RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 UNQ6190/PRO20217Q6UXQ8 127 aa11.14□□□□□ -0.63
ERCC3-207ENST00000490062 C6orf48Q9UBA6 75 aa11.14□□□□□ -0.63
ERCC3-207ENST00000490062 LOC107984640A0A0U1RRK4 108 aa11.13□□□□□ -0.63
ERCC3-207ENST00000490062 SPINK8P0C7L1 97 aa11.13□□□□□ -0.63
ERCC3-207ENST00000490062 SPACA4Q8TDM5 124 aa11.13□□□□□ -0.63
ERCC3-207ENST00000490062 COX7B2Q8TF08 81 aa11.13□□□□□ -0.63
ERCC3-207ENST00000490062 LINC00474Q9P2X8 69 aa11.13□□□□□ -0.63
ERCC3-207ENST00000490062 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.13□□□□□ -0.63
ERCC3-207ENST00000490062 TMEM223A0PJW6 202 aa11.12□□□□□ -0.63
ERCC3-207ENST00000490062 PLNP26678 52 aa11.12□□□□□ -0.63
ERCC3-207ENST00000490062 TMEM170BQ5T4T1 132 aa11.12□□□□□ -0.63
ERCC3-207ENST00000490062 C2orf82Q6UX34 121 aa11.12□□□□□ -0.63
ERCC3-207ENST00000490062 TOMM7Q9P0U1 55 aa11.12□□□□□ -0.63
ERCC3-207ENST00000490062 SYS1-DBNDD2H3BUS1 97 aa11.11□□□□□ -0.63
ERCC3-207ENST00000490062 PANO1I0J062 215 aa11.11□□□□□ -0.63
ERCC3-207ENST00000490062 CKS1BP61024 79 aa11.11□□□□□ -0.63
ERCC3-207ENST00000490062 SCXQ7RTU7 201 aa11.11□□□□□ -0.63
ERCC3-207ENST00000490062 A0A096LNI7 61 aa11.1□□□□□ -0.63
ERCC3-207ENST00000490062 PTTG1IPP53801 180 aa11.1□□□□□ -0.63
ERCC3-207ENST00000490062 PET117Q6UWS5 81 aa11.1□□□□□ -0.63
ERCC3-207ENST00000490062 CIRBP-AS1Q8TBR5 109 aa11.1□□□□□ -0.63
ERCC3-207ENST00000490062 EPM2AB3EWF7 344 aa11.09□□□□□ -0.63
ERCC3-207ENST00000490062 DPM2O94777 84 aa11.09□□□□□ -0.63
ERCC3-207ENST00000490062 LINC01545Q5VT33 79 aa11.09□□□□□ -0.63
ERCC3-207ENST00000490062 SFTA2Q6UW10 78 aa11.09□□□□□ -0.63
ERCC3-207ENST00000490062 H0Y8G0 127 aa11.08□□□□□ -0.64
ERCC3-207ENST00000490062 HIST3H2BBQ8N257 126 aa11.08□□□□□ -0.64
ERCC3-207ENST00000490062 PLAC8Q9NZF1 115 aa11.08□□□□□ -0.64
ERCC3-207ENST00000490062 NDUFC2-KCTD14E9PQ53 114 aa11.07□□□□□ -0.64
ERCC3-207ENST00000490062 IGKCP01834 107 aa11.07□□□□□ -0.64
ERCC3-207ENST00000490062 C3orf79P0CE67 100 aa11.07□□□□□ -0.64
ERCC3-207ENST00000490062 CHTF8P0CG12 524 aa11.07□□□□□ -0.64
ERCC3-207ENST00000490062 Q8N1X5 172 aa11.07□□□□□ -0.64
ERCC3-207ENST00000490062 FAT1Q14517 4588 aa11.07□□□□□ -0.64
ERCC3-207ENST00000490062 A0A087WYN8 130 aa11.05□□□□□ -0.64
ERCC3-207ENST00000490062 S100A6P06703 90 aa11.05□□□□□ -0.64
ERCC3-207ENST00000490062 Q6ZRP5 223 aa11.05□□□□□ -0.64
ERCC3-207ENST00000490062 IGKV2-24A0A0C4DH68 120 aa11.04□□□□□ -0.64
ERCC3-207ENST00000490062 HAMPP81172 84 aa11.04□□□□□ -0.64
ERCC3-207ENST00000490062 ZNF625Q96I27 306 aaPredicted RBP11.04□□□□□ -0.64
ERCC3-207ENST00000490062 HIST1H2BLQ99880 126 aa11.04□□□□□ -0.64
ERCC3-207ENST00000490062 RPL18AQ02543 176 aaKnown RBP11.03□□□□□ -0.64
ERCC3-207ENST00000490062 GAGE2BQ13066 116 aa11.03□□□□□ -0.64
ERCC3-207ENST00000490062 MAJINQ3KP22 176 aa11.03□□□□□ -0.64
ERCC3-207ENST00000490062 C9orf116Q5BN46 136 aaPredicted RBP11.03□□□□□ -0.64
ERCC3-207ENST00000490062 PMCHL2Q9BQD1 86 aa11.03□□□□□ -0.64
ERCC3-207ENST00000490062 KRTAP17-1Q9BYP8 105 aa11.03□□□□□ -0.64
ERCC3-207ENST00000490062 C5orf52A6NGY3 159 aa11.02□□□□□ -0.65
ERCC3-207ENST00000490062 AKR1D1P51857 326 aa11.02□□□□□ -0.65
ERCC3-207ENST00000490062 HERVK_113P61574 105 aa11.01□□□□□ -0.65
ERCC3-207ENST00000490062 STPG4Q8N801 248 aa11.01□□□□□ -0.65
ERCC3-207ENST00000490062 LEPROTO15243 131 aa11□□□□□ -0.65
ERCC3-207ENST00000490062 S100A2P29034 98 aa11□□□□□ -0.65
ERCC3-207ENST00000490062 KRTDAPP60985 99 aa11□□□□□ -0.65
ERCC3-207ENST00000490062 COX17Q14061 63 aa11□□□□□ -0.65
ERCC3-207ENST00000490062 PLEKHB2Q96CS7 222 aa11□□□□□ -0.65
ERCC3-207ENST00000490062 C20orf202A1L168 122 aa10.99□□□□□ -0.65
ERCC3-207ENST00000490062 SNRPEP62304 92 aaKnown RBP10.99□□□□□ -0.65
ERCC3-207ENST00000490062 E9PLD3 99 aa10.98□□□□□ -0.65
ERCC3-207ENST00000490062 HERV-K104P63124 156 aa10.98□□□□□ -0.65
ERCC3-207ENST00000490062 DPH3Q96FX2 82 aa10.98□□□□□ -0.65
ERCC3-207ENST00000490062 A0A1W2PNN7 141 aa10.97□□□□□ -0.65
ERCC3-207ENST00000490062 SMR3BP02814 79 aaPredicted RBP10.97□□□□□ -0.65
ERCC3-207ENST00000490062 C9orf129Q5T035 196 aaKnown RBP10.97□□□□□ -0.65
ERCC3-207ENST00000490062 LINC00528Q8N1L1 170 aa10.97□□□□□ -0.65
ERCC3-207ENST00000490062 ERG28Q9UKR5 140 aa10.97□□□□□ -0.65
ERCC3-207ENST00000490062 FAM229AH3BQW9 127 aa10.96□□□□□ -0.65
ERCC3-207ENST00000490062 J3QQQ9 107 aa10.96□□□□□ -0.65
ERCC3-207ENST00000490062 NMUP48645 174 aa10.96□□□□□ -0.65
ERCC3-207ENST00000490062 TSPEAR-AS2P59090 65 aa10.96□□□□□ -0.65
ERCC3-207ENST00000490062 GAGE2EQ4V326 116 aa10.96□□□□□ -0.65
ERCC3-207ENST00000490062 GAGE2DQ9UEU5 116 aa10.96□□□□□ -0.65
ERCC3-207ENST00000490062 NDUFA12Q9UI09 145 aa10.96□□□□□ -0.65
ERCC3-207ENST00000490062 VPS13BQ7Z7G8 4022 aa10.94□□□□□ -0.66
ERCC3-207ENST00000490062 MYMXA0A1B0GTQ4 84 aa10.94□□□□□ -0.66
ERCC3-207ENST00000490062 LINC00587B1AMM8 73 aa10.94□□□□□ -0.66
ERCC3-207ENST00000490062 Q5VSD8 79 aa10.94□□□□□ -0.66
ERCC3-207ENST00000490062 PLA2G2DQ9UNK4 145 aa10.94□□□□□ -0.66
ERCC3-207ENST00000490062 KRTAP10-4P60372 401 aaPredicted RBP10.93□□□□□ -0.66
ERCC3-207ENST00000490062 KRTAP7-1Q8IUC3 87 aa10.93□□□□□ -0.66
ERCC3-207ENST00000490062 PLA2G1BP04054 148 aaKnown RBP10.92□□□□□ -0.66
ERCC3-207ENST00000490062 LGALS3P17931 250 aaKnown RBP10.91□□□□□ -0.66
ERCC3-207ENST00000490062 KRTAP4-5Q9BYR2 181 aa10.91□□□□□ -0.66
ERCC3-207ENST00000490062 PFN2P35080 140 aa10.9□□□□□ -0.66
ERCC3-207ENST00000490062 C7orf33Q8WU49 177 aa10.9□□□□□ -0.66
ERCC3-207ENST00000490062 XAGE1AQ9HD64 81 aa10.9□□□□□ -0.66
ERCC3-207ENST00000490062 ABCA13Q86UQ4 5058 aa10.9□□□□□ -0.66
ERCC3-207ENST00000490062 FAM168BA1KXE4 195 aa10.89□□□□□ -0.67
ERCC3-207ENST00000490062 TP73-AS1Q9UF72 201 aa10.89□□□□□ -0.67
ERCC3-207ENST00000490062 IGLV5-37A0A075B6J1 123 aa10.88□□□□□ -0.67
ERCC3-207ENST00000490062 SND1-IT1Q9HBX3 110 aa10.88□□□□□ -0.67
ERCC3-207ENST00000490062 SERTAD4-AS1Q5TG53 156 aa10.87□□□□□ -0.67
ERCC3-207ENST00000490062 IGKV2D-26A0A0A0MRZ7 120 aa10.86□□□□□ -0.67
ERCC3-207ENST00000490062 LINC00158P58513 81 aa10.86□□□□□ -0.67
ERCC3-207ENST00000490062 RPL37AP61513 92 aaKnown RBP10.86□□□□□ -0.67
ERCC3-207ENST00000490062 MEIG1Q5JSS6 88 aa10.86□□□□□ -0.67
ERCC3-207ENST00000490062 FAM19A5Q7Z5A7 132 aaPredicted RBP10.86□□□□□ -0.67
ERCC3-207ENST00000490062 LOC107984156A0A0G2JMH3 177 aa10.85□□□□□ -0.67
ERCC3-207ENST00000490062 M0QXV9 152 aa10.85□□□□□ -0.67
ERCC3-207ENST00000490062 SMIM13P0DJ93 91 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 231.2 ms