RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 C16orf74Q96GX8 76 aa4.95□□□□□ -1.62
RTN4-203ENST00000357376 LECT2O14960 151 aa4.94□□□□□ -1.62
RTN4-203ENST00000357376 DEFB4AO15263 64 aa4.94□□□□□ -1.62
RTN4-203ENST00000357376 TIRAPP58753 221 aa4.94□□□□□ -1.62
RTN4-203ENST00000357376 ANGP03950 147 aaKnown RBP4.94□□□□□ -1.62
RTN4-203ENST00000357376 IGKV3D-7A0A0C4DH55 119 aa4.94□□□□□ -1.62
RTN4-203ENST00000357376 FHL3Q13643 280 aa4.94□□□□□ -1.62
RTN4-203ENST00000357376 HIST2H2BCQ6DN03 193 aa4.94□□□□□ -1.62
RTN4-203ENST00000357376 WFDC11Q8NEX6 87 aa4.94□□□□□ -1.62
RTN4-203ENST00000357376 OVOL2Q9BRP0 275 aa4.94□□□□□ -1.62
RTN4-203ENST00000357376 SPENQ96T58 3664 aaKnown RBP4.93□□□□□ -1.62
RTN4-203ENST00000357376 CCDC179H3BU77 68 aa4.93□□□□□ -1.62
RTN4-203ENST00000357376 C14orf132Q9NPU4 83 aa4.93□□□□□ -1.62
RTN4-203ENST00000357376 LAMTOR3Q9UHA4 124 aa4.93□□□□□ -1.62
RTN4-203ENST00000357376 SMIM1B2RUZ4 78 aa4.92□□□□□ -1.62
RTN4-203ENST00000357376 FLNCQ14315 2725 aa4.92□□□□□ -1.62
RTN4-203ENST00000357376 F5H768 121 aa4.92□□□□□ -1.62
RTN4-203ENST00000357376 SLPIP03973 132 aa4.92□□□□□ -1.62
RTN4-203ENST00000357376 DCHS2Q6V1P9 2916 aa4.92□□□□□ -1.62
RTN4-203ENST00000357376 TRAV25A0A0B4J276 109 aa4.92□□□□□ -1.62
RTN4-203ENST00000357376 ACYP1P07311 99 aa4.92□□□□□ -1.62
RTN4-203ENST00000357376 C1orf158Q8N1D5 194 aa4.92□□□□□ -1.62
RTN4-203ENST00000357376 HRNRQ86YZ3 2850 aaPredicted RBP4.92□□□□□ -1.62
RTN4-203ENST00000357376 TIMM17BO60830 172 aa4.91□□□□□ -1.62
RTN4-203ENST00000357376 PLA2G2AP14555 144 aa4.91□□□□□ -1.62
RTN4-203ENST00000357376 CDC42SE2Q9NRR3 84 aa4.91□□□□□ -1.62
RTN4-203ENST00000357376 DAD1P61803 113 aa4.91□□□□□ -1.62
RTN4-203ENST00000357376 SVEP1Q4LDE5 3571 aa4.91□□□□□ -1.62
RTN4-203ENST00000357376 EIF4EBP3O60516 100 aaPredicted RBP4.9□□□□□ -1.62
RTN4-203ENST00000357376 C11orf72Q8NBR9 251 aa4.9□□□□□ -1.62
RTN4-203ENST00000357376 ORMDL1Q9P0S3 153 aa4.9□□□□□ -1.63
RTN4-203ENST00000357376 Q8N2B8 174 aa4.9□□□□□ -1.63
RTN4-203ENST00000357376 TRBV6-8A0A0A6YYG3 113 aa4.89□□□□□ -1.63
RTN4-203ENST00000357376 H0YGX0 51 aa4.89□□□□□ -1.63
RTN4-203ENST00000357376 SDIM1Q6ZPB5 146 aa4.89□□□□□ -1.63
RTN4-203ENST00000357376 LINC00643Q86TS7 51 aa4.89□□□□□ -1.63
RTN4-203ENST00000357376 NCR3O14931 201 aa4.89□□□□□ -1.63
RTN4-203ENST00000357376 DEFB135Q30KP9 77 aa4.89□□□□□ -1.63
RTN4-203ENST00000357376 IGLV4-60A0A075B6I1 120 aa4.89□□□□□ -1.63
RTN4-203ENST00000357376 TRACP01848 142 aa4.89□□□□□ -1.63
RTN4-203ENST00000357376 SBSPONQ8IVN8 264 aa4.89□□□□□ -1.63
RTN4-203ENST00000357376 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.89□□□□□ -1.63
RTN4-203ENST00000357376 LITAFQ99732 161 aa4.89□□□□□ -1.63
RTN4-203ENST00000357376 BEAN1Q3B7T3 259 aa4.88□□□□□ -1.63
RTN4-203ENST00000357376 ITPR1Q14643 2758 aa4.88□□□□□ -1.63
RTN4-203ENST00000357376 NTM-AS1Q6ZSK4 140 aa4.88□□□□□ -1.63
RTN4-203ENST00000357376 SMIM11BQ8TCY0 68 aa4.88□□□□□ -1.63
RTN4-203ENST00000357376 HAMPP81172 84 aa4.88□□□□□ -1.63
RTN4-203ENST00000357376 LINC00269Q8N2A0 174 aa4.88□□□□□ -1.63
RTN4-203ENST00000357376 FLNAP21333 2647 aaKnown RBP4.87□□□□□ -1.63
RTN4-203ENST00000357376 TRBV6-4A0A1B0GX49 114 aa4.87□□□□□ -1.63
RTN4-203ENST00000357376 A0A1B0GX51 115 aa4.87□□□□□ -1.63
RTN4-203ENST00000357376 LINC01006Q8NI28 216 aa4.87□□□□□ -1.63
RTN4-203ENST00000357376 CCL18P55774 89 aa4.87□□□□□ -1.63
RTN4-203ENST00000357376 SOSTDC1Q6X4U4 206 aa4.87□□□□□ -1.63
RTN4-203ENST00000357376 LINC00482Q8N8I6 264 aa4.87□□□□□ -1.63
RTN4-203ENST00000357376 CHD6Q8TD26 2715 aa4.87□□□□□ -1.63
RTN4-203ENST00000357376 LINC00526Q96FQ7 95 aa4.87□□□□□ -1.63
RTN4-203ENST00000357376 UBL5Q9BZL1 73 aa4.87□□□□□ -1.63
RTN4-203ENST00000357376 ZANQ9Y493 2812 aa4.86□□□□□ -1.63
RTN4-203ENST00000357376 MRPL23Q16540 153 aaKnown RBP4.86□□□□□ -1.63
RTN4-203ENST00000357376 FAM222AQ5U5X8 452 aa4.86□□□□□ -1.63
RTN4-203ENST00000357376 BBC3Q96PG8 261 aaPredicted RBP4.86□□□□□ -1.63
RTN4-203ENST00000357376 PRO0255Q9UI72 69 aa4.86□□□□□ -1.63
RTN4-203ENST00000357376 IBA57-AS1B1ANH7 110 aa4.86□□□□□ -1.63
RTN4-203ENST00000357376 CITED1Q99966 193 aa4.86□□□□□ -1.63
RTN4-203ENST00000357376 A0A087WYN8 130 aa4.86□□□□□ -1.63
RTN4-203ENST00000357376 IGLV5-39A0A0G2JS06 123 aa4.85□□□□□ -1.63
RTN4-203ENST00000357376 LINC00959A0A1B0GUT2 108 aa4.85□□□□□ -1.63
RTN4-203ENST00000357376 PRR3P79522 188 aaKnown RBP4.85□□□□□ -1.63
RTN4-203ENST00000357376 ZNF843Q8N446 348 aa4.85□□□□□ -1.63
RTN4-203ENST00000357376 LINC00337Q8N6G1 96 aa4.85□□□□□ -1.63
RTN4-203ENST00000357376 FAM240AA0A1B0GVK7 77 aa4.85□□□□□ -1.63
RTN4-203ENST00000357376 TMEM126AQ9H061 195 aa4.85□□□□□ -1.63
RTN4-203ENST00000357376 KLK12Q9UKR0 248 aa4.85□□□□□ -1.63
RTN4-203ENST00000357376 CUBNO60494 3623 aa4.85□□□□□ -1.63
RTN4-203ENST00000357376 ZNF561-AS1K7EIQ3 104 aa4.85□□□□□ -1.63
RTN4-203ENST00000357376 M0QXV9 152 aa4.85□□□□□ -1.63
RTN4-203ENST00000357376 Q6Q795 121 aa4.84□□□□□ -1.63
RTN4-203ENST00000357376 FAM218AQ96MZ4 157 aa4.84□□□□□ -1.63
RTN4-203ENST00000357376 CSDC2Q9Y534 153 aaKnown RBP4.84□□□□□ -1.63
RTN4-203ENST00000357376 FASNP49327 2511 aaKnown RBP4.84□□□□□ -1.63
RTN4-203ENST00000357376 ATOX1O00244 68 aa4.84□□□□□ -1.63
RTN4-203ENST00000357376 SPAG11BQ08648 103 aa4.84□□□□□ -1.63
RTN4-203ENST00000357376 LRRC75A-AS1Q8N1F1 130 aa4.84□□□□□ -1.63
RTN4-203ENST00000357376 CHCHD10Q8WYQ3 142 aaPredicted RBP4.84□□□□□ -1.63
RTN4-203ENST00000357376 IGSF10Q6WRI0 2623 aa4.84□□□□□ -1.63
RTN4-203ENST00000357376 CRYBG3Q68DQ2 2970 aa4.84□□□□□ -1.63
RTN4-203ENST00000357376 RPL18AQ02543 176 aaKnown RBP4.84□□□□□ -1.64
RTN4-203ENST00000357376 CELSR1Q9NYQ6 3014 aa4.84□□□□□ -1.64
RTN4-203ENST00000357376 TEX15Q9BXT5 2789 aa4.84□□□□□ -1.64
RTN4-203ENST00000357376 IGLV5-45A0A087WSX0 123 aa4.83□□□□□ -1.64
RTN4-203ENST00000357376 REG3AQ06141 175 aa4.83□□□□□ -1.64
RTN4-203ENST00000357376 ITPR3Q14573 2671 aa4.83□□□□□ -1.64
RTN4-203ENST00000357376 CFAP46Q8IYW2 2715 aa4.83□□□□□ -1.64
RTN4-203ENST00000357376 APOC4P55056 127 aa4.83□□□□□ -1.64
RTN4-203ENST00000357376 C6orf99Q4VX62 202 aa4.83□□□□□ -1.64
RTN4-203ENST00000357376 C9orf116Q5BN46 136 aaPredicted RBP4.83□□□□□ -1.64
RTN4-203ENST00000357376 DSCR8Q96T75 97 aa4.83□□□□□ -1.64
RTN4-203ENST00000357376 RPL28P46779 137 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms