RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 C6orf226Q5I0X4 101 aa6.14□□□□□ -1.43
RABGGTA-221ENST00000561055 C10orf25Q5T742 122 aa6.14□□□□□ -1.43
RABGGTA-221ENST00000561055 UNQ6190/PRO20217Q6UXQ8 127 aa6.14□□□□□ -1.43
RABGGTA-221ENST00000561055 SPACA4Q8TDM5 124 aa6.14□□□□□ -1.43
RABGGTA-221ENST00000561055 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.14□□□□□ -1.43
RABGGTA-221ENST00000561055 PANO1I0J062 215 aa6.13□□□□□ -1.43
RABGGTA-221ENST00000561055 PRSS2P07478 247 aa6.13□□□□□ -1.43
RABGGTA-221ENST00000561055 FABP4P15090 132 aa6.13□□□□□ -1.43
RABGGTA-221ENST00000561055 SCXQ7RTU7 201 aa6.13□□□□□ -1.43
RABGGTA-221ENST00000561055 Q8N1X5 172 aa6.13□□□□□ -1.43
RABGGTA-221ENST00000561055 CIRBP-AS1Q8TBR5 109 aa6.13□□□□□ -1.43
RABGGTA-221ENST00000561055 COX7B2Q8TF08 81 aa6.13□□□□□ -1.43
RABGGTA-221ENST00000561055 LINC00474Q9P2X8 69 aa6.13□□□□□ -1.43
RABGGTA-221ENST00000561055 C6orf48Q9UBA6 75 aa6.13□□□□□ -1.43
RABGGTA-221ENST00000561055 A0A096LNI7 61 aa6.12□□□□□ -1.43
RABGGTA-221ENST00000561055 EPM2AB3EWF7 344 aa6.12□□□□□ -1.43
RABGGTA-221ENST00000561055 SPINK8P0C7L1 97 aa6.12□□□□□ -1.43
RABGGTA-221ENST00000561055 CKS1BP61024 79 aa6.12□□□□□ -1.43
RABGGTA-221ENST00000561055 C2orf82Q6UX34 121 aa6.12□□□□□ -1.43
RABGGTA-221ENST00000561055 MAP1LC3CQ9BXW4 147 aa6.12□□□□□ -1.43
RABGGTA-221ENST00000561055 TOMM7Q9P0U1 55 aa6.12□□□□□ -1.43
RABGGTA-221ENST00000561055 A0A087WYN8 130 aa6.11□□□□□ -1.43
RABGGTA-221ENST00000561055 TMEM223A0PJW6 202 aa6.11□□□□□ -1.43
RABGGTA-221ENST00000561055 CHTF8P0CG12 524 aa6.11□□□□□ -1.43
RABGGTA-221ENST00000561055 PTTG1IPP53801 180 aa6.11□□□□□ -1.43
RABGGTA-221ENST00000561055 TMEM170BQ5T4T1 132 aa6.11□□□□□ -1.43
RABGGTA-221ENST00000561055 PLAC8Q9NZF1 115 aa6.11□□□□□ -1.43
RABGGTA-221ENST00000561055 NDUFC2-KCTD14E9PQ53 114 aa6.1□□□□□ -1.43
RABGGTA-221ENST00000561055 SYS1-DBNDD2H3BUS1 97 aa6.1□□□□□ -1.43
RABGGTA-221ENST00000561055 PLNP26678 52 aa6.1□□□□□ -1.43
RABGGTA-221ENST00000561055 SFTA2Q6UW10 78 aa6.1□□□□□ -1.43
RABGGTA-221ENST00000561055 DPM2O94777 84 aa6.09□□□□□ -1.43
RABGGTA-221ENST00000561055 HAMPP81172 84 aa6.09□□□□□ -1.43
RABGGTA-221ENST00000561055 LINC01545Q5VT33 79 aa6.09□□□□□ -1.43
RABGGTA-221ENST00000561055 PET117Q6UWS5 81 aa6.09□□□□□ -1.43
RABGGTA-221ENST00000561055 Q6ZRP5 223 aa6.09□□□□□ -1.43
RABGGTA-221ENST00000561055 IGKV2-24A0A0C4DH68 120 aa6.08□□□□□ -1.44
RABGGTA-221ENST00000561055 H0Y8G0 127 aa6.08□□□□□ -1.44
RABGGTA-221ENST00000561055 C3orf79P0CE67 100 aa6.08□□□□□ -1.44
RABGGTA-221ENST00000561055 GAGE2BQ13066 116 aa6.08□□□□□ -1.44
RABGGTA-221ENST00000561055 MAJINQ3KP22 176 aa6.08□□□□□ -1.44
RABGGTA-221ENST00000561055 STPG4Q8N801 248 aa6.08□□□□□ -1.44
RABGGTA-221ENST00000561055 DPH3Q96FX2 82 aa6.08□□□□□ -1.44
RABGGTA-221ENST00000561055 FAM229AH3BQW9 127 aa6.07□□□□□ -1.44
RABGGTA-221ENST00000561055 IGKCP01834 107 aa6.07□□□□□ -1.44
RABGGTA-221ENST00000561055 SMR3BP02814 79 aaPredicted RBP6.07□□□□□ -1.44
RABGGTA-221ENST00000561055 C9orf116Q5BN46 136 aaPredicted RBP6.07□□□□□ -1.44
RABGGTA-221ENST00000561055 HIST3H2BBQ8N257 126 aa6.07□□□□□ -1.44
RABGGTA-221ENST00000561055 ZNF625Q96I27 306 aaPredicted RBP6.07□□□□□ -1.44
RABGGTA-221ENST00000561055 RPL18AQ02543 176 aaKnown RBP6.06□□□□□ -1.44
RABGGTA-221ENST00000561055 COX17Q14061 63 aa6.06□□□□□ -1.44
RABGGTA-221ENST00000561055 LINC00528Q8N1L1 170 aa6.06□□□□□ -1.44
RABGGTA-221ENST00000561055 PMCHL2Q9BQD1 86 aa6.06□□□□□ -1.44
RABGGTA-221ENST00000561055 KRTAP4-5Q9BYR2 181 aa6.06□□□□□ -1.44
RABGGTA-221ENST00000561055 FAT1Q14517 4588 aa6.05□□□□□ -1.44
RABGGTA-221ENST00000561055 LEPROTO15243 131 aa6.05□□□□□ -1.44
RABGGTA-221ENST00000561055 S100A6P06703 90 aa6.05□□□□□ -1.44
RABGGTA-221ENST00000561055 Q5VSD8 79 aa6.05□□□□□ -1.44
RABGGTA-221ENST00000561055 VPS13BQ7Z7G8 4022 aa6.04□□□□□ -1.44
RABGGTA-221ENST00000561055 A0A1W2PNN7 141 aa6.04□□□□□ -1.44
RABGGTA-221ENST00000561055 C5orf52A6NGY3 159 aa6.04□□□□□ -1.44
RABGGTA-221ENST00000561055 PLA2G1BP04054 148 aaKnown RBP6.04□□□□□ -1.44
RABGGTA-221ENST00000561055 AKR1D1P51857 326 aa6.04□□□□□ -1.44
RABGGTA-221ENST00000561055 KRTAP10-4P60372 401 aaPredicted RBP6.04□□□□□ -1.44
RABGGTA-221ENST00000561055 HERVK_113P61574 105 aa6.04□□□□□ -1.44
RABGGTA-221ENST00000561055 HERV-K104P63124 156 aa6.04□□□□□ -1.44
RABGGTA-221ENST00000561055 GAGE2EQ4V326 116 aa6.04□□□□□ -1.44
RABGGTA-221ENST00000561055 C9orf129Q5T035 196 aaKnown RBP6.04□□□□□ -1.44
RABGGTA-221ENST00000561055 PLEKHB2Q96CS7 222 aa6.04□□□□□ -1.44
RABGGTA-221ENST00000561055 HIST1H2BLQ99880 126 aa6.04□□□□□ -1.44
RABGGTA-221ENST00000561055 GAGE2DQ9UEU5 116 aa6.04□□□□□ -1.44
RABGGTA-221ENST00000561055 E9PLD3 99 aa6.03□□□□□ -1.44
RABGGTA-221ENST00000561055 S100A2P29034 98 aa6.03□□□□□ -1.44
RABGGTA-221ENST00000561055 KRTDAPP60985 99 aa6.03□□□□□ -1.44
RABGGTA-221ENST00000561055 SNRPEP62304 92 aaKnown RBP6.03□□□□□ -1.44
RABGGTA-221ENST00000561055 KRTAP7-1Q8IUC3 87 aa6.03□□□□□ -1.44
RABGGTA-221ENST00000561055 ERG28Q9UKR5 140 aa6.03□□□□□ -1.44
RABGGTA-221ENST00000561055 PLA2G2DQ9UNK4 145 aa6.03□□□□□ -1.44
RABGGTA-221ENST00000561055 MYMXA0A1B0GTQ4 84 aa6.02□□□□□ -1.45
RABGGTA-221ENST00000561055 J3QQQ9 107 aa6.02□□□□□ -1.45
RABGGTA-221ENST00000561055 NMUP48645 174 aa6.02□□□□□ -1.45
RABGGTA-221ENST00000561055 NDUFA12Q9UI09 145 aa6.02□□□□□ -1.45
RABGGTA-221ENST00000561055 SRRM2Q9UQ35 2752 aaKnown RBP6.02□□□□□ -1.45
RABGGTA-221ENST00000561055 FAM168BA1KXE4 195 aa6.01□□□□□ -1.45
RABGGTA-221ENST00000561055 C20orf202A1L168 122 aa6.01□□□□□ -1.45
RABGGTA-221ENST00000561055 LINC00587B1AMM8 73 aa6.01□□□□□ -1.45
RABGGTA-221ENST00000561055 TSPEAR-AS2P59090 65 aa6.01□□□□□ -1.45
RABGGTA-221ENST00000561055 C7orf33Q8WU49 177 aa6.01□□□□□ -1.45
RABGGTA-221ENST00000561055 IGLV5-37A0A075B6J1 123 aa6□□□□□ -1.45
RABGGTA-221ENST00000561055 PFN2P35080 140 aa6□□□□□ -1.45
RABGGTA-221ENST00000561055 RPL37AP61513 92 aaKnown RBP6□□□□□ -1.45
RABGGTA-221ENST00000561055 XAGE1AQ9HD64 81 aa6□□□□□ -1.45
RABGGTA-221ENST00000561055 TP73-AS1Q9UF72 201 aa6□□□□□ -1.45
RABGGTA-221ENST00000561055 SND1-IT1Q9HBX3 110 aa5.99□□□□□ -1.45
RABGGTA-221ENST00000561055 LOC107984156A0A0G2JMH3 177 aa5.98□□□□□ -1.45
RABGGTA-221ENST00000561055 LGALS3P17931 250 aaKnown RBP5.98□□□□□ -1.45
RABGGTA-221ENST00000561055 LINC00158P58513 81 aa5.98□□□□□ -1.45
RABGGTA-221ENST00000561055 SERTAD4-AS1Q5TG53 156 aa5.98□□□□□ -1.45
RABGGTA-221ENST00000561055 PHF5AQ7RTV0 110 aaKnown RBP5.98□□□□□ -1.45
RABGGTA-221ENST00000561055 FAM19A5Q7Z5A7 132 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms