RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 STPG4Q8N801 248 aa8.72□□□□□ -1.01
VARS-226ENST00000483275 CHCHD10Q8WYQ3 142 aaPredicted RBP8.72□□□□□ -1.01
VARS-226ENST00000483275 RPL39LQ96EH5 51 aaKnown RBP8.72□□□□□ -1.01
VARS-226ENST00000483275 LINC00526Q96FQ7 95 aa8.72□□□□□ -1.01
VARS-226ENST00000483275 RPS10P46783 165 aaKnown RBP8.71□□□□□ -1.02
VARS-226ENST00000483275 GATD1Q8NB37 220 aa8.71□□□□□ -1.02
VARS-226ENST00000483275 RNASEKQ6P5S7 137 aaKnown RBP8.7□□□□□ -1.02
VARS-226ENST00000483275 NUP35Q8NFH5 326 aa8.7□□□□□ -1.02
VARS-226ENST00000483275 TMEM191AQ9H0A3 160 aa8.7□□□□□ -1.02
VARS-226ENST00000483275 PPP1R2P9O14990 202 aa8.69□□□□□ -1.02
VARS-226ENST00000483275 PNRC1Q12796 327 aaPredicted RBP8.69□□□□□ -1.02
VARS-226ENST00000483275 AMMECR1LQ6DCA0 310 aa8.69□□□□□ -1.02
VARS-226ENST00000483275 LINC01600Q96MT4 127 aa8.69□□□□□ -1.02
VARS-226ENST00000483275 GVQW2A0A096LPI5 108 aaPredicted RBP8.68□□□□□ -1.02
VARS-226ENST00000483275 SMIM27A0A1W2PRY6 76 aa8.68□□□□□ -1.02
VARS-226ENST00000483275 XCL1P47992 114 aa8.68□□□□□ -1.02
VARS-226ENST00000483275 IFITM2Q01629 132 aa8.68□□□□□ -1.02
VARS-226ENST00000483275 CFAP161Q6P656 301 aa8.68□□□□□ -1.02
VARS-226ENST00000483275 A0A1B0GW15 77 aa8.67□□□□□ -1.02
VARS-226ENST00000483275 S100A8P05109 93 aa8.67□□□□□ -1.02
VARS-226ENST00000483275 FGF6P10767 208 aa8.67□□□□□ -1.02
VARS-226ENST00000483275 FOXI1Q12951 378 aa8.67□□□□□ -1.02
VARS-226ENST00000483275 UQCC3Q6UW78 93 aa8.67□□□□□ -1.02
VARS-226ENST00000483275 APCSP02743 223 aa8.66□□□□□ -1.02
VARS-226ENST00000483275 MT-ND4LP03901 98 aa8.66□□□□□ -1.02
VARS-226ENST00000483275 CAMPP49913 170 aa8.66□□□□□ -1.02
VARS-226ENST00000483275 MRAP2Q96G30 205 aa8.66□□□□□ -1.02
VARS-226ENST00000483275 A0A0J9YXV3 536 aa8.65□□□□□ -1.02
VARS-226ENST00000483275 SDHAF1A6NFY7 115 aa8.65□□□□□ -1.02
VARS-226ENST00000483275 GAS8-AS1O95177 125 aa8.65□□□□□ -1.02
VARS-226ENST00000483275 RAB4AP20338 218 aa8.65□□□□□ -1.02
VARS-226ENST00000483275 PMCHP20382 165 aa8.65□□□□□ -1.02
VARS-226ENST00000483275 AMN1Q8IY45 258 aa8.65□□□□□ -1.02
VARS-226ENST00000483275 ANAPC16Q96DE5 110 aa8.65□□□□□ -1.02
VARS-226ENST00000483275 ST20Q9HBF5 79 aa8.65□□□□□ -1.02
VARS-226ENST00000483275 F8W036 122 aa8.64□□□□□ -1.03
VARS-226ENST00000483275 CCL25O15444 150 aa8.64□□□□□ -1.03
VARS-226ENST00000483275 NCR2O95944 276 aa8.64□□□□□ -1.03
VARS-226ENST00000483275 PPP1R17O96001 155 aa8.64□□□□□ -1.03
VARS-226ENST00000483275 MRPL54Q6P161 138 aaKnown RBP8.64□□□□□ -1.03
VARS-226ENST00000483275 CARD19Q96LW7 228 aa8.64□□□□□ -1.03
VARS-226ENST00000483275 I3L3M4 83 aa8.63□□□□□ -1.03
VARS-226ENST00000483275 HBBP68871 147 aa8.63□□□□□ -1.03
VARS-226ENST00000483275 COMMD7Q86VX2 200 aa8.63□□□□□ -1.03
VARS-226ENST00000483275 TRBV6-5A0A0K0K1A5 114 aa8.62□□□□□ -1.03
VARS-226ENST00000483275 KRTAP10-8P60410 259 aa8.62□□□□□ -1.03
VARS-226ENST00000483275 FAM104BQ5XKR9 115 aa8.62□□□□□ -1.03
VARS-226ENST00000483275 OR5A1Q8NGJ0 315 aa8.62□□□□□ -1.03
VARS-226ENST00000483275 TMEM242Q9NWH2 141 aa8.62□□□□□ -1.03
VARS-226ENST00000483275 LINC00959A0A1B0GUT2 108 aa8.61□□□□□ -1.03
VARS-226ENST00000483275 TMEM218A2RU14 115 aa8.61□□□□□ -1.03
VARS-226ENST00000483275 SMKR1H3BMG3 65 aa8.61□□□□□ -1.03
VARS-226ENST00000483275 TSHBP01222 138 aa8.61□□□□□ -1.03
VARS-226ENST00000483275 CKS2P33552 79 aa8.61□□□□□ -1.03
VARS-226ENST00000483275 ATP5L2Q7Z4Y8 100 aa8.61□□□□□ -1.03
VARS-226ENST00000483275 LINC00862A6NCI5 91 aa8.6□□□□□ -1.03
VARS-226ENST00000483275 MRPL51Q4U2R6 128 aaKnown RBP8.6□□□□□ -1.03
VARS-226ENST00000483275 REG3GQ6UW15 175 aa8.6□□□□□ -1.03
VARS-226ENST00000483275 SPINK6Q6UWN8 80 aa8.6□□□□□ -1.03
VARS-226ENST00000483275 IGHV1-58A0A0C4DH39 117 aa8.59□□□□□ -1.03
VARS-226ENST00000483275 H7C423 109 aa8.59□□□□□ -1.03
VARS-226ENST00000483275 VCYO14598 125 aa8.59□□□□□ -1.03
VARS-226ENST00000483275 FCER1GP30273 86 aa8.59□□□□□ -1.03
VARS-226ENST00000483275 SYCNQ0VAF6 134 aa8.59□□□□□ -1.03
VARS-226ENST00000483275 GAGE2BQ13066 116 aa8.59□□□□□ -1.03
VARS-226ENST00000483275 TMEM101Q96IK0 257 aa8.59□□□□□ -1.03
VARS-226ENST00000483275 BTF3L4Q96K17 158 aa8.59□□□□□ -1.03
VARS-226ENST00000483275 SEC11CQ9BY50 192 aa8.59□□□□□ -1.03
VARS-226ENST00000483275 A0A1B0GXF2 115 aa8.58□□□□□ -1.04
VARS-226ENST00000483275 ZNF25P17030 456 aaPredicted RBP8.58□□□□□ -1.04
VARS-226ENST00000483275 SUMO2P61956 95 aaKnown RBP8.58□□□□□ -1.04
VARS-226ENST00000483275 SRSF9Q13242 221 aaKnown RBP eCLIP8.58□□□□□ -1.04
VARS-226ENST00000483275 RNASE13Q5GAN3 156 aaKnown RBP8.58□□□□□ -1.04
VARS-226ENST00000483275 Q6ZRP5 223 aa8.58□□□□□ -1.04
VARS-226ENST00000483275 KIR2DL4Q99706 377 aa8.58□□□□□ -1.04
VARS-226ENST00000483275 LINC00474Q9P2X8 69 aa8.58□□□□□ -1.04
VARS-226ENST00000483275 LPAP08519 4548 aa8.58□□□□□ -1.04
VARS-226ENST00000483275 TRBV27A0A0K0K1C4 114 aa8.57□□□□□ -1.04
VARS-226ENST00000483275 ESDP10768 282 aa8.57□□□□□ -1.04
VARS-226ENST00000483275 ADCYAP1P18509 176 aa8.57□□□□□ -1.04
VARS-226ENST00000483275 PTTG1IPP53801 180 aa8.57□□□□□ -1.04
VARS-226ENST00000483275 POLR2KP53803 58 aaKnown RBP8.57□□□□□ -1.04
VARS-226ENST00000483275 SMAGPQ0VAQ4 97 aa8.57□□□□□ -1.04
VARS-226ENST00000483275 CTDSP1Q9GZU7 261 aa8.57□□□□□ -1.04
VARS-226ENST00000483275 IGLV4-69A0A075B6H9 119 aa8.56□□□□□ -1.04
VARS-226ENST00000483275 A0A1W2PNN7 141 aa8.56□□□□□ -1.04
VARS-226ENST00000483275 D6R8Y8 96 aa8.56□□□□□ -1.04
VARS-226ENST00000483275 ZNF561-AS1K7EIQ3 104 aa8.56□□□□□ -1.04
VARS-226ENST00000483275 PPBPP02775 128 aa8.56□□□□□ -1.04
VARS-226ENST00000483275 NRACQ8N912 160 aa8.56□□□□□ -1.04
VARS-226ENST00000483275 C20orf78Q9BR46 151 aa8.56□□□□□ -1.04
VARS-226ENST00000483275 C7orf77A4D0Y5 90 aa8.55□□□□□ -1.04
VARS-226ENST00000483275 TCAPO15273 167 aa8.55□□□□□ -1.04
VARS-226ENST00000483275 TNFRSF6BO95407 300 aa8.55□□□□□ -1.04
VARS-226ENST00000483275 S100PP25815 95 aa8.55□□□□□ -1.04
VARS-226ENST00000483275 SS18Q15532 418 aa8.55□□□□□ -1.04
VARS-226ENST00000483275 ORMDL3Q8N138 153 aa8.55□□□□□ -1.04
VARS-226ENST00000483275 TMEM18Q96B42 140 aa8.55□□□□□ -1.04
VARS-226ENST00000483275 IMMP2LQ96T52 175 aa8.55□□□□□ -1.04
VARS-226ENST00000483275 CDC42SE2Q9NRR3 84 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms