RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 AMTP48728 403 aa10.13□□□□□ -0.79
TRIM3-212ENST00000533064 CFAP126Q5VTH2 177 aa10.13□□□□□ -0.79
TRIM3-212ENST00000533064 CELA1Q9UNI1 258 aa10.13□□□□□ -0.79
TRIM3-212ENST00000533064 CIDEAO60543 219 aa10.12□□□□□ -0.79
TRIM3-212ENST00000533064 NPYP01303 97 aa10.12□□□□□ -0.79
TRIM3-212ENST00000533064 MGPP08493 103 aa10.12□□□□□ -0.79
TRIM3-212ENST00000533064 LINC00612Q8N6U2 182 aa10.12□□□□□ -0.79
TRIM3-212ENST00000533064 POM121L12Q8N7R1 296 aa10.12□□□□□ -0.79
TRIM3-212ENST00000533064 F5H697 171 aa10.12□□□□□ -0.79
TRIM3-212ENST00000533064 PMCHP20382 165 aa10.12□□□□□ -0.79
TRIM3-212ENST00000533064 ZNF56Q15929 161 aa10.12□□□□□ -0.79
TRIM3-212ENST00000533064 ZFP2Q6ZN57 461 aa10.12□□□□□ -0.79
TRIM3-212ENST00000533064 PRSS3P2Q8NHM4 247 aa10.12□□□□□ -0.79
TRIM3-212ENST00000533064 C18orf15Q96N68 181 aa10.12□□□□□ -0.79
TRIM3-212ENST00000533064 KIF25-AS1Q9Y6Z4 181 aa10.12□□□□□ -0.79
TRIM3-212ENST00000533064 TNFRSF6BO95407 300 aa10.11□□□□□ -0.79
TRIM3-212ENST00000533064 IGHV3-53P01767 116 aa10.11□□□□□ -0.79
TRIM3-212ENST00000533064 CRYGDP07320 174 aa10.11□□□□□ -0.79
TRIM3-212ENST00000533064 C11orf45Q8TAV5 145 aa10.11□□□□□ -0.79
TRIM3-212ENST00000533064 MAP1LC3AQ9H492 121 aa10.11□□□□□ -0.79
TRIM3-212ENST00000533064 IGHV3-73A0A0B4J1V6 119 aa10.1□□□□□ -0.79
TRIM3-212ENST00000533064 GAS8-AS1O95177 125 aa10.1□□□□□ -0.79
TRIM3-212ENST00000533064 IFI27P40305 119 aaPredicted RBP10.1□□□□□ -0.79
TRIM3-212ENST00000533064 PYY3Q5JQD4 70 aa10.1□□□□□ -0.79
TRIM3-212ENST00000533064 FA2HQ7L5A8 372 aa10.1□□□□□ -0.79
TRIM3-212ENST00000533064 FAM19A2Q8N3H0 131 aa10.1□□□□□ -0.79
TRIM3-212ENST00000533064 NRACQ8N912 160 aa10.1□□□□□ -0.79
TRIM3-212ENST00000533064 ZNF479Q96JC4 524 aa10.1□□□□□ -0.79
TRIM3-212ENST00000533064 AP5S1Q9NUS5 200 aa10.1□□□□□ -0.79
TRIM3-212ENST00000533064 TRAV26-2A0A0B4J265 109 aa10.09□□□□□ -0.79
TRIM3-212ENST00000533064 TRGV4A0A0C4DH28 118 aa10.09□□□□□ -0.79
TRIM3-212ENST00000533064 LOC389332A0A1B0GUA5 103 aa10.09□□□□□ -0.79
TRIM3-212ENST00000533064 ATP5G1P05496 136 aa10.09□□□□□ -0.79
TRIM3-212ENST00000533064 GATA1P15976 413 aaPredicted RBP10.09□□□□□ -0.79
TRIM3-212ENST00000533064 LINC00315P59091 139 aa10.09□□□□□ -0.79
TRIM3-212ENST00000533064 STAB2Q8WWQ8 2551 aa10.09□□□□□ -0.79
TRIM3-212ENST00000533064 PRSS47A8MTI9 375 aa10.09□□□□□ -0.79
TRIM3-212ENST00000533064 JOSD1Q15040 202 aaPredicted RBP10.09□□□□□ -0.79
TRIM3-212ENST00000533064 H7C1H1 209 aa10.08□□□□□ -0.8
TRIM3-212ENST00000533064 PPP1R17O96001 155 aa10.08□□□□□ -0.8
TRIM3-212ENST00000533064 UFSP1Q6NVU6 142 aa10.08□□□□□ -0.8
TRIM3-212ENST00000533064 NXT2Q9NPJ8 142 aaKnown RBP10.08□□□□□ -0.8
TRIM3-212ENST00000533064 IGHV1-24A0A0C4DH33 117 aa10.07□□□□□ -0.8
TRIM3-212ENST00000533064 C12orf74Q32Q52 190 aa10.07□□□□□ -0.8
TRIM3-212ENST00000533064 LINC01546A6NGU7 62 aa10.06□□□□□ -0.8
TRIM3-212ENST00000533064 SUMO4Q6EEV6 95 aa10.06□□□□□ -0.8
TRIM3-212ENST00000533064 HTN3P15516 51 aa10.06□□□□□ -0.8
TRIM3-212ENST00000533064 NANOS2P60321 138 aaKnown RBP10.06□□□□□ -0.8
TRIM3-212ENST00000533064 PMCHL1Q16048 86 aa10.06□□□□□ -0.8
TRIM3-212ENST00000533064 Q8N8P6 123 aa10.06□□□□□ -0.8
TRIM3-212ENST00000533064 C20orf78Q9BR46 151 aa10.06□□□□□ -0.8
TRIM3-212ENST00000533064 F5H768 121 aa10.05□□□□□ -0.8
TRIM3-212ENST00000533064 FHL2Q14192 279 aa10.05□□□□□ -0.8
TRIM3-212ENST00000533064 Q6ZTC4 211 aa10.05□□□□□ -0.8
TRIM3-212ENST00000533064 IGLV2-18A0A075B6J9 118 aa10.04□□□□□ -0.8
TRIM3-212ENST00000533064 LINC00587B1AMM8 73 aa10.04□□□□□ -0.8
TRIM3-212ENST00000533064 K7EQD1 137 aa10.04□□□□□ -0.8
TRIM3-212ENST00000533064 SUMO2P61956 95 aaKnown RBP10.04□□□□□ -0.8
TRIM3-212ENST00000533064 RPL39LQ96EH5 51 aaKnown RBP10.04□□□□□ -0.8
TRIM3-212ENST00000533064 PRO0255Q9UI72 69 aa10.04□□□□□ -0.8
TRIM3-212ENST00000533064 HHLA3Q9XRX5 114 aa10.04□□□□□ -0.8
TRIM3-212ENST00000533064 FBN3Q75N90 2809 aa10.04□□□□□ -0.8
TRIM3-212ENST00000533064 TRBV6-4A0A1B0GX49 114 aa10.03□□□□□ -0.8
TRIM3-212ENST00000533064 LEPROTL1O95214 131 aa10.03□□□□□ -0.8
TRIM3-212ENST00000533064 KRTDAPP60985 99 aa10.03□□□□□ -0.8
TRIM3-212ENST00000533064 RHOHQ15669 191 aa10.03□□□□□ -0.8
TRIM3-212ENST00000533064 SLC25A29Q8N8R3 303 aa10.03□□□□□ -0.8
TRIM3-212ENST00000533064 PRADC1Q9BSG0 188 aa10.03□□□□□ -0.8
TRIM3-212ENST00000533064 SMIM2Q9BVW6 85 aa10.03□□□□□ -0.8
TRIM3-212ENST00000533064 EDA2RQ9HAV5 297 aa10.03□□□□□ -0.8
TRIM3-212ENST00000533064 NIT2Q9NQR4 276 aa10.03□□□□□ -0.8
TRIM3-212ENST00000533064 TGP01266 2768 aa10.03□□□□□ -0.8
TRIM3-212ENST00000533064 M0QY20 66 aa10.02□□□□□ -0.8
TRIM3-212ENST00000533064 A0A096LNJ9 63 aa10.02□□□□□ -0.81
TRIM3-212ENST00000533064 TRAV10A0A0B4J240 114 aa10.02□□□□□ -0.81
TRIM3-212ENST00000533064 TRBV10-1A0A0K0K1A3 114 aa10.02□□□□□ -0.81
TRIM3-212ENST00000533064 SCGB1D1O95968 90 aa10.02□□□□□ -0.81
TRIM3-212ENST00000533064 C3orf79P0CE67 100 aa10.02□□□□□ -0.81
TRIM3-212ENST00000533064 RPL32P62910 135 aaKnown RBP10.02□□□□□ -0.81
TRIM3-212ENST00000533064 Q6ZSN1 163 aa10.02□□□□□ -0.81
TRIM3-212ENST00000533064 HSPB8Q9UJY1 196 aa10.02□□□□□ -0.81
TRIM3-212ENST00000533064 DEFB131BA0A096LNP1 70 aa10.01□□□□□ -0.81
TRIM3-212ENST00000533064 TRBV6-5A0A0K0K1A5 114 aa10.01□□□□□ -0.81
TRIM3-212ENST00000533064 PAX4O43316 350 aa10.01□□□□□ -0.81
TRIM3-212ENST00000533064 HBDP02042 147 aa10.01□□□□□ -0.81
TRIM3-212ENST00000533064 CRYBA4P53673 196 aa10.01□□□□□ -0.81
TRIM3-212ENST00000533064 ST20Q9HBF5 79 aa10.01□□□□□ -0.81
TRIM3-212ENST00000533064 TNFRSF18Q9Y5U5 241 aa10.01□□□□□ -0.81
TRIM3-212ENST00000533064 K7EMI3 77 aa10□□□□□ -0.81
TRIM3-212ENST00000533064 FCER1GP30273 86 aa10□□□□□ -0.81
TRIM3-212ENST00000533064 RPL36AP83881 106 aaKnown RBP10□□□□□ -0.81
TRIM3-212ENST00000533064 CDPF1Q6NVV7 123 aa10□□□□□ -0.81
TRIM3-212ENST00000533064 RPL36ALQ969Q0 106 aaKnown RBP10□□□□□ -0.81
TRIM3-212ENST00000533064 DNAJC30Q96LL9 226 aa10□□□□□ -0.81
TRIM3-212ENST00000533064 TRAV26-1A0A087WT03 109 aa9.99□□□□□ -0.81
TRIM3-212ENST00000533064 P0DMU3 169 aa9.99□□□□□ -0.81
TRIM3-212ENST00000533064 FAM231AP0DMU4 169 aa9.99□□□□□ -0.81
TRIM3-212ENST00000533064 FAM231CP0DMU5 169 aa9.99□□□□□ -0.81
TRIM3-212ENST00000533064 LAGE3Q14657 143 aa9.99□□□□□ -0.81
TRIM3-212ENST00000533064 NEXN-AS1Q8NBZ9 246 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms