RNA–Protein interactions for RNA: ENST00000454592.5

PHTF2-209, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best)

Gene PHTF2, Length 1,563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-209ENST00000454592 NDUFA6P56556 154 aa4.45□□□□□ -1.7
PHTF2-209ENST00000454592 CHTOPQ9Y3Y2 248 aaKnown RBP4.45□□□□□ -1.7
PHTF2-209ENST00000454592 HIST1H2BKO60814 126 aa4.44□□□□□ -1.7
PHTF2-209ENST00000454592 LEPROTL1O95214 131 aa4.44□□□□□ -1.7
PHTF2-209ENST00000454592 HIST1H2BJP06899 126 aa4.44□□□□□ -1.7
PHTF2-209ENST00000454592 HIST1H2BOP23527 126 aa4.44□□□□□ -1.7
PHTF2-209ENST00000454592 HIST1H2BBP33778 126 aa4.44□□□□□ -1.7
PHTF2-209ENST00000454592 HNRNPA3P51991 378 aaKnown RBP4.44□□□□□ -1.7
PHTF2-209ENST00000454592 HIST1H2BDP58876 126 aa4.44□□□□□ -1.7
PHTF2-209ENST00000454592 HIST1H2BCP62807 126 aa4.44□□□□□ -1.7
PHTF2-209ENST00000454592 PRR3P79522 188 aaKnown RBP4.44□□□□□ -1.7
PHTF2-209ENST00000454592 HIST2H2BEQ16778 126 aa4.44□□□□□ -1.7
PHTF2-209ENST00000454592 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.44□□□□□ -1.7
PHTF2-209ENST00000454592 KRTAP7-1Q8IUC3 87 aa4.44□□□□□ -1.7
PHTF2-209ENST00000454592 HIST1H2BHQ93079 126 aa4.44□□□□□ -1.7
PHTF2-209ENST00000454592 HIST1H2BNQ99877 126 aa4.44□□□□□ -1.7
PHTF2-209ENST00000454592 HIST1H2BMQ99879 126 aa4.44□□□□□ -1.7
PHTF2-209ENST00000454592 KRTAP29-1A8MX34 341 aaPredicted RBP4.44□□□□□ -1.7
PHTF2-209ENST00000454592 C9orf129Q5T035 196 aaKnown RBP4.44□□□□□ -1.7
PHTF2-209ENST00000454592 PKHD1L1Q86WI1 4243 aa4.43□□□□□ -1.7
PHTF2-209ENST00000454592 TMEM223A0PJW6 202 aa4.43□□□□□ -1.7
PHTF2-209ENST00000454592 TMEM170BQ5T4T1 132 aa4.43□□□□□ -1.7
PHTF2-209ENST00000454592 SFTA2Q6UW10 78 aa4.43□□□□□ -1.7
PHTF2-209ENST00000454592 HSPB8Q9UJY1 196 aa4.43□□□□□ -1.7
PHTF2-209ENST00000454592 FAM168BA1KXE4 195 aa4.42□□□□□ -1.7
PHTF2-209ENST00000454592 H0Y8G0 127 aa4.42□□□□□ -1.7
PHTF2-209ENST00000454592 COA6Q5JTJ3 125 aaKnown RBP4.42□□□□□ -1.7
PHTF2-209ENST00000454592 LRP1Q07954 4544 aaKnown RBP4.42□□□□□ -1.7
PHTF2-209ENST00000454592 OXTP01178 125 aa4.41□□□□□ -1.7
PHTF2-209ENST00000454592 S100A1P23297 94 aa4.41□□□□□ -1.7
PHTF2-209ENST00000454592 COX17Q14061 63 aa4.41□□□□□ -1.7
PHTF2-209ENST00000454592 Q75L30 129 aa4.41□□□□□ -1.7
PHTF2-209ENST00000454592 PHF5AQ7RTV0 110 aaKnown RBP4.41□□□□□ -1.7
PHTF2-209ENST00000454592 ZNF625Q96I27 306 aaPredicted RBP4.41□□□□□ -1.7
PHTF2-209ENST00000454592 FAT3Q8TDW7 4589 aa4.41□□□□□ -1.7
PHTF2-209ENST00000454592 SRSF9Q13242 221 aaKnown RBP eCLIP4.4□□□□□ -1.7
PHTF2-209ENST00000454592 FAM19A5Q7Z5A7 132 aaPredicted RBP4.4□□□□□ -1.7
PHTF2-209ENST00000454592 XAGE1AQ9HD64 81 aa4.4□□□□□ -1.7
PHTF2-209ENST00000454592 TP73-AS1Q9UF72 201 aa4.4□□□□□ -1.7
PHTF2-209ENST00000454592 PSORS1C2Q9UIG4 136 aa4.4□□□□□ -1.7
PHTF2-209ENST00000454592 DMBT1Q9UGM3 2413 aaPredicted RBP4.4□□□□□ -1.71
PHTF2-209ENST00000454592 IGLV5-37A0A075B6J1 123 aa4.4□□□□□ -1.71
PHTF2-209ENST00000454592 M0QXV9 152 aa4.4□□□□□ -1.71
PHTF2-209ENST00000454592 FABP4P15090 132 aa4.4□□□□□ -1.71
PHTF2-209ENST00000454592 PLNP26678 52 aa4.4□□□□□ -1.71
PHTF2-209ENST00000454592 KRTAP11-1Q8IUC1 163 aa4.4□□□□□ -1.71
PHTF2-209ENST00000454592 DPM2O94777 84 aa4.39□□□□□ -1.71
PHTF2-209ENST00000454592 HERV-K104P63124 156 aa4.39□□□□□ -1.71
PHTF2-209ENST00000454592 SPINK6Q6UWN8 80 aa4.39□□□□□ -1.71
PHTF2-209ENST00000454592 MAP1LC3CQ9BXW4 147 aa4.39□□□□□ -1.71
PHTF2-209ENST00000454592 ERG28Q9UKR5 140 aa4.39□□□□□ -1.71
PHTF2-209ENST00000454592 C22orf24Q9Y442 160 aa4.39□□□□□ -1.71
PHTF2-209ENST00000454592 SYS1-DBNDD2H3BUS1 97 aa4.37□□□□□ -1.71
PHTF2-209ENST00000454592 LEPROTO15243 131 aa4.37□□□□□ -1.71
PHTF2-209ENST00000454592 IGKCP01834 107 aa4.37□□□□□ -1.71
PHTF2-209ENST00000454592 LINC01545Q5VT33 79 aa4.37□□□□□ -1.71
PHTF2-209ENST00000454592 SND1-IT1Q9HBX3 110 aa4.37□□□□□ -1.71
PHTF2-209ENST00000454592 IGLV7-43P04211 117 aa4.36□□□□□ -1.71
PHTF2-209ENST00000454592 MT1HL1P0DM35 61 aa4.36□□□□□ -1.71
PHTF2-209ENST00000454592 PFN2P35080 140 aa4.36□□□□□ -1.71
PHTF2-209ENST00000454592 TSPEAR-AS2P59090 65 aa4.36□□□□□ -1.71
PHTF2-209ENST00000454592 C1orf137Q5JT78 98 aa4.36□□□□□ -1.71
PHTF2-209ENST00000454592 MRPL55Q7Z7F7 128 aaKnown RBP4.36□□□□□ -1.71
PHTF2-209ENST00000454592 PLEKHB2Q96CS7 222 aa4.36□□□□□ -1.71
PHTF2-209ENST00000454592 PMCHL2Q9BQD1 86 aa4.36□□□□□ -1.71
PHTF2-209ENST00000454592 NDUFA12Q9UI09 145 aa4.36□□□□□ -1.71
PHTF2-209ENST00000454592 MYMXA0A1B0GTQ4 84 aa4.36□□□□□ -1.71
PHTF2-209ENST00000454592 LINC00587B1AMM8 73 aa4.36□□□□□ -1.71
PHTF2-209ENST00000454592 HERVK_113P61574 105 aa4.36□□□□□ -1.71
PHTF2-209ENST00000454592 UBE2BP63146 152 aa4.36□□□□□ -1.71
PHTF2-209ENST00000454592 HERC1Q15751 4861 aa4.35□□□□□ -1.71
PHTF2-209ENST00000454592 E9PLD3 99 aa4.35□□□□□ -1.71
PHTF2-209ENST00000454592 J3QQQ9 107 aa4.35□□□□□ -1.71
PHTF2-209ENST00000454592 C3orf79P0CE67 100 aa4.35□□□□□ -1.71
PHTF2-209ENST00000454592 NMUP48645 174 aa4.35□□□□□ -1.71
PHTF2-209ENST00000454592 LINC01600Q96MT4 127 aa4.35□□□□□ -1.71
PHTF2-209ENST00000454592 LINC00167Q96N53 147 aa4.35□□□□□ -1.71
PHTF2-209ENST00000454592 TNXBP22105 4242 aa4.34□□□□□ -1.71
PHTF2-209ENST00000454592 LOC107984156A0A0G2JMH3 177 aa4.34□□□□□ -1.71
PHTF2-209ENST00000454592 SMIM13P0DJ93 91 aa4.34□□□□□ -1.71
PHTF2-209ENST00000454592 LINC00158P58513 81 aa4.34□□□□□ -1.71
PHTF2-209ENST00000454592 SEC61BP60468 96 aaKnown RBP4.34□□□□□ -1.71
PHTF2-209ENST00000454592 RPL24P83731 157 aaKnown RBP4.34□□□□□ -1.71
PHTF2-209ENST00000454592 REG3GQ6UW15 175 aa4.34□□□□□ -1.71
PHTF2-209ENST00000454592 ARL17AQ8IVW1 177 aa4.34□□□□□ -1.71
PHTF2-209ENST00000454592 Q8NDZ9 215 aa4.34□□□□□ -1.71
PHTF2-209ENST00000454592 MIR7-3HGQ8N6C7 128 aa4.33□□□□□ -1.72
PHTF2-209ENST00000454592 NKAPP1Q8N9T2 125 aa4.33□□□□□ -1.72
PHTF2-209ENST00000454592 DIRC1Q969H9 104 aa4.33□□□□□ -1.72
PHTF2-209ENST00000454592 IGLV1-50A0A075B6I6 118 aa4.32□□□□□ -1.72
PHTF2-209ENST00000454592 H0Y9J4 135 aa4.32□□□□□ -1.72
PHTF2-209ENST00000454592 ZNF861PO60384 105 aa4.32□□□□□ -1.72
PHTF2-209ENST00000454592 BCE1O60756 84 aa4.32□□□□□ -1.72
PHTF2-209ENST00000454592 LGALS3P17931 250 aaKnown RBP4.32□□□□□ -1.72
PHTF2-209ENST00000454592 MEIG1Q5JSS6 88 aa4.32□□□□□ -1.72
PHTF2-209ENST00000454592 RPL37AP8A6NKH3 93 aa4.31□□□□□ -1.72
PHTF2-209ENST00000454592 KRTAP10-8P60410 259 aa4.31□□□□□ -1.72
PHTF2-209ENST00000454592 KRTAP13-1Q8IUC0 172 aa4.31□□□□□ -1.72
PHTF2-209ENST00000454592 HIST3H2BBQ8N257 126 aa4.31□□□□□ -1.72
PHTF2-209ENST00000454592 IGKV2D-26A0A0A0MRZ7 120 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms