RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 USP17L12C9JPN9 530 aa17.12■□□□□ 0.33
TRIM23-202ENST00000274327 USP17L21D6R901 530 aa17.12■□□□□ 0.33
TRIM23-202ENST00000274327 ECE2O60344 883 aa17.12■□□□□ 0.33
TRIM23-202ENST00000274327 PCP11498 1178 aaKnown RBP17.12■□□□□ 0.33
TRIM23-202ENST00000274327 PDIA3P30101 505 aaKnown RBP17.12■□□□□ 0.33
TRIM23-202ENST00000274327 RTKN2Q8IZC4 609 aa17.12■□□□□ 0.33
TRIM23-202ENST00000274327 FBXW7Q969H0 707 aa17.12■□□□□ 0.33
TRIM23-202ENST00000274327 PSMD1Q99460 953 aa17.12■□□□□ 0.33
TRIM23-202ENST00000274327 MTA3Q9BTC8 594 aa17.12■□□□□ 0.33
TRIM23-202ENST00000274327 ZSWIM5Q9P217 1185 aa17.12■□□□□ 0.33
TRIM23-202ENST00000274327 CYP2D7A0A087X1C5 515 aa17.11■□□□□ 0.33
TRIM23-202ENST00000274327 SMIM22K7EJ46 135 aa17.11■□□□□ 0.33
TRIM23-202ENST00000274327 AOC3Q16853 763 aa17.11■□□□□ 0.33
TRIM23-202ENST00000274327 STRIP1Q5VSL9 837 aa17.11■□□□□ 0.33
TRIM23-202ENST00000274327 IGDCC4Q8TDY8 1250 aa17.11■□□□□ 0.33
TRIM23-202ENST00000274327 ANGEL1Q9UNK9 670 aaKnown RBP17.11■□□□□ 0.33
TRIM23-202ENST00000274327 KDM4AO75164 1064 aa17.1■□□□□ 0.33
TRIM23-202ENST00000274327 PLCG2P16885 1265 aa17.1■□□□□ 0.33
TRIM23-202ENST00000274327 RHBDL3P58872 404 aa17.1■□□□□ 0.33
TRIM23-202ENST00000274327 GBP4Q96PP9 640 aa17.1■□□□□ 0.33
TRIM23-202ENST00000274327 LLPHQ9BRT6 129 aaKnown RBP17.1■□□□□ 0.33
TRIM23-202ENST00000274327 MXD3Q9BW11 206 aa17.1■□□□□ 0.33
TRIM23-202ENST00000274327 KCNQ5Q9NR82 932 aa17.1■□□□□ 0.33
TRIM23-202ENST00000274327 BRPF3Q9ULD4 1205 aa17.1■□□□□ 0.33
TRIM23-202ENST00000274327 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.1■□□□□ 0.33
TRIM23-202ENST00000274327 DAGLAQ9Y4D2 1042 aa17.1■□□□□ 0.33
TRIM23-202ENST00000274327 USP5P45974 858 aa17.1■□□□□ 0.33
TRIM23-202ENST00000274327 DACT2Q5SW24 774 aa17.1■□□□□ 0.33
TRIM23-202ENST00000274327 SMARCC2Q8TAQ2 1214 aa17.1■□□□□ 0.33
TRIM23-202ENST00000274327 PIM2Q9P1W9 311 aa17.1■□□□□ 0.33
TRIM23-202ENST00000274327 ADAMTSL1Q8N6G6 1762 aa17.09■□□□□ 0.33
TRIM23-202ENST00000274327 WDR33Q9C0J8 1336 aaKnown RBP17.09■□□□□ 0.33
TRIM23-202ENST00000274327 KLF18A0A0U1RQI7 1052 aa17.09■□□□□ 0.33
TRIM23-202ENST00000274327 SYT1P21579 422 aa17.09■□□□□ 0.33
TRIM23-202ENST00000274327 LIFRP42702 1097 aa17.09■□□□□ 0.33
TRIM23-202ENST00000274327 SGMS1Q86VZ5 419 aa17.09■□□□□ 0.33
TRIM23-202ENST00000274327 CHMP4CQ96CF2 233 aa17.09■□□□□ 0.33
TRIM23-202ENST00000274327 LY9Q9HBG7 655 aa17.09■□□□□ 0.33
TRIM23-202ENST00000274327 TTF2Q9UNY4 1162 aaKnown RBP17.09■□□□□ 0.33
TRIM23-202ENST00000274327 MYH1P12882 1939 aa17.08■□□□□ 0.33
TRIM23-202ENST00000274327 ROBO3Q96MS0 1386 aa17.08■□□□□ 0.33
TRIM23-202ENST00000274327 PPIP5K2O43314 1243 aa17.08■□□□□ 0.33
TRIM23-202ENST00000274327 ORC4O43929 436 aa17.08■□□□□ 0.33
TRIM23-202ENST00000274327 BAG4O95429 457 aaKnown RBP17.08■□□□□ 0.33
TRIM23-202ENST00000274327 CTDNEP1O95476 244 aa17.08■□□□□ 0.33
TRIM23-202ENST00000274327 CYP2D6P10635 497 aa17.08■□□□□ 0.33
TRIM23-202ENST00000274327 SOGA3Q5TF21 947 aa17.08■□□□□ 0.33
TRIM23-202ENST00000274327 C12orf60Q5U649 245 aa17.08■□□□□ 0.33
TRIM23-202ENST00000274327 HHIPL2Q6UWX4 724 aa17.08■□□□□ 0.33
TRIM23-202ENST00000274327 TGFBRAP1Q8WUH2 860 aa17.08■□□□□ 0.33
TRIM23-202ENST00000274327 VPS33BQ9H267 617 aa17.08■□□□□ 0.33
TRIM23-202ENST00000274327 MCM9Q9NXL9 1143 aa17.08■□□□□ 0.33
TRIM23-202ENST00000274327 HPS5Q9UPZ3 1129 aa17.08■□□□□ 0.33
TRIM23-202ENST00000274327 ECM29Q5VYK3 1845 aa17.08■□□□□ 0.32
TRIM23-202ENST00000274327 USP17L3A6NCW0 530 aa17.07■□□□□ 0.32
TRIM23-202ENST00000274327 USP17L4A6NCW7 530 aa17.07■□□□□ 0.32
TRIM23-202ENST00000274327 STX6O43752 255 aa17.07■□□□□ 0.32
TRIM23-202ENST00000274327 USP17L8P0C7I0 530 aa17.07■□□□□ 0.32
TRIM23-202ENST00000274327 EVX2Q03828 476 aa17.07■□□□□ 0.32
TRIM23-202ENST00000274327 RRP12Q5JTH9 1297 aaKnown RBP17.07■□□□□ 0.32
TRIM23-202ENST00000274327 USP17L1Q7RTZ2 530 aa17.07■□□□□ 0.32
TRIM23-202ENST00000274327 TEX11Q8IYF3 940 aa17.07■□□□□ 0.32
TRIM23-202ENST00000274327 STK11IPQ8N1F8 1099 aa17.07■□□□□ 0.32
TRIM23-202ENST00000274327 NSUN7Q8NE18 718 aaKnown RBP17.07■□□□□ 0.32
TRIM23-202ENST00000274327 ESR2Q92731 530 aa17.07■□□□□ 0.32
TRIM23-202ENST00000274327 MRIQ9BWK5 157 aa17.07■□□□□ 0.32
TRIM23-202ENST00000274327 FER1L6Q2WGJ9 1857 aa17.07■□□□□ 0.32
TRIM23-202ENST00000274327 F8W031 263 aaPredicted RBP17.07■□□□□ 0.32
TRIM23-202ENST00000274327 JAK2O60674 1132 aa17.07■□□□□ 0.32
TRIM23-202ENST00000274327 DTNBO60941 627 aa17.07■□□□□ 0.32
TRIM23-202ENST00000274327 PDIA4P13667 645 aaKnown RBP17.07■□□□□ 0.32
TRIM23-202ENST00000274327 CCT2P78371 535 aaKnown RBP17.07■□□□□ 0.32
TRIM23-202ENST00000274327 TMEM67Q5HYA8 995 aa17.07■□□□□ 0.32
TRIM23-202ENST00000274327 SENP2Q9HC62 589 aa17.07■□□□□ 0.32
TRIM23-202ENST00000274327 TOMM22Q9NS69 142 aa17.07■□□□□ 0.32
TRIM23-202ENST00000274327 CD2APQ9Y5K6 639 aa17.07■□□□□ 0.32
TRIM23-202ENST00000274327 YDJCA8MPS7 323 aa17.06■□□□□ 0.32
TRIM23-202ENST00000274327 IFIT3O14879 490 aaKnown RBP17.06■□□□□ 0.32
TRIM23-202ENST00000274327 SLC3A2P08195 630 aaKnown RBP17.06■□□□□ 0.32
TRIM23-202ENST00000274327 PTGER2P43116 358 aa17.06■□□□□ 0.32
TRIM23-202ENST00000274327 NT5C2P49902 561 aa17.06■□□□□ 0.32
TRIM23-202ENST00000274327 MTMR6Q9Y217 621 aa17.06■□□□□ 0.32
TRIM23-202ENST00000274327 FLT1P17948 1338 aa17.06■□□□□ 0.32
TRIM23-202ENST00000274327 COL4A5P29400 1685 aa17.05■□□□□ 0.32
TRIM23-202ENST00000274327 DDX11L8A8MPP1 907 aa17.05■□□□□ 0.32
TRIM23-202ENST00000274327 GOLGA8BA8MQT2 603 aa17.05■□□□□ 0.32
TRIM23-202ENST00000274327 ZSCAN22P10073 491 aaPredicted RBP17.05■□□□□ 0.32
TRIM23-202ENST00000274327 HDLBPQ00341 1268 aaKnown RBP17.05■□□□□ 0.32
TRIM23-202ENST00000274327 MAPKAPK5Q8IW41 473 aa17.05■□□□□ 0.32
TRIM23-202ENST00000274327 NCOA5Q9HCD5 579 aaKnown RBP17.05■□□□□ 0.32
TRIM23-202ENST00000274327 NAP1L2Q9ULW6 460 aaPredicted RBP17.05■□□□□ 0.32
TRIM23-202ENST00000274327 NID2Q14112 1375 aa17.05■□□□□ 0.32
TRIM23-202ENST00000274327 PSDA5PKW4 1024 aaPredicted RBP17.05■□□□□ 0.32
TRIM23-202ENST00000274327 PDCP20941 246 aa17.05■□□□□ 0.32
TRIM23-202ENST00000274327 HMGN5P82970 282 aaKnown RBP17.05■□□□□ 0.32
TRIM23-202ENST00000274327 SART3Q15020 963 aaKnown RBP17.05■□□□□ 0.32
TRIM23-202ENST00000274327 SEC23AQ15436 765 aa17.05■□□□□ 0.32
TRIM23-202ENST00000274327 DALRD3Q5D0E6 543 aaKnown RBP17.05■□□□□ 0.32
TRIM23-202ENST00000274327 APOA5Q6Q788 366 aa17.05■□□□□ 0.32
TRIM23-202ENST00000274327 TEKT1Q969V4 418 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms