y2B9 76 aa5.64□□□□□ -1.51
CHD8-214ENST00000557727 NMUP48645 174 aa5.63□□□□□ -1.51
CHD8-214ENST00000557727 PYY3Q5JQD4 70 aa5.63□□□□□ -1.51
CHD8-214ENST00000557727 ERG28Q9UKR5 140 aa5.63□□□□□ -1.51
CHD8-214ENST00000557727 SERTAD4-AS1Q5TG53 156 aa5.62□□□□□ -1.51
CHD8-214ENST00000557727 Q5VSD8 79 aa5.62□□□□□ -1.51
CHD8-214ENST00000557727 KRTAP11-1Q8IUC1 163 aa5.62□□□□□ -1.51
CHD8-214ENST00000557727 Q8NDZ9 215 aa5.62□□□□□ -1.51
CHD8-214ENST00000557727 VAMP8Q9BV40 100 aa5.62□□□□□ -1.51
CHD8-214ENST00000557727 XAGE1AQ9HD64 81 aa5.62□□□□□ -1.51
CHD8-214ENST00000557727 NDUFA12Q9UI09 145 aa5.62□□□□□ -1.51
CHD8-214ENST00000557727 MYMXA0A1B0GTQ4 84 aa5.61□□□□□ -1.51
CHD8-214ENST00000557727 LOC105371267A0A1B0GV96 52 aa5.61□□□□□ -1.51
CHD8-214ENST00000557727 COX17Q14061 63 aa5.61□□□□□ -1.51
CHD8-214ENST00000557727 TTTY13Q9BZ97 58 aa5.61□□□□□ -1.51
CHD8-214ENST00000557727 PCLOQ9Y6V0 5065 aa5.61□□□□□ -1.51
CHD8-214ENST00000557727 SMIM6P0DI80 62 aa5.6□□□□□ -1.51
CHD8-214ENST00000557727 PFN2P35080 140 aa5.6□□□□□ -1.51
CHD8-214ENST00000557727 HERV-K104P63124 156 aa5.6□□□□□ -1.51
CHD8-214ENST00000557727 SND1-IT1Q9HBX3 110 aa5.6□□□□□ -1.51
CHD8-214ENST00000557727 PAM16Q9Y3D7 125 aa5.6□□□□□ -1.51
CHD8-214ENST00000557727 ZNF815PA8K554 130 aa5.59□□□□□ -1.51
CHD8-214ENST00000557727 SMIM13P0DJ93 91 aa5.59□□□□□ -1.51
CHD8-214ENST00000557727 HNRNPA3P51991 378 aaKnown RBP5.59□□□□□ -1.51
CHD8-214ENST00000557727 SPATA45Q537H7 98 aa5.59□□□□□ -1.51
CHD8-214ENST00000557727 MEIG1Q5JSS6 88 aa5.59□□□□□ -1.51
CHD8-214ENST00000557727 PHF5AQ7RTV0 110 aaKnown RBP5.59□□□□□ -1.51
CHD8-214ENST00000557727 FAM19A5Q7Z5A7 132 aaPredicted RBP5.59□□□□□ -1.51
CHD8-214ENST00000557727 LITAFQ99732 161 aa5.59□□□□□ -1.51
CHD8-214ENST00000557727 PKHD1L1Q86WI1 4243 aa5.59□□□□□ -1.52
CHD8-214ENST00000557727 MYCBP2O75592 4640 aa5.58□□□□□ -1.52
CHD8-214ENST00000557727 IGLV5-37A0A075B6J1 123 aa5.58□□□□□ -1.52
CHD8-214ENST00000557727 A0A0J9YXY3 114 aa5.58□□□□□ -1.52
CHD8-214ENST00000557727 S100A12P80511 92 aa5.58□□□□□ -1.52
CHD8-214ENST00000557727 PCP2Q8IVA1 136 aa5.58□□□□□ -1.52
CHD8-214ENST00000557727 DPH3Q96FX2 82 aa5.58□□□□□ -1.52
CHD8-214ENST00000557727 LOC107984156A0A0G2JMH3 177 aa5.57□□□□□ -1.52
CHD8-214ENST00000557727 A0A0U1RRA0 63 aa5.57□□□□□ -1.52
CHD8-214ENST00000557727 LINC00587B1AMM8 73 aa5.57□□□□□ -1.52
CHD8-214ENST00000557727 VPREB1P12018 145 aa5.57□□□□□ -1.52
CHD8-214ENST00000557727 PRR3P79522 188 aaKnown RBP5.57□□□□□ -1.52
CHD8-214ENST00000557727 ADAMTSL4-AS1Q5T5F5 129 aa5.57□□□□□ -1.52
CHD8-214ENST00000557727 SCGB1D4Q6XE38 83 aa5.57□□□□□ -1.52
CHD8-214ENST00000557727 ARL17AQ8IVW1 177 aa5.57□□□□□ -1.52
CHD8-214ENST00000557727 M0QXV9 152 aa5.56□□□□□ -1.52
CHD8-214ENST00000557727 LINC00158P58513 81 aa5.56□□□□□ -1.52
CHD8-214ENST00000557727 RPL37AP61513 92 aaKnown RBP5.56□□□□□ -1.52
CHD8-214ENST00000557727 C21orf62-AS1Q17RA5 79 aa5.56□□□□□ -1.52
CHD8-214ENST00000557727 SOSTDC1Q6X4U4 206 aa5.56□□□□□ -1.52
CHD8-214ENST00000557727 MIR7-3HGQ8N6C7 128 aa5.56□□□□□ -1.52
CHD8-214ENST00000557727 DAND5Q8N907 189 aa5.56□□□□□ -1.52
CHD8-214ENST00000557727 TP73-AS1Q9UF72 201 aa5.56□□□□□ -1.52
CHD8-214ENST00000557727 C22orf24Q9Y442 160 aa5.56□□□□□ -1.52
CHD8-214ENST00000557727 LRP1Q07954 4544 aaKnown RBP5.55□□□□□ -1.52
CHD8-214ENST00000557727 COX8AP10176 69 aa5.55□□□□□ -1.52
CHD8-214ENST00000557727 PSORS1C2Q9UIG4 136 aa5.55□□□□□ -1.52
CHD8-214ENST00000557727 TMEM238C9JI98 176 aa5.54□□□□□ -1.52
CHD8-214ENST00000557727 TIMM17BO60830 172 aa5.54□□□□□ -1.52
CHD8-214ENST00000557727 SLC25A34Q6PIV7 304 aa5.54□□□□□ -1.52
CHD8-214ENST00000557727 MRPL55Q7Z7F7 128 aaKnown RBP5.54□□□□□ -1.52
CHD8-214ENST00000557727 BOD1L2Q8IYS8 172 aa5.54□□□□□ -1.52
CHD8-214ENST00000557727 C7orf33Q8WU49 177 aa5.54□□□□□ -1.52
CHD8-214ENST00000557727 C14orf144Q96I85 54 aa5.54□□□□□ -1.52
CHD8-214ENST00000557727 LINC00167Q96N53 147 aa5.54□□□□□ -1.52
CHD8-214ENST00000557727 DLEU1O43261 78 aa5.53□□□□□ -1.52
CHD8-214ENST00000557727 C12orf57Q99622 126 aa5.53□□□□□ -1.52
CHD8-214ENST00000557727 SRSF9Q13242 221 aaKnown RBP eCLIP5.52□□□□□ -1.53
CHD8-214ENST00000557727 MIEN1Q9BRT3 115 aa5.52□□□□□ -1.53
CHD8-214ENST00000557727 GAGE10A6NGK3 116 aa5.51□□□□□ -1.53
CHD8-214ENST00000557727 KRTAP15-1Q3LI76 137 aa5.51□□□□□ -1.53
CHD8-214ENST00000557727 FAT3Q8TDW7 4589 aa5.51□□□□□ -1.53
CHD8-214ENST00000557727 DMBT1Q9UGM3 2413 aaPredicted RBP5.5□□□□□ -1.53
CHD8-214ENST00000557727 IGLV1-50A0A075B6I6 118 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms