RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	VEZT	Q9HBM0	779 aa		13.21	□□□□□ -0.29
CDK11A-222	ENST00000498810	GNL3L	Q9NVN8	582 aa	Known RBP	13.21	□□□□□ -0.29
CDK11A-222	ENST00000498810	TTF2	Q9UNY4	1162 aa	Known RBP	13.21	□□□□□ -0.29
CDK11A-222	ENST00000498810	SCAF8	Q9UPN6	1271 aa	Known RBP	13.21	□□□□□ -0.29
CDK11A-222	ENST00000498810	PA2G4	Q9UQ80	394 aa	Known RBP	13.21	□□□□□ -0.29
CDK11A-222	ENST00000498810	AK9	Q5TCS8	1911 aa		13.21	□□□□□ -0.3
CDK11A-222	ENST00000498810	AKAP11	Q9UKA4	1901 aa		13.21	□□□□□ -0.3
CDK11A-222	ENST00000498810	MAST3	O60307	1309 aa		13.2	□□□□□ -0.3
CDK11A-222	ENST00000498810	MS4A1	P11836	297 aa		13.2	□□□□□ -0.3
CDK11A-222	ENST00000498810	RFX5	P48382	616 aa	Predicted RBP	13.2	□□□□□ -0.3
CDK11A-222	ENST00000498810	MAP2K1	Q02750	393 aa	Predicted RBP	13.2	□□□□□ -0.3
CDK11A-222	ENST00000498810	CFAP100	Q494V2	611 aa		13.2	□□□□□ -0.3
CDK11A-222	ENST00000498810	DLK2	Q6UY11	383 aa		13.2	□□□□□ -0.3
CDK11A-222	ENST00000498810	CERS5	Q8N5B7	392 aa		13.2	□□□□□ -0.3
CDK11A-222	ENST00000498810	VGLL2	Q8N8G2	317 aa		13.2	□□□□□ -0.3
CDK11A-222	ENST00000498810	TDRD7	Q8NHU6	1098 aa	Known RBP	13.2	□□□□□ -0.3
CDK11A-222	ENST00000498810	COL1A1	P02452	1464 aa	Predicted RBP	13.2	□□□□□ -0.3
CDK11A-222	ENST00000498810	FAM205A	Q6ZU69	1335 aa		13.19	□□□□□ -0.3
CDK11A-222	ENST00000498810	CLRN2	A0PK11	232 aa		13.19	□□□□□ -0.3
CDK11A-222	ENST00000498810	ZNF157	P51786	506 aa	Predicted RBP	13.18	□□□□□ -0.3
CDK11A-222	ENST00000498810	PPP4C	P60510	307 aa		13.18	□□□□□ -0.3
CDK11A-222	ENST00000498810	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
CDK11A-222	ENST00000498810	GORAB	Q5T7V8	394 aa		13.18	□□□□□ -0.3
CDK11A-222	ENST00000498810	RGMB	Q6NW40	437 aa		13.18	□□□□□ -0.3
CDK11A-222	ENST00000498810	ATG9A	Q7Z3C6	839 aa		13.18	□□□□□ -0.3
CDK11A-222	ENST00000498810	HHIPL1	Q96JK4	782 aa		13.18	□□□□□ -0.3
CDK11A-222	ENST00000498810	COPRS	Q9NQ92	184 aa		13.18	□□□□□ -0.3
CDK11A-222	ENST00000498810	TMOD2	Q9NZR1	351 aa		13.18	□□□□□ -0.3
CDK11A-222	ENST00000498810	AKAP2	Q9Y2D5	859 aa		13.18	□□□□□ -0.3
CDK11A-222	ENST00000498810	AOC2	O75106	756 aa		13.17	□□□□□ -0.3
CDK11A-222	ENST00000498810	NOG	Q13253	232 aa		13.17	□□□□□ -0.3
CDK11A-222	ENST00000498810	TNFAIP1	Q13829	316 aa		13.17	□□□□□ -0.3
CDK11A-222	ENST00000498810	PRKG1	Q13976	671 aa		13.17	□□□□□ -0.3
CDK11A-222	ENST00000498810	FBXO33	Q7Z6M2	555 aa		13.17	□□□□□ -0.3
CDK11A-222	ENST00000498810	C1orf115	Q9H7X2	142 aa		13.17	□□□□□ -0.3
CDK11A-222	ENST00000498810	MYH2	Q9UKX2	1941 aa		13.17	□□□□□ -0.3
CDK11A-222	ENST00000498810	FGFR2	P21802	821 aa		13.16	□□□□□ -0.3
CDK11A-222	ENST00000498810	TNNI2	P48788	182 aa		13.16	□□□□□ -0.3
CDK11A-222	ENST00000498810	CTCF	P49711	727 aa	Predicted RBP	13.16	□□□□□ -0.3
CDK11A-222	ENST00000498810	FKBP1B	P68106	108 aa		13.16	□□□□□ -0.3
CDK11A-222	ENST00000498810	MTX1	Q13505	466 aa		13.16	□□□□□ -0.3
CDK11A-222	ENST00000498810	PRAMEF18	Q5VWM3	479 aa		13.16	□□□□□ -0.3
CDK11A-222	ENST00000498810	ARMC9	Q7Z3E5	817 aa		13.16	□□□□□ -0.3
CDK11A-222	ENST00000498810	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.16	□□□□□ -0.3
CDK11A-222	ENST00000498810	WDR66	Q8TBY9	1149 aa		13.16	□□□□□ -0.3
CDK11A-222	ENST00000498810	TEKT1	Q969V4	418 aa		13.16	□□□□□ -0.3
CDK11A-222	ENST00000498810	NEUROD6	Q96NK8	337 aa		13.16	□□□□□ -0.3
CDK11A-222	ENST00000498810	SERPINA10	Q9UK55	444 aa		13.16	□□□□□ -0.3
CDK11A-222	ENST00000498810	FOXN1	O15353	648 aa		13.15	□□□□□ -0.3
CDK11A-222	ENST00000498810	MAP2K2	P36507	400 aa		13.15	□□□□□ -0.3
CDK11A-222	ENST00000498810	CRK	P46108	304 aa		13.15	□□□□□ -0.3
CDK11A-222	ENST00000498810	TFCP2	Q12800	502 aa		13.15	□□□□□ -0.3
CDK11A-222	ENST00000498810	MVP	Q14764	893 aa	Known RBP	13.15	□□□□□ -0.3
CDK11A-222	ENST00000498810	MTMR14	Q8NCE2	650 aa		13.15	□□□□□ -0.3
CDK11A-222	ENST00000498810	CCDC102A	Q96A19	550 aa		13.15	□□□□□ -0.3
CDK11A-222	ENST00000498810	RCAN3	Q9UKA8	241 aa		13.15	□□□□□ -0.3
CDK11A-222	ENST00000498810	PPP2R3B	Q9Y5P8	575 aa		13.15	□□□□□ -0.3
CDK11A-222	ENST00000498810	PNMA6E	A0A0J9YXQ4	647 aa		13.14	□□□□□ -0.31
CDK11A-222	ENST00000498810		A0A1B0GUL7	405 aa		13.14	□□□□□ -0.31
CDK11A-222	ENST00000498810	ZGPAT	Q8N5A5	531 aa	Known RBP	13.14	□□□□□ -0.31
CDK11A-222	ENST00000498810	PANK1	Q8TE04	598 aa		13.14	□□□□□ -0.31
CDK11A-222	ENST00000498810	DEFB129	Q9H1M3	183 aa		13.14	□□□□□ -0.31
CDK11A-222	ENST00000498810	DENND2A	Q9ULE3	1009 aa		13.14	□□□□□ -0.31
CDK11A-222	ENST00000498810	PCDHAC2	Q9Y5I4	1007 aa		13.14	□□□□□ -0.31
CDK11A-222	ENST00000498810	OTOF	Q9HC10	1997 aa		13.14	□□□□□ -0.31
CDK11A-222	ENST00000498810	MAST2	Q6P0Q8	1798 aa		13.13	□□□□□ -0.31
CDK11A-222	ENST00000498810	TCP10L2	B9ZVM9	353 aa		13.13	□□□□□ -0.31
CDK11A-222	ENST00000498810	PPP1R12B	O60237	982 aa	Predicted RBP	13.13	□□□□□ -0.31
CDK11A-222	ENST00000498810	LDHB	P07195	334 aa	Known RBP	13.13	□□□□□ -0.31
CDK11A-222	ENST00000498810	RLBP1	P12271	317 aa		13.13	□□□□□ -0.31
CDK11A-222	ENST00000498810	ADORA1	P30542	326 aa		13.13	□□□□□ -0.31
CDK11A-222	ENST00000498810	PHKA1	P46020	1223 aa		13.13	□□□□□ -0.31
CDK11A-222	ENST00000498810	SUPT20HL1	Q3ZLR7	823 aa		13.13	□□□□□ -0.31
CDK11A-222	ENST00000498810	DZIP1	Q86YF9	867 aa	Known RBP	13.13	□□□□□ -0.31
CDK11A-222	ENST00000498810	TNS4	Q8IZW8	715 aa		13.13	□□□□□ -0.31
CDK11A-222	ENST00000498810	PRMT6	Q96LA8	375 aa	Predicted RBP	13.13	□□□□□ -0.31
CDK11A-222	ENST00000498810	YTHDC1	Q96MU7	727 aa	Known RBP	13.13	□□□□□ -0.31
CDK11A-222	ENST00000498810	CHMP4B	Q9H444	224 aa	Known RBP	13.13	□□□□□ -0.31
CDK11A-222	ENST00000498810	TDRD3	Q9H7E2	651 aa	Known RBP	13.13	□□□□□ -0.31
CDK11A-222	ENST00000498810	ANGEL1	Q9UNK9	670 aa	Known RBP	13.13	□□□□□ -0.31
CDK11A-222	ENST00000498810	SUGT1	Q9Y2Z0	365 aa		13.13	□□□□□ -0.31
CDK11A-222	ENST00000498810	PCNT	O95613	3336 aa		13.13	□□□□□ -0.31
CDK11A-222	ENST00000498810	DOCK2	Q92608	1830 aa		13.12	□□□□□ -0.31
CDK11A-222	ENST00000498810	UBE2Q2L	H0YL09	131 aa		13.12	□□□□□ -0.31
CDK11A-222	ENST00000498810	CA12	O43570	354 aa		13.12	□□□□□ -0.31
CDK11A-222	ENST00000498810	SURF6	O75683	361 aa	Known RBP	13.12	□□□□□ -0.31
CDK11A-222	ENST00000498810	SLC10A3	P09131	477 aa		13.12	□□□□□ -0.31
CDK11A-222	ENST00000498810	SWT1	Q5T5J6	900 aa	Known RBP	13.12	□□□□□ -0.31
CDK11A-222	ENST00000498810	CCDC102B	Q68D86	513 aa		13.12	□□□□□ -0.31
CDK11A-222	ENST00000498810	SMYD5	Q6GMV2	418 aa		13.12	□□□□□ -0.31
CDK11A-222	ENST00000498810	MOB2	Q70IA6	237 aa		13.12	□□□□□ -0.31
CDK11A-222	ENST00000498810	ZBED3	Q96IU2	234 aa	Predicted RBP	13.12	□□□□□ -0.31
CDK11A-222	ENST00000498810	ZNF70	Q9UC06	446 aa	Predicted RBP	13.12	□□□□□ -0.31
CDK11A-222	ENST00000498810	ABCF2	Q9UG63	623 aa		13.12	□□□□□ -0.31
CDK11A-222	ENST00000498810	ADGRG1	Q9Y653	693 aa		13.12	□□□□□ -0.31
CDK11A-222	ENST00000498810	IREB2	P48200	963 aa	Known RBP	13.11	□□□□□ -0.31
CDK11A-222	ENST00000498810	LBX1	P52954	281 aa		13.11	□□□□□ -0.31
CDK11A-222	ENST00000498810	TIMM10	P62072	90 aa		13.11	□□□□□ -0.31
CDK11A-222	ENST00000498810	HDLBP	Q00341	1268 aa	Known RBP	13.11	□□□□□ -0.31
CDK11A-222	ENST00000498810	RASA3	Q14644	834 aa		13.11	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms