RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 KRTAP10-9P60411 292 aa9.06□□□□□ -0.96
MSH6-213ENST00000614496 CMC4P56277 68 aaPredicted RBP9.06□□□□□ -0.96
MSH6-213ENST00000614496 TRBV10-1A0A0K0K1A3 114 aa9.05□□□□□ -0.96
MSH6-213ENST00000614496 ODF3L2Q3SX64 289 aa9.05□□□□□ -0.96
MSH6-213ENST00000614496 GYPEP15421 78 aa9.05□□□□□ -0.96
MSH6-213ENST00000614496 C14orf132Q9NPU4 83 aa9.05□□□□□ -0.96
MSH6-213ENST00000614496 DEFB4AO15263 64 aa9.04□□□□□ -0.96
MSH6-213ENST00000614496 C16orf74Q96GX8 76 aa9.04□□□□□ -0.96
MSH6-213ENST00000614496 OVOL2Q9BRP0 275 aa9.04□□□□□ -0.96
MSH6-213ENST00000614496 DNAJC9-AS1A6NH13 148 aa9.04□□□□□ -0.96
MSH6-213ENST00000614496 SLPIP03973 132 aa9.04□□□□□ -0.96
MSH6-213ENST00000614496 SMIM1B2RUZ4 78 aa9.03□□□□□ -0.96
MSH6-213ENST00000614496 ACYP1P07311 99 aa9.03□□□□□ -0.96
MSH6-213ENST00000614496 HIST2H2BCQ6DN03 193 aa9.03□□□□□ -0.96
MSH6-213ENST00000614496 TIMM17BO60830 172 aa9.03□□□□□ -0.96
MSH6-213ENST00000614496 ANGP03950 147 aaKnown RBP9.03□□□□□ -0.96
MSH6-213ENST00000614496 EIF4EBP3O60516 100 aaPredicted RBP9.03□□□□□ -0.96
MSH6-213ENST00000614496 C1orf158Q8N1D5 194 aa9.03□□□□□ -0.96
MSH6-213ENST00000614496 LAMTOR3Q9UHA4 124 aa9.02□□□□□ -0.96
MSH6-213ENST00000614496 PLA2G2AP14555 144 aa9.02□□□□□ -0.97
MSH6-213ENST00000614496 SBSPONQ8IVN8 264 aa9.02□□□□□ -0.97
MSH6-213ENST00000614496 WFDC11Q8NEX6 87 aa9.01□□□□□ -0.97
MSH6-213ENST00000614496 CDC42SE2Q9NRR3 84 aa9.01□□□□□ -0.97
MSH6-213ENST00000614496 TRAV25A0A0B4J276 109 aa9.01□□□□□ -0.97
MSH6-213ENST00000614496 Q8N2B8 174 aa9□□□□□ -0.97
MSH6-213ENST00000614496 HRNRQ86YZ3 2850 aaPredicted RBP9□□□□□ -0.97
MSH6-213ENST00000614496 F5H768 121 aa9□□□□□ -0.97
MSH6-213ENST00000614496 LINC00643Q86TS7 51 aa9□□□□□ -0.97
MSH6-213ENST00000614496 C11orf72Q8NBR9 251 aa9□□□□□ -0.97
MSH6-213ENST00000614496 DCHS2Q6V1P9 2916 aa9□□□□□ -0.97
MSH6-213ENST00000614496 LITAFQ99732 161 aa8.99□□□□□ -0.97
MSH6-213ENST00000614496 SDIM1Q6ZPB5 146 aa8.99□□□□□ -0.97
MSH6-213ENST00000614496 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.99□□□□□ -0.97
MSH6-213ENST00000614496 H0YGX0 51 aa8.98□□□□□ -0.97
MSH6-213ENST00000614496 ORMDL1Q9P0S3 153 aa8.98□□□□□ -0.97
MSH6-213ENST00000614496 TRACP01848 142 aa8.98□□□□□ -0.97
MSH6-213ENST00000614496 NCR3O14931 201 aa8.97□□□□□ -0.97
MSH6-213ENST00000614496 BEAN1Q3B7T3 259 aa8.97□□□□□ -0.97
MSH6-213ENST00000614496 NTM-AS1Q6ZSK4 140 aa8.97□□□□□ -0.97
MSH6-213ENST00000614496 DAD1P61803 113 aa8.97□□□□□ -0.97
MSH6-213ENST00000614496 SMIM11BQ8TCY0 68 aa8.97□□□□□ -0.97
MSH6-213ENST00000614496 IGLV4-60A0A075B6I1 120 aa8.96□□□□□ -0.97
MSH6-213ENST00000614496 TRBV6-8A0A0A6YYG3 113 aa8.96□□□□□ -0.97
MSH6-213ENST00000614496 SOSTDC1Q6X4U4 206 aa8.96□□□□□ -0.97
MSH6-213ENST00000614496 A0A1B0GX51 115 aa8.96□□□□□ -0.98
MSH6-213ENST00000614496 FLNCQ14315 2725 aa8.95□□□□□ -0.98
MSH6-213ENST00000614496 CCL18P55774 89 aa8.95□□□□□ -0.98
MSH6-213ENST00000614496 MRPL23Q16540 153 aaKnown RBP8.95□□□□□ -0.98
MSH6-213ENST00000614496 HAMPP81172 84 aa8.94□□□□□ -0.98
MSH6-213ENST00000614496 DEFB135Q30KP9 77 aa8.93□□□□□ -0.98
MSH6-213ENST00000614496 TRBV6-4A0A1B0GX49 114 aa8.93□□□□□ -0.98
MSH6-213ENST00000614496 LINC00269Q8N2A0 174 aa8.93□□□□□ -0.98
MSH6-213ENST00000614496 M0QXV9 152 aa8.93□□□□□ -0.98
MSH6-213ENST00000614496 Q6Q795 121 aa8.92□□□□□ -0.98
MSH6-213ENST00000614496 C1orf43Q9BWL3 253 aa8.92□□□□□ -0.98
MSH6-213ENST00000614496 A0A087WYN8 130 aa8.92□□□□□ -0.98
MSH6-213ENST00000614496 IGLV5-39A0A0G2JS06 123 aa8.92□□□□□ -0.98
MSH6-213ENST00000614496 LINC00526Q96FQ7 95 aa8.92□□□□□ -0.98
MSH6-213ENST00000614496 PRR3P79522 188 aaKnown RBP8.91□□□□□ -0.98
MSH6-213ENST00000614496 LINC00337Q8N6G1 96 aa8.91□□□□□ -0.98
MSH6-213ENST00000614496 SVIPQ8NHG7 77 aa8.91□□□□□ -0.98
MSH6-213ENST00000614496 LINC01006Q8NI28 216 aa8.91□□□□□ -0.98
MSH6-213ENST00000614496 FAM240AA0A1B0GVK7 77 aa8.91□□□□□ -0.98
MSH6-213ENST00000614496 IBA57-AS1B1ANH7 110 aa8.91□□□□□ -0.98
MSH6-213ENST00000614496 UBL5Q9BZL1 73 aa8.91□□□□□ -0.98
MSH6-213ENST00000614496 LINC00482Q8N8I6 264 aa8.91□□□□□ -0.98
MSH6-213ENST00000614496 FAM218AQ96MZ4 157 aa8.91□□□□□ -0.98
MSH6-213ENST00000614496 SVEP1Q4LDE5 3571 aa8.91□□□□□ -0.98
MSH6-213ENST00000614496 BBC3Q96PG8 261 aaPredicted RBP8.9□□□□□ -0.98
MSH6-213ENST00000614496 CHD6Q8TD26 2715 aa8.9□□□□□ -0.98
MSH6-213ENST00000614496 ITPR1Q14643 2758 aa8.9□□□□□ -0.98
MSH6-213ENST00000614496 LINC00959A0A1B0GUT2 108 aa8.9□□□□□ -0.98
MSH6-213ENST00000614496 TMEM126AQ9H061 195 aa8.9□□□□□ -0.98
MSH6-213ENST00000614496 FAM222AQ5U5X8 452 aa8.9□□□□□ -0.99
MSH6-213ENST00000614496 PRO0255Q9UI72 69 aa8.89□□□□□ -0.99
MSH6-213ENST00000614496 FLNAP21333 2647 aaKnown RBP8.89□□□□□ -0.99
MSH6-213ENST00000614496 ATOX1O00244 68 aa8.89□□□□□ -0.99
MSH6-213ENST00000614496 CSDC2Q9Y534 153 aaKnown RBP8.88□□□□□ -0.99
MSH6-213ENST00000614496 IGLV5-45A0A087WSX0 123 aa8.88□□□□□ -0.99
MSH6-213ENST00000614496 KLK12Q9UKR0 248 aa8.87□□□□□ -0.99
MSH6-213ENST00000614496 ZANQ9Y493 2812 aa8.87□□□□□ -0.99
MSH6-213ENST00000614496 RPL28P46779 137 aaKnown RBP8.87□□□□□ -0.99
MSH6-213ENST00000614496 hADV29S1A0JD25 119 aa8.87□□□□□ -0.99
MSH6-213ENST00000614496 NHLRC4P0CG21 123 aaPredicted RBP8.87□□□□□ -0.99
MSH6-213ENST00000614496 A0A087WVE0 104 aa8.87□□□□□ -0.99
MSH6-213ENST00000614496 C3orf22Q8N5N4 141 aa8.87□□□□□ -0.99
MSH6-213ENST00000614496 CHCHD10Q8WYQ3 142 aaPredicted RBP8.87□□□□□ -0.99
MSH6-213ENST00000614496 TRAV23DV6A0A075B6W5 121 aa8.86□□□□□ -0.99
MSH6-213ENST00000614496 C9orf116Q5BN46 136 aaPredicted RBP8.86□□□□□ -0.99
MSH6-213ENST00000614496 SPENQ96T58 3664 aaKnown RBP8.86□□□□□ -0.99
MSH6-213ENST00000614496 UQCRQO14949 82 aa8.86□□□□□ -0.99
MSH6-213ENST00000614496 RPL18AQ02543 176 aaKnown RBP8.86□□□□□ -0.99
MSH6-213ENST00000614496 SPAG11BQ08648 103 aa8.86□□□□□ -0.99
MSH6-213ENST00000614496 FAM104AQ969W3 186 aa8.86□□□□□ -0.99
MSH6-213ENST00000614496 FHL2Q14192 279 aa8.86□□□□□ -0.99
MSH6-213ENST00000614496 TEX15Q9BXT5 2789 aa8.86□□□□□ -0.99
MSH6-213ENST00000614496 C6orf99Q4VX62 202 aa8.85□□□□□ -0.99
MSH6-213ENST00000614496 LRRC75A-AS1Q8N1F1 130 aa8.85□□□□□ -0.99
MSH6-213ENST00000614496 ZNF843Q8N446 348 aa8.85□□□□□ -0.99
MSH6-213ENST00000614496 ZNF561-AS1K7EIQ3 104 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms