RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 TDHQ8IZJ6 230 aa8.43□□□□□ -1.06
TCF4-213ENST00000562543 LARGE2Q8N3Y3 721 aa8.43□□□□□ -1.06
TCF4-213ENST00000562543 EFCC1Q9HA90 598 aa8.43□□□□□ -1.06
TCF4-213ENST00000562543 ERVV-2B6SEH9 535 aa8.42□□□□□ -1.06
TCF4-213ENST00000562543 NPR1P16066 1061 aa8.42□□□□□ -1.06
TCF4-213ENST00000562543 SREBF2Q12772 1141 aa8.42□□□□□ -1.06
TCF4-213ENST00000562543 CNBD1Q8NA66 436 aa8.42□□□□□ -1.06
TCF4-213ENST00000562543 CACNA1BQ00975 2339 aa8.42□□□□□ -1.06
TCF4-213ENST00000562543 MYCP01106 439 aaPredicted RBP8.41□□□□□ -1.06
TCF4-213ENST00000562543 RFC5P40937 340 aa8.41□□□□□ -1.06
TCF4-213ENST00000562543 FKBP1BP68106 108 aa8.41□□□□□ -1.06
TCF4-213ENST00000562543 ST5P78524 1137 aa8.41□□□□□ -1.06
TCF4-213ENST00000562543 FOXK2Q01167 660 aa8.41□□□□□ -1.06
TCF4-213ENST00000562543 CXCL9Q07325 125 aa8.41□□□□□ -1.06
TCF4-213ENST00000562543 NIM1KQ8IY84 436 aa8.41□□□□□ -1.06
TCF4-213ENST00000562543 DDRGK1Q96HY6 314 aa8.41□□□□□ -1.06
TCF4-213ENST00000562543 FAM161BQ96MY7 647 aa8.41□□□□□ -1.06
TCF4-213ENST00000562543 TRIM34Q9BYJ4 488 aa8.41□□□□□ -1.06
TCF4-213ENST00000562543 PTCH2Q9Y6C5 1203 aa8.41□□□□□ -1.06
TCF4-213ENST00000562543 SHTN1A0MZ66 631 aa8.4□□□□□ -1.06
TCF4-213ENST00000562543 KLRG2A4D1S0 409 aaPredicted RBP8.4□□□□□ -1.06
TCF4-213ENST00000562543 CELA2BP08218 269 aaPredicted RBP8.4□□□□□ -1.06
TCF4-213ENST00000562543 CDX2Q99626 313 aaPredicted RBP8.4□□□□□ -1.06
TCF4-213ENST00000562543 LRFN3Q9BTN0 628 aa8.4□□□□□ -1.06
TCF4-213ENST00000562543 ZBTB1Q9Y2K1 713 aa8.4□□□□□ -1.06
TCF4-213ENST00000562543 USP34Q70CQ2 3546 aa8.4□□□□□ -1.07
TCF4-213ENST00000562543 MEN1O00255 615 aa8.39□□□□□ -1.07
TCF4-213ENST00000562543 RNF144AP50876 292 aaPredicted RBP8.39□□□□□ -1.07
TCF4-213ENST00000562543 SRSF11Q05519 484 aaKnown RBP8.39□□□□□ -1.07
TCF4-213ENST00000562543 DBN1Q16643 649 aa8.39□□□□□ -1.07
TCF4-213ENST00000562543 DNAJC10Q8IXB1 793 aa8.39□□□□□ -1.07
TCF4-213ENST00000562543 CDCA5Q96FF9 252 aa8.39□□□□□ -1.07
TCF4-213ENST00000562543 ZDBF2Q9HCK1 2354 aa8.39□□□□□ -1.07
TCF4-213ENST00000562543 CYP19A1P11511 503 aaPredicted RBP8.38□□□□□ -1.07
TCF4-213ENST00000562543 RIPOR1Q6ZS17 1223 aa8.38□□□□□ -1.07
TCF4-213ENST00000562543 ZNF837Q96EG3 531 aaPredicted RBP8.38□□□□□ -1.07
TCF4-213ENST00000562543 CNOT7Q9UIV1 285 aaKnown RBP8.38□□□□□ -1.07
TCF4-213ENST00000562543 CFAP54Q96N23 3096 aa8.38□□□□□ -1.07
TCF4-213ENST00000562543 A0A1W2PRU2 124 aa8.37□□□□□ -1.07
TCF4-213ENST00000562543 ATP5J2-PTCD1G3V325 749 aa8.37□□□□□ -1.07
TCF4-213ENST00000562543 EGFRP00533 1210 aa8.37□□□□□ -1.07
TCF4-213ENST00000562543 POU4F2Q12837 409 aa8.37□□□□□ -1.07
TCF4-213ENST00000562543 RRS1Q15050 365 aaKnown RBP8.37□□□□□ -1.07
TCF4-213ENST00000562543 HSP90AB2PQ58FF8 381 aa8.37□□□□□ -1.07
TCF4-213ENST00000562543 CC2D2BQ6DHV5 1058 aa8.37□□□□□ -1.07
TCF4-213ENST00000562543 PNMA1Q8ND90 353 aa8.37□□□□□ -1.07
TCF4-213ENST00000562543 SH3TC2Q8TF17 1288 aa8.37□□□□□ -1.07
TCF4-213ENST00000562543 BCL2L13Q9BXK5 485 aa8.37□□□□□ -1.07
TCF4-213ENST00000562543 PCDHB9Q9Y5E1 797 aa8.37□□□□□ -1.07
TCF4-213ENST00000562543 DNMT3AQ9Y6K1 912 aaPredicted RBP8.37□□□□□ -1.07
TCF4-213ENST00000562543 RAB3GAP2Q9H2M9 1393 aa8.36□□□□□ -1.07
TCF4-213ENST00000562543 WASHC2AQ641Q2 1341 aa8.36□□□□□ -1.07
TCF4-213ENST00000562543 CNTNAP5Q8WYK1 1306 aa8.36□□□□□ -1.07
TCF4-213ENST00000562543 H7C1D1 291 aa8.36□□□□□ -1.07
TCF4-213ENST00000562543 GJA8P48165 433 aa8.36□□□□□ -1.07
TCF4-213ENST00000562543 MAP3K10Q02779 954 aa8.36□□□□□ -1.07
TCF4-213ENST00000562543 MOB2Q70IA6 237 aa8.36□□□□□ -1.07
TCF4-213ENST00000562543 ADAMTS19Q8TE59 1207 aa8.36□□□□□ -1.07
TCF4-213ENST00000562543 DCPSQ96C86 337 aaKnown RBP8.36□□□□□ -1.07
TCF4-213ENST00000562543 UHRF1Q96T88 793 aaPredicted RBP8.36□□□□□ -1.07
TCF4-213ENST00000562543 GAS2L1Q99501 681 aaPredicted RBP8.36□□□□□ -1.07
TCF4-213ENST00000562543 ZNRF3Q9ULT6 936 aa8.36□□□□□ -1.07
TCF4-213ENST00000562543 FLT4P35916 1363 aa8.35□□□□□ -1.07
TCF4-213ENST00000562543 NPHP1O15259 732 aa8.35□□□□□ -1.07
TCF4-213ENST00000562543 PPIP5K2O43314 1243 aa8.35□□□□□ -1.07
TCF4-213ENST00000562543 FARP2O94887 1054 aaPredicted RBP8.35□□□□□ -1.07
TCF4-213ENST00000562543 FBXO45P0C2W1 286 aa8.35□□□□□ -1.07
TCF4-213ENST00000562543 ALDH1B1P30837 517 aa8.35□□□□□ -1.07
TCF4-213ENST00000562543 MAGEA10P43363 369 aaPredicted RBP8.35□□□□□ -1.07
TCF4-213ENST00000562543 SP3Q02447 781 aa8.35□□□□□ -1.07
TCF4-213ENST00000562543 MTFR1Q15390 333 aa8.35□□□□□ -1.07
TCF4-213ENST00000562543 TRIM22Q8IYM9 498 aa8.35□□□□□ -1.07
TCF4-213ENST00000562543 GTPBP3Q969Y2 492 aaKnown RBP8.35□□□□□ -1.07
TCF4-213ENST00000562543 SCARF2Q96GP6 870 aaPredicted RBP8.35□□□□□ -1.07
TCF4-213ENST00000562543 COG3Q96JB2 828 aa8.35□□□□□ -1.07
TCF4-213ENST00000562543 ZSWIM8A7E2V4 1837 aa8.35□□□□□ -1.07
TCF4-213ENST00000562543 CHD8Q9HCK8 2581 aa8.35□□□□□ -1.07
TCF4-213ENST00000562543 KIF24Q5T7B8 1368 aa8.35□□□□□ -1.07
TCF4-213ENST00000562543 TAF1P21675 1872 aa8.34□□□□□ -1.07
TCF4-213ENST00000562543 KMT2BQ9UMN6 2715 aaPredicted RBP8.34□□□□□ -1.07
TCF4-213ENST00000562543 SCTRP47872 440 aa8.34□□□□□ -1.07
TCF4-213ENST00000562543 CABP4P57796 275 aa8.34□□□□□ -1.07
TCF4-213ENST00000562543 AOC3Q16853 763 aa8.34□□□□□ -1.07
TCF4-213ENST00000562543 TBC1D10BQ4KMP7 808 aaPredicted RBP8.34□□□□□ -1.07
TCF4-213ENST00000562543 USP38Q8NB14 1042 aa8.34□□□□□ -1.07
TCF4-213ENST00000562543 MYLIPQ8WY64 445 aa8.34□□□□□ -1.07
TCF4-213ENST00000562543 GGA3Q9NZ52 723 aa8.34□□□□□ -1.07
TCF4-213ENST00000562543 WDFY4Q6ZS81 3184 aa8.33□□□□□ -1.08
TCF4-213ENST00000562543 ZBBXA8MT70 800 aa8.33□□□□□ -1.08
TCF4-213ENST00000562543 UBE2Q2LH0YL09 131 aa8.33□□□□□ -1.08
TCF4-213ENST00000562543 IGF2BP3O00425 579 aaKnown RBP eCLIP8.33□□□□□ -1.08
TCF4-213ENST00000562543 GJB1P08034 283 aa8.33□□□□□ -1.08
TCF4-213ENST00000562543 EIF5P55010 431 aaKnown RBP8.33□□□□□ -1.08
TCF4-213ENST00000562543 CRHR2Q13324 411 aa8.33□□□□□ -1.08
TCF4-213ENST00000562543 KANK3Q6NY19 840 aa8.33□□□□□ -1.08
TCF4-213ENST00000562543 HDGFL2Q7Z4V5 671 aaPredicted RBP8.33□□□□□ -1.08
TCF4-213ENST00000562543 SLC51AQ86UW1 340 aa8.33□□□□□ -1.08
TCF4-213ENST00000562543 SETDB2Q96T68 719 aa8.33□□□□□ -1.08
TCF4-213ENST00000562543 VPS33BQ9H267 617 aa8.33□□□□□ -1.08
TCF4-213ENST00000562543 MBIPQ9NS73 344 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms