RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 LINC01551Q86U37 167 aa9.81□□□□□ -0.84
LINC01116-202ENST00000339037 STPG4Q8N801 248 aa9.81□□□□□ -0.84
LINC01116-202ENST00000339037 CHCHD10Q8WYQ3 142 aaPredicted RBP9.81□□□□□ -0.84
LINC01116-202ENST00000339037 SMIM7Q9BQ49 75 aa9.81□□□□□ -0.84
LINC01116-202ENST00000339037 EIF5A2Q9GZV4 153 aaKnown RBP9.81□□□□□ -0.84
LINC01116-202ENST00000339037 GVQW2A0A096LPI5 108 aaPredicted RBP9.8□□□□□ -0.84
LINC01116-202ENST00000339037 NCR2O95944 276 aa9.8□□□□□ -0.84
LINC01116-202ENST00000339037 APCSP02743 223 aa9.8□□□□□ -0.84
LINC01116-202ENST00000339037 AMMECR1LQ6DCA0 310 aa9.8□□□□□ -0.84
LINC01116-202ENST00000339037 TEX261Q6UWH6 196 aa9.8□□□□□ -0.84
LINC01116-202ENST00000339037 FAM210AQ96ND0 272 aa9.8□□□□□ -0.84
LINC01116-202ENST00000339037 SRP19P09132 144 aaKnown RBP9.79□□□□□ -0.84
LINC01116-202ENST00000339037 RNASEKQ6P5S7 137 aaKnown RBP9.79□□□□□ -0.84
LINC01116-202ENST00000339037 TRBV6-5A0A0K0K1A5 114 aa9.78□□□□□ -0.84
LINC01116-202ENST00000339037 FAM231BA6NCW3 169 aa9.78□□□□□ -0.84
LINC01116-202ENST00000339037 ZNF727A8MUV8 499 aa9.78□□□□□ -0.84
LINC01116-202ENST00000339037 HIGD1CA8MV81 97 aa9.78□□□□□ -0.84
LINC01116-202ENST00000339037 FGF6P10767 208 aa9.78□□□□□ -0.84
LINC01116-202ENST00000339037 TSKUQ8WUA8 353 aa9.78□□□□□ -0.84
LINC01116-202ENST00000339037 BORCS7Q96B45 105 aa9.78□□□□□ -0.84
LINC01116-202ENST00000339037 A0A096LNI7 61 aa9.77□□□□□ -0.85
LINC01116-202ENST00000339037 A0A1B0GUT8 65 aa9.77□□□□□ -0.85
LINC01116-202ENST00000339037 A0A1B0GVG6 124 aa9.77□□□□□ -0.85
LINC01116-202ENST00000339037 H7C423 109 aa9.77□□□□□ -0.85
LINC01116-202ENST00000339037 I3L3M4 83 aa9.77□□□□□ -0.85
LINC01116-202ENST00000339037 LINC00474Q9P2X8 69 aa9.77□□□□□ -0.85
LINC01116-202ENST00000339037 A0A0J9YXV3 536 aa9.76□□□□□ -0.85
LINC01116-202ENST00000339037 TSHBP01222 138 aa9.76□□□□□ -0.85
LINC01116-202ENST00000339037 PMCHP20382 165 aa9.76□□□□□ -0.85
LINC01116-202ENST00000339037 TMEM191AQ9H0A3 160 aa9.76□□□□□ -0.85
LINC01116-202ENST00000339037 OSTCQ9NRP0 149 aa9.76□□□□□ -0.85
LINC01116-202ENST00000339037 TMEM242Q9NWH2 141 aa9.76□□□□□ -0.85
LINC01116-202ENST00000339037 PKIGQ9Y2B9 76 aa9.76□□□□□ -0.85
LINC01116-202ENST00000339037 C9orf118A6NHY6 69 aa9.75□□□□□ -0.85
LINC01116-202ENST00000339037 ESDP10768 282 aa9.75□□□□□ -0.85
LINC01116-202ENST00000339037 FOXI1Q12951 378 aa9.75□□□□□ -0.85
LINC01116-202ENST00000339037 REG3GQ6UW15 175 aa9.75□□□□□ -0.85
LINC01116-202ENST00000339037 SPINK6Q6UWN8 80 aa9.75□□□□□ -0.85
LINC01116-202ENST00000339037 ST20Q9HBF5 79 aa9.75□□□□□ -0.85
LINC01116-202ENST00000339037 V9GYV3 84 aa9.75□□□□□ -0.85
LINC01116-202ENST00000339037 ZNF25P17030 456 aaPredicted RBP9.74□□□□□ -0.85
LINC01116-202ENST00000339037 RAB4AP20338 218 aa9.74□□□□□ -0.85
LINC01116-202ENST00000339037 XCL1P47992 114 aa9.74□□□□□ -0.85
LINC01116-202ENST00000339037 AMN1Q8IY45 258 aa9.74□□□□□ -0.85
LINC01116-202ENST00000339037 POLR2KP53803 58 aaKnown RBP9.73□□□□□ -0.85
LINC01116-202ENST00000339037 OR5A1Q8NGJ0 315 aa9.73□□□□□ -0.85
LINC01116-202ENST00000339037 ISOC2Q96AB3 205 aa9.73□□□□□ -0.85
LINC01116-202ENST00000339037 SMKR1H3BMG3 65 aa9.72□□□□□ -0.85
LINC01116-202ENST00000339037 NUP35Q8NFH5 326 aa9.72□□□□□ -0.85
LINC01116-202ENST00000339037 MRAP2Q96G30 205 aa9.72□□□□□ -0.85
LINC01116-202ENST00000339037 BTF3L4Q96K17 158 aa9.72□□□□□ -0.85
LINC01116-202ENST00000339037 CARD19Q96LW7 228 aa9.72□□□□□ -0.85
LINC01116-202ENST00000339037 IGHV1-58A0A0C4DH39 117 aa9.71□□□□□ -0.86
LINC01116-202ENST00000339037 TRBV27A0A0K0K1C4 114 aa9.71□□□□□ -0.86
LINC01116-202ENST00000339037 C9JQL5 133 aa9.71□□□□□ -0.86
LINC01116-202ENST00000339037 CCL25O15444 150 aa9.71□□□□□ -0.86
LINC01116-202ENST00000339037 KRTAP10-8P60410 259 aa9.71□□□□□ -0.86
LINC01116-202ENST00000339037 RPL23P62829 140 aaKnown RBP9.71□□□□□ -0.86
LINC01116-202ENST00000339037 Q6ZRP5 223 aa9.71□□□□□ -0.86
LINC01116-202ENST00000339037 LINC00526Q96FQ7 95 aa9.71□□□□□ -0.86
LINC01116-202ENST00000339037 TMEM101Q96IK0 257 aa9.71□□□□□ -0.86
LINC01116-202ENST00000339037 LINC00959A0A1B0GUT2 108 aa9.7□□□□□ -0.86
LINC01116-202ENST00000339037 RIGQ13278 110 aa9.7□□□□□ -0.86
LINC01116-202ENST00000339037 TMEM241Q24JQ0 296 aa9.7□□□□□ -0.86
LINC01116-202ENST00000339037 MRPL52Q86TS9 123 aaKnown RBP9.7□□□□□ -0.86
LINC01116-202ENST00000339037 C7orf77A4D0Y5 90 aa9.69□□□□□ -0.86
LINC01116-202ENST00000339037 ADIRFQ15847 76 aa9.69□□□□□ -0.86
LINC01116-202ENST00000339037 RNF151Q2KHN1 245 aa9.69□□□□□ -0.86
LINC01116-202ENST00000339037 NRACQ8N912 160 aa9.69□□□□□ -0.86
LINC01116-202ENST00000339037 CDC42SE2Q9NRR3 84 aa9.69□□□□□ -0.86
LINC01116-202ENST00000339037 NAT8BQ9UHF3 227 aa9.69□□□□□ -0.86
LINC01116-202ENST00000339037 SYCNQ0VAF6 134 aa9.68□□□□□ -0.86
LINC01116-202ENST00000339037 SRSF9Q13242 221 aaKnown RBP eCLIP9.68□□□□□ -0.86
LINC01116-202ENST00000339037 FAM74A3Q4VXF1 159 aa9.68□□□□□ -0.86
LINC01116-202ENST00000339037 SUMO2P61956 95 aaKnown RBP9.67□□□□□ -0.86
LINC01116-202ENST00000339037 SS18Q15532 418 aa9.67□□□□□ -0.86
LINC01116-202ENST00000339037 MRPL51Q4U2R6 128 aaKnown RBP9.67□□□□□ -0.86
LINC01116-202ENST00000339037 ZNF664Q8N3J9 261 aa9.67□□□□□ -0.86
LINC01116-202ENST00000339037 NAT8Q9UHE5 227 aa9.67□□□□□ -0.86
LINC01116-202ENST00000339037 SMIM27A0A1W2PRY6 76 aa9.66□□□□□ -0.86
LINC01116-202ENST00000339037 VCYO14598 125 aa9.66□□□□□ -0.86
LINC01116-202ENST00000339037 FCER1GP30273 86 aa9.66□□□□□ -0.86
LINC01116-202ENST00000339037 PTTG1IPP53801 180 aa9.66□□□□□ -0.86
LINC01116-202ENST00000339037 CD164L2Q6UWJ8 174 aa9.66□□□□□ -0.86
LINC01116-202ENST00000339037 CAMPP49913 170 aa9.65□□□□□ -0.86
LINC01116-202ENST00000339037 RNASE13Q5GAN3 156 aaKnown RBP9.65□□□□□ -0.86
LINC01116-202ENST00000339037 FAM104BQ5XKR9 115 aa9.65□□□□□ -0.86
LINC01116-202ENST00000339037 UBE2D4Q9Y2X8 147 aa9.65□□□□□ -0.86
LINC01116-202ENST00000339037 PPP1R17O96001 155 aa9.64□□□□□ -0.87
LINC01116-202ENST00000339037 LPAP08519 4548 aa9.64□□□□□ -0.87
LINC01116-202ENST00000339037 LOC107984640A0A0U1RRK4 108 aa9.63□□□□□ -0.87
LINC01116-202ENST00000339037 MALP21145 153 aa9.63□□□□□ -0.87
LINC01116-202ENST00000339037 GAGE2BQ13066 116 aa9.63□□□□□ -0.87
LINC01116-202ENST00000339037 PEA15Q15121 130 aa9.63□□□□□ -0.87
LINC01116-202ENST00000339037 KIR2DL4Q99706 377 aa9.63□□□□□ -0.87
LINC01116-202ENST00000339037 IGLV4-69A0A075B6H9 119 aa9.62□□□□□ -0.87
LINC01116-202ENST00000339037 PPP1R2P9O14990 202 aa9.62□□□□□ -0.87
LINC01116-202ENST00000339037 Q6ZUT4 128 aa9.62□□□□□ -0.87
LINC01116-202ENST00000339037 CSDC2Q9Y534 153 aaKnown RBP9.62□□□□□ -0.87
LINC01116-202ENST00000339037 C1orf196B1AJZ1 125 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 163.2 ms