RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 COX17Q14061 63 aa6.58□□□□□ -1.36
TRAFD1-208ENST00000552890 KIAA0087Q14695 138 aa6.58□□□□□ -1.36
TRAFD1-208ENST00000552890 MAJINQ3KP22 176 aa6.58□□□□□ -1.36
TRAFD1-208ENST00000552890 COA6Q5JTJ3 125 aaKnown RBP6.58□□□□□ -1.36
TRAFD1-208ENST00000552890 ZC2HC1BQ5TFG8 222 aa6.58□□□□□ -1.36
TRAFD1-208ENST00000552890 SCXQ7RTU7 201 aa6.58□□□□□ -1.36
TRAFD1-208ENST00000552890 FAM19A2Q8N3H0 131 aa6.58□□□□□ -1.36
TRAFD1-208ENST00000552890 CIRBP-AS1Q8TBR5 109 aa6.58□□□□□ -1.36
TRAFD1-208ENST00000552890 PLAC8Q9NZF1 115 aa6.58□□□□□ -1.36
TRAFD1-208ENST00000552890 IGLV5-39A0A0G2JS06 123 aa6.57□□□□□ -1.36
TRAFD1-208ENST00000552890 LCE2BO14633 110 aa6.57□□□□□ -1.36
TRAFD1-208ENST00000552890 GAGE2BQ13066 116 aa6.57□□□□□ -1.36
TRAFD1-208ENST00000552890 LINC01620Q4KN68 170 aa6.57□□□□□ -1.36
TRAFD1-208ENST00000552890 FAM30AQ9NZY2 134 aa6.57□□□□□ -1.36
TRAFD1-208ENST00000552890 IGKV2-24A0A0C4DH68 120 aa6.56□□□□□ -1.36
TRAFD1-208ENST00000552890 C20orf202A1L168 122 aa6.56□□□□□ -1.36
TRAFD1-208ENST00000552890 C11orf86A6NJI1 115 aa6.56□□□□□ -1.36
TRAFD1-208ENST00000552890 DPM2O94777 84 aa6.56□□□□□ -1.36
TRAFD1-208ENST00000552890 ZNF22P17026 224 aaPredicted RBP6.56□□□□□ -1.36
TRAFD1-208ENST00000552890 UNQ6190/PRO20217Q6UXQ8 127 aa6.56□□□□□ -1.36
TRAFD1-208ENST00000552890 STPG4Q8N801 248 aa6.56□□□□□ -1.36
TRAFD1-208ENST00000552890 LINC00526Q96FQ7 95 aa6.56□□□□□ -1.36
TRAFD1-208ENST00000552890 A0A087WYN8 130 aa6.55□□□□□ -1.36
TRAFD1-208ENST00000552890 S100A6P06703 90 aa6.55□□□□□ -1.36
TRAFD1-208ENST00000552890 SPINK8P0C7L1 97 aa6.55□□□□□ -1.36
TRAFD1-208ENST00000552890 FABP4P15090 132 aa6.55□□□□□ -1.36
TRAFD1-208ENST00000552890 HERV-K104P63124 156 aa6.55□□□□□ -1.36
TRAFD1-208ENST00000552890 LINC00528Q8N1L1 170 aa6.55□□□□□ -1.36
TRAFD1-208ENST00000552890 A0A096LNI7 61 aa6.54□□□□□ -1.36
TRAFD1-208ENST00000552890 NMUP48645 174 aa6.54□□□□□ -1.36
TRAFD1-208ENST00000552890 Q5VSD8 79 aa6.54□□□□□ -1.36
TRAFD1-208ENST00000552890 PET117Q6UWS5 81 aa6.54□□□□□ -1.36
TRAFD1-208ENST00000552890 PLEKHB2Q96CS7 222 aa6.54□□□□□ -1.36
TRAFD1-208ENST00000552890 C6orf48Q9UBA6 75 aa6.54□□□□□ -1.36
TRAFD1-208ENST00000552890 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.54□□□□□ -1.36
TRAFD1-208ENST00000552890 BIRC6Q9NR09 4857 aa6.53□□□□□ -1.36
TRAFD1-208ENST00000552890 H0Y8G0 127 aa6.53□□□□□ -1.36
TRAFD1-208ENST00000552890 IGKCP01834 107 aa6.53□□□□□ -1.36
TRAFD1-208ENST00000552890 S100A2P29034 98 aa6.53□□□□□ -1.36
TRAFD1-208ENST00000552890 LBHQ53QV2 105 aaPredicted RBP6.53□□□□□ -1.36
TRAFD1-208ENST00000552890 C2orf82Q6UX34 121 aa6.53□□□□□ -1.36
TRAFD1-208ENST00000552890 MYMXA0A1B0GTQ4 84 aa6.52□□□□□ -1.37
TRAFD1-208ENST00000552890 TMEM223A0PJW6 202 aa6.52□□□□□ -1.37
TRAFD1-208ENST00000552890 SYS1-DBNDD2H3BUS1 97 aa6.52□□□□□ -1.37
TRAFD1-208ENST00000552890 SMR3BP02814 79 aaPredicted RBP6.52□□□□□ -1.37
TRAFD1-208ENST00000552890 LINC00310P59036 64 aa6.52□□□□□ -1.37
TRAFD1-208ENST00000552890 RPL37AP61513 92 aaKnown RBP6.52□□□□□ -1.37
TRAFD1-208ENST00000552890 LRP1BQ9NZR2 4599 aa6.52□□□□□ -1.37
TRAFD1-208ENST00000552890 DNAH5Q8TE73 4624 aa6.51□□□□□ -1.37
TRAFD1-208ENST00000552890 GAGE2EQ4V326 116 aa6.51□□□□□ -1.37
TRAFD1-208ENST00000552890 C10orf25Q5T742 122 aa6.51□□□□□ -1.37
TRAFD1-208ENST00000552890 Q6ZRP5 223 aa6.51□□□□□ -1.37
TRAFD1-208ENST00000552890 GAGE2DQ9UEU5 116 aa6.51□□□□□ -1.37
TRAFD1-208ENST00000552890 CHTF8P0CG12 524 aa6.5□□□□□ -1.37
TRAFD1-208ENST00000552890 SNRPEP62304 92 aaKnown RBP6.5□□□□□ -1.37
TRAFD1-208ENST00000552890 RPL24P83731 157 aaKnown RBP6.5□□□□□ -1.37
TRAFD1-208ENST00000552890 C9orf116Q5BN46 136 aaPredicted RBP6.5□□□□□ -1.37
TRAFD1-208ENST00000552890 TP73-AS1Q9UF72 201 aa6.5□□□□□ -1.37
TRAFD1-208ENST00000552890 LEPROTO15243 131 aa6.49□□□□□ -1.37
TRAFD1-208ENST00000552890 NUPR1O60356 82 aa6.49□□□□□ -1.37
TRAFD1-208ENST00000552890 LGALS3P17931 250 aaKnown RBP6.49□□□□□ -1.37
TRAFD1-208ENST00000552890 ERG28Q9UKR5 140 aa6.49□□□□□ -1.37
TRAFD1-208ENST00000552890 PLA2G2DQ9UNK4 145 aa6.49□□□□□ -1.37
TRAFD1-208ENST00000552890 DYNC1H1Q14204 4646 aaKnown RBP6.49□□□□□ -1.37
TRAFD1-208ENST00000552890 INAFM2P0DMQ5 153 aa6.48□□□□□ -1.37
TRAFD1-208ENST00000552890 LINC01545Q5VT33 79 aa6.48□□□□□ -1.37
TRAFD1-208ENST00000552890 NDUFA12Q9UI09 145 aa6.48□□□□□ -1.37
TRAFD1-208ENST00000552890 PANO1I0J062 215 aa6.47□□□□□ -1.37
TRAFD1-208ENST00000552890 J3QQQ9 107 aa6.47□□□□□ -1.37
TRAFD1-208ENST00000552890 KRTDAPP60985 99 aa6.47□□□□□ -1.37
TRAFD1-208ENST00000552890 S100A12P80511 92 aa6.47□□□□□ -1.37
TRAFD1-208ENST00000552890 NKAPP1Q8N9T2 125 aa6.47□□□□□ -1.37
TRAFD1-208ENST00000552890 COPS9Q8WXC6 57 aa6.47□□□□□ -1.37
TRAFD1-208ENST00000552890 ZNF625Q96I27 306 aaPredicted RBP6.47□□□□□ -1.37
TRAFD1-208ENST00000552890 E9PLD3 99 aa6.46□□□□□ -1.38
TRAFD1-208ENST00000552890 PFN2P35080 140 aa6.46□□□□□ -1.38
TRAFD1-208ENST00000552890 LINC00158P58513 81 aa6.46□□□□□ -1.38
TRAFD1-208ENST00000552890 UBE2BP63146 152 aa6.46□□□□□ -1.38
TRAFD1-208ENST00000552890 HAMPP81172 84 aa6.46□□□□□ -1.38
TRAFD1-208ENST00000552890 MEIG1Q5JSS6 88 aa6.46□□□□□ -1.38
TRAFD1-208ENST00000552890 HSBP1L1C9JCN9 74 aa6.45□□□□□ -1.38
TRAFD1-208ENST00000552890 M0QXV9 152 aa6.45□□□□□ -1.38
TRAFD1-208ENST00000552890 C3orf79P0CE67 100 aa6.45□□□□□ -1.38
TRAFD1-208ENST00000552890 MIEN1Q9BRT3 115 aa6.45□□□□□ -1.38
TRAFD1-208ENST00000552890 CBY1Q9Y3M2 126 aa6.45□□□□□ -1.38
TRAFD1-208ENST00000552890 SRRM2Q9UQ35 2752 aaKnown RBP6.44□□□□□ -1.38
TRAFD1-208ENST00000552890 A0A1W2PNN7 141 aa6.44□□□□□ -1.38
TRAFD1-208ENST00000552890 FAM19A5Q7Z5A7 132 aaPredicted RBP6.44□□□□□ -1.38
TRAFD1-208ENST00000552890 KIAA1109Q2LD37 5005 aa6.44□□□□□ -1.38
TRAFD1-208ENST00000552890 IGLV5-37A0A075B6J1 123 aa6.43□□□□□ -1.38
TRAFD1-208ENST00000552890 PRR3P79522 188 aaKnown RBP6.43□□□□□ -1.38
TRAFD1-208ENST00000552890 C9orf129Q5T035 196 aaKnown RBP6.43□□□□□ -1.38
TRAFD1-208ENST00000552890 MRPL55Q7Z7F7 128 aaKnown RBP6.43□□□□□ -1.38
TRAFD1-208ENST00000552890 XAGE1AQ9HD64 81 aa6.43□□□□□ -1.38
TRAFD1-208ENST00000552890 IGKV2D-26A0A0A0MRZ7 120 aa6.42□□□□□ -1.38
TRAFD1-208ENST00000552890 OXTP01178 125 aa6.42□□□□□ -1.38
TRAFD1-208ENST00000552890 REG3GQ6UW15 175 aa6.42□□□□□ -1.38
TRAFD1-208ENST00000552890 SPINK6Q6UWN8 80 aa6.42□□□□□ -1.38
TRAFD1-208ENST00000552890 HIST3H2BBQ8N257 126 aa6.42□□□□□ -1.38
TRAFD1-208ENST00000552890 SND1-IT1Q9HBX3 110 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms