RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-231ENST00000544639 SYNGAP1Q96PV0 1343 aa6.95□□□□□ -1.3
RAP1B-231ENST00000544639 EIF4A3P38919 411 aaKnown RBP6.94□□□□□ -1.3
RAP1B-231ENST00000544639 FAM160A1Q05DH4 1040 aa6.94□□□□□ -1.3
RAP1B-231ENST00000544639 PRR23CQ6ZRP0 262 aa6.94□□□□□ -1.3
RAP1B-231ENST00000544639 ZNF654Q8IZM8 581 aa6.94□□□□□ -1.3
RAP1B-231ENST00000544639 SMG8Q8ND04 991 aaKnown RBP6.94□□□□□ -1.3
RAP1B-231ENST00000544639 ACSBG1Q96GR2 724 aa6.94□□□□□ -1.3
RAP1B-231ENST00000544639 CYP4F12Q9HCS2 524 aa6.94□□□□□ -1.3
RAP1B-231ENST00000544639 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.94□□□□□ -1.3
RAP1B-231ENST00000544639 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.93□□□□□ -1.3
RAP1B-231ENST00000544639 TIAF1O95411 115 aa6.93□□□□□ -1.3
RAP1B-231ENST00000544639 SNAP47Q5SQN1 464 aa6.93□□□□□ -1.3
RAP1B-231ENST00000544639 NUTM2GQ5VZR2 741 aa6.93□□□□□ -1.3
RAP1B-231ENST00000544639 ANKRD34AQ69YU3 496 aa6.93□□□□□ -1.3
RAP1B-231ENST00000544639 FBXL19Q6PCT2 694 aa6.93□□□□□ -1.3
RAP1B-231ENST00000544639 BNC2Q6ZN30 1099 aaPredicted RBP6.93□□□□□ -1.3
RAP1B-231ENST00000544639 GOLM1Q8NBJ4 401 aa6.93□□□□□ -1.3
RAP1B-231ENST00000544639 RAD18Q9NS91 495 aa6.93□□□□□ -1.3
RAP1B-231ENST00000544639 FAM221AA4D161 298 aa6.92□□□□□ -1.3
RAP1B-231ENST00000544639 TMPRSS2O15393 492 aa6.92□□□□□ -1.3
RAP1B-231ENST00000544639 GREM1O60565 184 aa6.92□□□□□ -1.3
RAP1B-231ENST00000544639 F13A1P00488 732 aa6.92□□□□□ -1.3
RAP1B-231ENST00000544639 ADH5P11766 374 aa6.92□□□□□ -1.3
RAP1B-231ENST00000544639 GLB1P16278 677 aa6.92□□□□□ -1.3
RAP1B-231ENST00000544639 AKAP4Q5JQC9 854 aa6.92□□□□□ -1.3
RAP1B-231ENST00000544639 FDX2Q6P4F2 183 aa6.92□□□□□ -1.3
RAP1B-231ENST00000544639 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.92□□□□□ -1.3
RAP1B-231ENST00000544639 KIAA0825Q8IV33 1275 aa6.92□□□□□ -1.3
RAP1B-231ENST00000544639 ZNF296Q8WUU4 475 aaPredicted RBP6.92□□□□□ -1.3
RAP1B-231ENST00000544639 GATAD2BQ8WXI9 593 aa6.92□□□□□ -1.3
RAP1B-231ENST00000544639 SPON2Q9BUD6 331 aa6.92□□□□□ -1.3
RAP1B-231ENST00000544639 CCSER2Q9H7U1 834 aa6.92□□□□□ -1.3
RAP1B-231ENST00000544639 PCDHA4Q9UN74 947 aa6.92□□□□□ -1.3
RAP1B-231ENST00000544639 SUPT16HQ9Y5B9 1047 aaKnown RBP6.92□□□□□ -1.3
RAP1B-231ENST00000544639 CILPO75339 1184 aa6.91□□□□□ -1.3
RAP1B-231ENST00000544639 SLFN14P0C7P3 912 aa6.91□□□□□ -1.3
RAP1B-231ENST00000544639 PREPP48147 710 aa6.91□□□□□ -1.3
RAP1B-231ENST00000544639 SOX4Q06945 474 aaPredicted RBP6.91□□□□□ -1.3
RAP1B-231ENST00000544639 ZC3H12AQ5D1E8 599 aaKnown RBP6.91□□□□□ -1.3
RAP1B-231ENST00000544639 FAM196AQ6ZSG2 479 aa6.91□□□□□ -1.3
RAP1B-231ENST00000544639 JARID2Q92833 1246 aaPredicted RBP6.91□□□□□ -1.3
RAP1B-231ENST00000544639 CEP41Q9BYV8 373 aa6.91□□□□□ -1.3
RAP1B-231ENST00000544639 ACBD3Q9H3P7 528 aa6.91□□□□□ -1.3
RAP1B-231ENST00000544639 PPP1R9AQ9ULJ8 1098 aa6.91□□□□□ -1.3
RAP1B-231ENST00000544639 DRD2P14416 443 aa6.9□□□□□ -1.3
RAP1B-231ENST00000544639 CDK8P49336 464 aa6.9□□□□□ -1.3
RAP1B-231ENST00000544639 ID3Q02535 119 aa6.9□□□□□ -1.3
RAP1B-231ENST00000544639 LRFN4Q6PJG9 635 aa6.9□□□□□ -1.3
RAP1B-231ENST00000544639 C12orf50Q8NA57 414 aaPredicted RBP6.9□□□□□ -1.3
RAP1B-231ENST00000544639 C2CD4AQ8NCU7 369 aaPredicted RBP6.9□□□□□ -1.3
RAP1B-231ENST00000544639 UBL7Q96S82 380 aaPredicted RBP6.9□□□□□ -1.3
RAP1B-231ENST00000544639 NT5C1AQ9BXI3 368 aa6.9□□□□□ -1.3
RAP1B-231ENST00000544639 LRRC3Q9BY71 257 aa6.9□□□□□ -1.3
RAP1B-231ENST00000544639 CRIM1Q9NZV1 1036 aa6.9□□□□□ -1.3
RAP1B-231ENST00000544639 AP4E1Q9UPM8 1137 aa6.9□□□□□ -1.3
RAP1B-231ENST00000544639 KRTAP9-6A0A140TA67 174 aa6.89□□□□□ -1.31
RAP1B-231ENST00000544639 TNNI2P48788 182 aa6.89□□□□□ -1.31
RAP1B-231ENST00000544639 RPL6Q02878 288 aaKnown RBP6.89□□□□□ -1.31
RAP1B-231ENST00000544639 PAK2Q13177 524 aa6.89□□□□□ -1.31
RAP1B-231ENST00000544639 INPP5AQ14642 412 aa6.89□□□□□ -1.31
RAP1B-231ENST00000544639 WIPI1Q5MNZ9 446 aaPredicted RBP6.89□□□□□ -1.31
RAP1B-231ENST00000544639 PLPPR2Q96GM1 343 aa6.89□□□□□ -1.31
RAP1B-231ENST00000544639 FAM46AQ96IP4 442 aaKnown RBP6.89□□□□□ -1.31
RAP1B-231ENST00000544639 EAF1Q96JC9 268 aaPredicted RBP6.89□□□□□ -1.31
RAP1B-231ENST00000544639 GSX1Q9H4S2 264 aaPredicted RBP6.89□□□□□ -1.31
RAP1B-231ENST00000544639 ROBO2Q9HCK4 1378 aa6.89□□□□□ -1.31
RAP1B-231ENST00000544639 DCDC2CA8MYV0 355 aa6.88□□□□□ -1.31
RAP1B-231ENST00000544639 CRKP46108 304 aa6.88□□□□□ -1.31
RAP1B-231ENST00000544639 GJA8P48165 433 aa6.88□□□□□ -1.31
RAP1B-231ENST00000544639 ERVK-24P63145 666 aa6.88□□□□□ -1.31
RAP1B-231ENST00000544639 RING1Q06587 406 aa6.88□□□□□ -1.31
RAP1B-231ENST00000544639 MPP2Q14168 576 aa6.88□□□□□ -1.31
RAP1B-231ENST00000544639 DIEXFQ68CQ4 756 aaKnown RBP6.88□□□□□ -1.31
RAP1B-231ENST00000544639 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.88□□□□□ -1.31
RAP1B-231ENST00000544639 HDXQ7Z353 690 aa6.88□□□□□ -1.31
RAP1B-231ENST00000544639 FBXO27Q8NI29 283 aa6.88□□□□□ -1.31
RAP1B-231ENST00000544639 ELMO3Q96BJ8 720 aa6.88□□□□□ -1.31
RAP1B-231ENST00000544639 FANCD2OSQ96PS1 177 aa6.88□□□□□ -1.31
RAP1B-231ENST00000544639 UBP1Q9NZI7 540 aa6.88□□□□□ -1.31
RAP1B-231ENST00000544639 ACTL7BQ9Y614 415 aa6.88□□□□□ -1.31
RAP1B-231ENST00000544639 SNCAIPQ9Y6H5 919 aa6.88□□□□□ -1.31
RAP1B-231ENST00000544639 GFRA2O00451 464 aa6.87□□□□□ -1.31
RAP1B-231ENST00000544639 TLR3O15455 904 aaKnown RBP6.87□□□□□ -1.31
RAP1B-231ENST00000544639 SART1O43290 800 aaKnown RBP6.87□□□□□ -1.31
RAP1B-231ENST00000544639 BPNT1O95861 308 aa6.87□□□□□ -1.31
RAP1B-231ENST00000544639 FSTP19883 344 aa6.87□□□□□ -1.31
RAP1B-231ENST00000544639 ZC3H6P61129 1189 aaKnown RBP6.87□□□□□ -1.31
RAP1B-231ENST00000544639 APOBRQ0VD83 1088 aa6.87□□□□□ -1.31
RAP1B-231ENST00000544639 UVSSAQ2YD98 709 aa6.87□□□□□ -1.31
RAP1B-231ENST00000544639 CYFIP1Q7L576 1253 aa6.87□□□□□ -1.31
RAP1B-231ENST00000544639 DYMQ7RTS9 669 aa6.87□□□□□ -1.31
RAP1B-231ENST00000544639 REC114Q7Z4M0 266 aa6.87□□□□□ -1.31
RAP1B-231ENST00000544639 RASGRP4Q8TDF6 673 aa6.87□□□□□ -1.31
RAP1B-231ENST00000544639 GPRASP2Q96D09 838 aa6.87□□□□□ -1.31
RAP1B-231ENST00000544639 TINF2Q9BSI4 451 aa6.87□□□□□ -1.31
RAP1B-231ENST00000544639 ATXN3LQ9H3M9 355 aa6.87□□□□□ -1.31
RAP1B-231ENST00000544639 DISC1Q9NRI5 854 aa6.87□□□□□ -1.31
RAP1B-231ENST00000544639 INPP5FQ9Y2H2 1132 aa6.87□□□□□ -1.31
RAP1B-231ENST00000544639 HIF3AQ9Y2N7 669 aa6.87□□□□□ -1.31
RAP1B-231ENST00000544639 CSADQ9Y600 493 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms