RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 K7EN84 100 aa3.58□□□□□ -1.84
GPNMB-208ENST00000470994 ZNF25P17030 456 aaPredicted RBP3.58□□□□□ -1.84
GPNMB-208ENST00000470994 FCER1GP30273 86 aa3.58□□□□□ -1.84
GPNMB-208ENST00000470994 TAGLN2P37802 199 aaKnown RBP3.58□□□□□ -1.84
GPNMB-208ENST00000470994 PCP4P48539 62 aa3.58□□□□□ -1.84
GPNMB-208ENST00000470994 CD164L2Q6UWJ8 174 aa3.58□□□□□ -1.84
GPNMB-208ENST00000470994 ZNF664Q8N3J9 261 aa3.58□□□□□ -1.84
GPNMB-208ENST00000470994 ISOC2Q96AB3 205 aa3.58□□□□□ -1.84
GPNMB-208ENST00000470994 CNFNQ9BYD5 112 aa3.58□□□□□ -1.84
GPNMB-208ENST00000470994 IGLV4-69A0A075B6H9 119 aa3.57□□□□□ -1.84
GPNMB-208ENST00000470994 LOC107984640A0A0U1RRK4 108 aa3.57□□□□□ -1.84
GPNMB-208ENST00000470994 TSHBP01222 138 aa3.57□□□□□ -1.84
GPNMB-208ENST00000470994 MT-ND6P03923 174 aa3.57□□□□□ -1.84
GPNMB-208ENST00000470994 CAMPP49913 170 aa3.57□□□□□ -1.84
GPNMB-208ENST00000470994 KRTAP10-8P60410 259 aa3.57□□□□□ -1.84
GPNMB-208ENST00000470994 RPL18AQ02543 176 aaKnown RBP3.57□□□□□ -1.84
GPNMB-208ENST00000470994 RNASE13Q5GAN3 156 aaKnown RBP3.57□□□□□ -1.84
GPNMB-208ENST00000470994 C5orf38Q86SI9 138 aa3.57□□□□□ -1.84
GPNMB-208ENST00000470994 SLC51BQ86UW2 128 aa3.57□□□□□ -1.84
GPNMB-208ENST00000470994 CAMK2N2Q96S95 79 aa3.57□□□□□ -1.84
GPNMB-208ENST00000470994 CDC42SE2Q9NRR3 84 aa3.57□□□□□ -1.84
GPNMB-208ENST00000470994 HMCN2Q8NDA2 5059 aa3.56□□□□□ -1.84
GPNMB-208ENST00000470994 hCG_2014768A0A024R1R8 64 aa3.56□□□□□ -1.84
GPNMB-208ENST00000470994 A0A1B0GUT8 65 aa3.56□□□□□ -1.84
GPNMB-208ENST00000470994 A0A1W2PNN7 141 aa3.56□□□□□ -1.84
GPNMB-208ENST00000470994 C7orf77A4D0Y5 90 aa3.56□□□□□ -1.84
GPNMB-208ENST00000470994 C1orf196B1AJZ1 125 aa3.56□□□□□ -1.84
GPNMB-208ENST00000470994 SMKR1H3BMG3 65 aa3.56□□□□□ -1.84
GPNMB-208ENST00000470994 COX7A2LO14548 114 aa3.56□□□□□ -1.84
GPNMB-208ENST00000470994 VCYO14598 125 aa3.56□□□□□ -1.84
GPNMB-208ENST00000470994 ESDP10768 282 aa3.56□□□□□ -1.84
GPNMB-208ENST00000470994 SRSF9Q13242 221 aaKnown RBP eCLIP3.56□□□□□ -1.84
GPNMB-208ENST00000470994 C9orf116Q5BN46 136 aaPredicted RBP3.56□□□□□ -1.84
GPNMB-208ENST00000470994 C1orf137Q5JT78 98 aa3.56□□□□□ -1.84
GPNMB-208ENST00000470994 OPRPNQ99935 248 aaPredicted RBP3.56□□□□□ -1.84
GPNMB-208ENST00000470994 A0A087WZ39 114 aa3.55□□□□□ -1.84
GPNMB-208ENST00000470994 TRBV6-5A0A0K0K1A5 114 aa3.55□□□□□ -1.84
GPNMB-208ENST00000470994 HIGD1CA8MV81 97 aa3.55□□□□□ -1.84
GPNMB-208ENST00000470994 APOMO95445 188 aa3.55□□□□□ -1.84
GPNMB-208ENST00000470994 RAB4AP20338 218 aa3.55□□□□□ -1.84
GPNMB-208ENST00000470994 POLR2KP53803 58 aaKnown RBP3.55□□□□□ -1.84
GPNMB-208ENST00000470994 SMAGPQ0VAQ4 97 aa3.55□□□□□ -1.84
GPNMB-208ENST00000470994 RIGQ13278 110 aa3.55□□□□□ -1.84
GPNMB-208ENST00000470994 ZC2HC1BQ5TFG8 222 aa3.55□□□□□ -1.84
GPNMB-208ENST00000470994 FAM231DQ6ZW35 169 aa3.55□□□□□ -1.84
GPNMB-208ENST00000470994 PHF5AQ7RTV0 110 aaKnown RBP3.55□□□□□ -1.84
GPNMB-208ENST00000470994 AMN1Q8IY45 258 aa3.55□□□□□ -1.84
GPNMB-208ENST00000470994 EIF5A2Q9GZV4 153 aaKnown RBP3.55□□□□□ -1.84
GPNMB-208ENST00000470994 TMEM191AQ9H0A3 160 aa3.55□□□□□ -1.84
GPNMB-208ENST00000470994 A0A0A0MQY5 61 aa3.54□□□□□ -1.84
GPNMB-208ENST00000470994 ZNF727A8MUV8 499 aa3.54□□□□□ -1.84
GPNMB-208ENST00000470994 TMEM250H0YL14 139 aa3.54□□□□□ -1.84
GPNMB-208ENST00000470994 SPAG11BQ08648 103 aa3.54□□□□□ -1.84
GPNMB-208ENST00000470994 ALKAL2Q6UX46 152 aa3.54□□□□□ -1.84
GPNMB-208ENST00000470994 MRPL52Q86TS9 123 aaKnown RBP3.54□□□□□ -1.84
GPNMB-208ENST00000470994 NUP35Q8NFH5 326 aa3.54□□□□□ -1.84
GPNMB-208ENST00000470994 TSKUQ8WUA8 353 aa3.54□□□□□ -1.84
GPNMB-208ENST00000470994 KIR2DL4Q99706 377 aa3.54□□□□□ -1.84
GPNMB-208ENST00000470994 LITAFQ99732 161 aa3.54□□□□□ -1.84
GPNMB-208ENST00000470994 SMIM7Q9BQ49 75 aa3.54□□□□□ -1.84
GPNMB-208ENST00000470994 PSORS1C2Q9UIG4 136 aa3.54□□□□□ -1.84
GPNMB-208ENST00000470994 FAT3Q8TDW7 4589 aa3.53□□□□□ -1.84
GPNMB-208ENST00000470994 TRBV27A0A0K0K1C4 114 aa3.53□□□□□ -1.84
GPNMB-208ENST00000470994 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.53□□□□□ -1.84
GPNMB-208ENST00000470994 PPP1R17O96001 155 aa3.53□□□□□ -1.84
GPNMB-208ENST00000470994 LINC01547P58512 204 aaPredicted RBP3.53□□□□□ -1.84
GPNMB-208ENST00000470994 GAGE2EQ4V326 116 aa3.53□□□□□ -1.84
GPNMB-208ENST00000470994 Q6ZUT4 128 aa3.53□□□□□ -1.84
GPNMB-208ENST00000470994 TCTE3Q8IZS6 198 aa3.53□□□□□ -1.84
GPNMB-208ENST00000470994 ORAOV1Q8WV07 137 aa3.53□□□□□ -1.84
GPNMB-208ENST00000470994 C2orf48Q96LS8 159 aa3.53□□□□□ -1.84
GPNMB-208ENST00000470994 FAM210AQ96ND0 272 aa3.53□□□□□ -1.84
GPNMB-208ENST00000470994 OSTCQ9NRP0 149 aa3.53□□□□□ -1.84
GPNMB-208ENST00000470994 GAGE2DQ9UEU5 116 aa3.53□□□□□ -1.84
GPNMB-208ENST00000470994 UBE2D4Q9Y2X8 147 aa3.53□□□□□ -1.84
GPNMB-208ENST00000470994 NDUFA1O15239 70 aa3.52□□□□□ -1.85
GPNMB-208ENST00000470994 CKS2P33552 79 aa3.52□□□□□ -1.85
GPNMB-208ENST00000470994 UBE2BP63146 152 aa3.52□□□□□ -1.85
GPNMB-208ENST00000470994 MRPL51Q4U2R6 128 aaKnown RBP3.52□□□□□ -1.85
GPNMB-208ENST00000470994 FAM19A5Q7Z5A7 132 aaPredicted RBP3.52□□□□□ -1.85
GPNMB-208ENST00000470994 LINC01551Q86U37 167 aa3.52□□□□□ -1.85
GPNMB-208ENST00000470994 DIRC1Q969H9 104 aa3.52□□□□□ -1.85
GPNMB-208ENST00000470994 IMMP2LQ96T52 175 aa3.52□□□□□ -1.85
GPNMB-208ENST00000470994 FAM168BA1KXE4 195 aa3.51□□□□□ -1.85
GPNMB-208ENST00000470994 PPP1R2P9O14990 202 aa3.51□□□□□ -1.85
GPNMB-208ENST00000470994 IGLV7-43P04211 117 aa3.51□□□□□ -1.85
GPNMB-208ENST00000470994 SRP19P09132 144 aaKnown RBP3.51□□□□□ -1.85
GPNMB-208ENST00000470994 RPL39P62891 51 aaKnown RBP3.51□□□□□ -1.85
GPNMB-208ENST00000470994 ADIRFQ15847 76 aa3.51□□□□□ -1.85
GPNMB-208ENST00000470994 TMEM241Q24JQ0 296 aa3.51□□□□□ -1.85
GPNMB-208ENST00000470994 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
GPNMB-208ENST00000470994 FAM104BQ5XKR9 115 aa3.51□□□□□ -1.85
GPNMB-208ENST00000470994 UNQ6190/PRO20217Q6UXQ8 127 aa3.51□□□□□ -1.85
GPNMB-208ENST00000470994 NAT8BQ9UHF3 227 aa3.51□□□□□ -1.85
GPNMB-208ENST00000470994 CSDC2Q9Y534 153 aaKnown RBP3.51□□□□□ -1.85
GPNMB-208ENST00000470994 V9GYV3 84 aa3.51□□□□□ -1.85
GPNMB-208ENST00000470994 TCAPO15273 167 aa3.5□□□□□ -1.85
GPNMB-208ENST00000470994 TNFRSF6BO95407 300 aa3.5□□□□□ -1.85
GPNMB-208ENST00000470994 RAB5AP20339 215 aa3.5□□□□□ -1.85
GPNMB-208ENST00000470994 UBE2D1P51668 147 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms