RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 TRBV7-6A0A0J9YX20 115 aa8.69□□□□□ -1.02
SHANK2-201ENST00000338508 PCOTHQ58A44 107 aa8.69□□□□□ -1.02
SHANK2-201ENST00000338508 LINC01556Q5JQF7 62 aa8.69□□□□□ -1.02
SHANK2-201ENST00000338508 CD164L2Q6UWJ8 174 aa8.68□□□□□ -1.02
SHANK2-201ENST00000338508 LRRC75A-AS1Q8N1F1 130 aa8.68□□□□□ -1.02
SHANK2-201ENST00000338508 C9orf116Q5BN46 136 aaPredicted RBP8.68□□□□□ -1.02
SHANK2-201ENST00000338508 LINC00959A0A1B0GUT2 108 aa8.68□□□□□ -1.02
SHANK2-201ENST00000338508 TRBV6-4A0A1B0GX49 114 aa8.68□□□□□ -1.02
SHANK2-201ENST00000338508 ODF3BA8MYP8 253 aa8.68□□□□□ -1.02
SHANK2-201ENST00000338508 NAV3Q8IVL0 2385 aa8.67□□□□□ -1.02
SHANK2-201ENST00000338508 LELP1Q5T871 98 aa8.67□□□□□ -1.02
SHANK2-201ENST00000338508 Q6ZS46 218 aa8.67□□□□□ -1.02
SHANK2-201ENST00000338508 SOSTDC1Q6X4U4 206 aa8.67□□□□□ -1.02
SHANK2-201ENST00000338508 ODF3Q96PU9 254 aa8.67□□□□□ -1.02
SHANK2-201ENST00000338508 C1orf137Q5JT78 98 aa8.66□□□□□ -1.02
SHANK2-201ENST00000338508 C6orf223Q8N319 242 aa8.66□□□□□ -1.02
SHANK2-201ENST00000338508 LINC01006Q8NI28 216 aa8.66□□□□□ -1.02
SHANK2-201ENST00000338508 LINC00208Q96KT6 92 aa8.66□□□□□ -1.02
SHANK2-201ENST00000338508 CRIP1P50238 77 aa8.66□□□□□ -1.02
SHANK2-201ENST00000338508 Q6ZSR3 168 aa8.66□□□□□ -1.02
SHANK2-201ENST00000338508 LINC00474Q9P2X8 69 aa8.66□□□□□ -1.02
SHANK2-201ENST00000338508 PLA2G2AP14555 144 aa8.65□□□□□ -1.02
SHANK2-201ENST00000338508 COL4A3Q01955 1670 aa8.65□□□□□ -1.02
SHANK2-201ENST00000338508 NDUFA7O95182 113 aa8.65□□□□□ -1.02
SHANK2-201ENST00000338508 FSHBP01225 129 aa8.65□□□□□ -1.02
SHANK2-201ENST00000338508 PRR3P79522 188 aaKnown RBP8.65□□□□□ -1.02
SHANK2-201ENST00000338508 ATP5EP2Q5VTU8 51 aa8.65□□□□□ -1.02
SHANK2-201ENST00000338508 C1orf229Q6ZS94 237 aaPredicted RBP8.65□□□□□ -1.02
SHANK2-201ENST00000338508 SBSPONQ8IVN8 264 aa8.65□□□□□ -1.03
SHANK2-201ENST00000338508 RPL28P46779 137 aaKnown RBP8.65□□□□□ -1.03
SHANK2-201ENST00000338508 ZNF73O43830 326 aaPredicted RBP8.64□□□□□ -1.03
SHANK2-201ENST00000338508 ZNF702PQ9H963 129 aa8.64□□□□□ -1.03
SHANK2-201ENST00000338508 CYSRT1A8MQ03 144 aa8.64□□□□□ -1.03
SHANK2-201ENST00000338508 BEAN1Q3B7T3 259 aa8.64□□□□□ -1.03
SHANK2-201ENST00000338508 EBI3Q14213 229 aa8.64□□□□□ -1.03
SHANK2-201ENST00000338508 REG3GQ6UW15 175 aa8.63□□□□□ -1.03
SHANK2-201ENST00000338508 LINC01547P58512 204 aaPredicted RBP8.63□□□□□ -1.03
SHANK2-201ENST00000338508 MBD6Q96DN6 1003 aa8.63□□□□□ -1.03
SHANK2-201ENST00000338508 LST1O00453 97 aa8.63□□□□□ -1.03
SHANK2-201ENST00000338508 FBXL19-AS1Q494R0 122 aa8.63□□□□□ -1.03
SHANK2-201ENST00000338508 A0A1B0GXF2 115 aa8.62□□□□□ -1.03
SHANK2-201ENST00000338508 TSHBP01222 138 aa8.62□□□□□ -1.03
SHANK2-201ENST00000338508 TRBV30A0A0K0K1B3 111 aa8.62□□□□□ -1.03
SHANK2-201ENST00000338508 CUL9Q8IWT3 2517 aa8.62□□□□□ -1.03
SHANK2-201ENST00000338508 RNF185Q96GF1 192 aa8.62□□□□□ -1.03
SHANK2-201ENST00000338508 PMAIP1Q13794 54 aa8.61□□□□□ -1.03
SHANK2-201ENST00000338508 NDUFC1O43677 76 aa8.61□□□□□ -1.03
SHANK2-201ENST00000338508 UNQ6190/PRO20217Q6UXQ8 127 aa8.61□□□□□ -1.03
SHANK2-201ENST00000338508 CRIP2P52943 208 aaPredicted RBP8.61□□□□□ -1.03
SHANK2-201ENST00000338508 PSPHP1O15172 72 aa8.61□□□□□ -1.03
SHANK2-201ENST00000338508 C1orf195Q5TG92 126 aa8.61□□□□□ -1.03
SHANK2-201ENST00000338508 SRCAPQ6ZRS2 3230 aa8.6□□□□□ -1.03
SHANK2-201ENST00000338508 EDN2P20800 178 aa8.6□□□□□ -1.03
SHANK2-201ENST00000338508 CCDC179H3BU77 68 aa8.6□□□□□ -1.03
SHANK2-201ENST00000338508 MYO18BQ8IUG5 2567 aa8.59□□□□□ -1.03
SHANK2-201ENST00000338508 PRR9Q5T870 116 aa8.59□□□□□ -1.03
SHANK2-201ENST00000338508 ATP5EP56381 51 aaPredicted RBP8.59□□□□□ -1.03
SHANK2-201ENST00000338508 PRLHP81277 87 aa8.58□□□□□ -1.04
SHANK2-201ENST00000338508 PSMG3-AS1Q96PY0 264 aa8.58□□□□□ -1.04
SHANK2-201ENST00000338508 RNASE3P12724 160 aaKnown RBP8.58□□□□□ -1.04
SHANK2-201ENST00000338508 MRGPRG-AS1Q2M3A8 158 aa8.58□□□□□ -1.04
SHANK2-201ENST00000338508 LINC00337Q8N6G1 96 aa8.58□□□□□ -1.04
SHANK2-201ENST00000338508 ACACBO00763 2458 aa8.58□□□□□ -1.04
SHANK2-201ENST00000338508 CRYGAP11844 174 aa8.57□□□□□ -1.04
SHANK2-201ENST00000338508 Q9BRP9 147 aa8.57□□□□□ -1.04
SHANK2-201ENST00000338508 IGKV2D-30A0A075B6S6 120 aa8.56□□□□□ -1.04
SHANK2-201ENST00000338508 IGKV2-30P06310 120 aa8.56□□□□□ -1.04
SHANK2-201ENST00000338508 PYGO1Q9Y3Y4 419 aa8.56□□□□□ -1.04
SHANK2-201ENST00000338508 COX17Q14061 63 aa8.56□□□□□ -1.04
SHANK2-201ENST00000338508 TRBV10-3A0A0K0K1G6 114 aa8.56□□□□□ -1.04
SHANK2-201ENST00000338508 Q6ZTC4 211 aa8.56□□□□□ -1.04
SHANK2-201ENST00000338508 GAS8-AS1O95177 125 aa8.56□□□□□ -1.04
SHANK2-201ENST00000338508 COX6A2Q02221 97 aa8.56□□□□□ -1.04
SHANK2-201ENST00000338508 LINC00694P0DN24 101 aa8.56□□□□□ -1.04
SHANK2-201ENST00000338508 CACNA1AO00555 2505 aa8.55□□□□□ -1.04
SHANK2-201ENST00000338508 C2orf48Q96LS8 159 aa8.55□□□□□ -1.04
SHANK2-201ENST00000338508 C1orf134Q5TEV5 83 aa8.55□□□□□ -1.04
SHANK2-201ENST00000338508 Q9UF83 564 aa8.55□□□□□ -1.04
SHANK2-201ENST00000338508 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.55□□□□□ -1.04
SHANK2-201ENST00000338508 BRWD1-AS2P59051 145 aa8.54□□□□□ -1.04
SHANK2-201ENST00000338508 NRACQ8N912 160 aa8.54□□□□□ -1.04
SHANK2-201ENST00000338508 H0Y9P7 68 aa8.53□□□□□ -1.04
SHANK2-201ENST00000338508 CDC42SE2Q9NRR3 84 aa8.53□□□□□ -1.04
SHANK2-201ENST00000338508 COL5A1P20908 1838 aaPredicted RBP8.53□□□□□ -1.04
SHANK2-201ENST00000338508 NTM-AS1Q6ZSK4 140 aa8.53□□□□□ -1.04
SHANK2-201ENST00000338508 C7orf65Q6ZTY9 151 aa8.53□□□□□ -1.04
SHANK2-201ENST00000338508 XGP55808 180 aa8.52□□□□□ -1.05
SHANK2-201ENST00000338508 LRP4O75096 1905 aa8.52□□□□□ -1.05
SHANK2-201ENST00000338508 C11orf71Q6IPW1 123 aa8.52□□□□□ -1.05
SHANK2-201ENST00000338508 Q8IZM0 81 aa8.52□□□□□ -1.05
SHANK2-201ENST00000338508 A0A087WYN8 130 aa8.52□□□□□ -1.05
SHANK2-201ENST00000338508 A8MTW9 85 aa8.52□□□□□ -1.05
SHANK2-201ENST00000338508 COX7CP15954 63 aa8.52□□□□□ -1.05
SHANK2-201ENST00000338508 U3KQK5 164 aa8.52□□□□□ -1.05
SHANK2-201ENST00000338508 A0A087WVE0 104 aa8.52□□□□□ -1.05
SHANK2-201ENST00000338508 LINC00575Q6W349 94 aa8.52□□□□□ -1.05
SHANK2-201ENST00000338508 C11orf21Q9P2W6 132 aa8.51□□□□□ -1.05
SHANK2-201ENST00000338508 A0A087WSZ3 146 aa8.51□□□□□ -1.05
SHANK2-201ENST00000338508 SPACA4Q8TDM5 124 aa8.51□□□□□ -1.05
SHANK2-201ENST00000338508 PTPRSQ13332 1948 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms