RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 LINC00315P59091 139 aa15.17■□□□□ 0.02
YBX1-203ENST00000436427 MRPL51Q4U2R6 128 aaKnown RBP15.17■□□□□ 0.02
YBX1-203ENST00000436427 PRELID3AQ96N28 172 aa15.17■□□□□ 0.02
YBX1-203ENST00000436427 HUWE1Q7Z6Z7 4374 aaKnown RBP15.17■□□□□ 0.02
YBX1-203ENST00000436427 TRAV26-2A0A0B4J265 109 aa15.16■□□□□ 0.02
YBX1-203ENST00000436427 LINC00614P0C842 121 aa15.16■□□□□ 0.02
YBX1-203ENST00000436427 CKS2P33552 79 aa15.16■□□□□ 0.02
YBX1-203ENST00000436427 UFSP1Q6NVU6 142 aa15.16■□□□□ 0.02
YBX1-203ENST00000436427 ZFP2Q6ZN57 461 aa15.16■□□□□ 0.02
YBX1-203ENST00000436427 D6R8Y8 96 aa15.15■□□□□ 0.02
YBX1-203ENST00000436427 C18orf15Q96N68 181 aa15.15■□□□□ 0.02
YBX1-203ENST00000436427 LAMTOR2Q9Y2Q5 125 aa15.15■□□□□ 0.02
YBX1-203ENST00000436427 DNAH9Q9NYC9 4486 aa15.15■□□□□ 0.02
YBX1-203ENST00000436427 SMKR1H3BMG3 65 aa15.14■□□□□ 0.01
YBX1-203ENST00000436427 NCR2O95944 276 aa15.14■□□□□ 0.01
YBX1-203ENST00000436427 FA2HQ7L5A8 372 aa15.14■□□□□ 0.01
YBX1-203ENST00000436427 SUMO4Q6EEV6 95 aa15.13■□□□□ 0.01
YBX1-203ENST00000436427 FAM19A2Q8N3H0 131 aa15.13■□□□□ 0.01
YBX1-203ENST00000436427 PRSS3P2Q8NHM4 247 aa15.13■□□□□ 0.01
YBX1-203ENST00000436427 PRKDCP78527 4128 aaKnown RBP15.13■□□□□ 0.01
YBX1-203ENST00000436427 TRGV4A0A0C4DH28 118 aa15.12■□□□□ 0.01
YBX1-203ENST00000436427 KRTDAPP60985 99 aa15.12■□□□□ 0.01
YBX1-203ENST00000436427 C12orf74Q32Q52 190 aa15.12■□□□□ 0.01
YBX1-203ENST00000436427 C11orf45Q8TAV5 145 aa15.12■□□□□ 0.01
YBX1-203ENST00000436427 MRAP2Q96G30 205 aa15.12■□□□□ 0.01
YBX1-203ENST00000436427 NACAE9PAV3 2078 aa15.12■□□□□ 0.01
YBX1-203ENST00000436427 CIDEAO60543 219 aa15.12■□□□□ 0.01
YBX1-203ENST00000436427 ATP5G1P05496 136 aa15.11■□□□□ 0.01
YBX1-203ENST00000436427 CDPF1Q6NVV7 123 aa15.11■□□□□ 0.01
YBX1-203ENST00000436427 Q6ZSN1 163 aa15.11■□□□□ 0.01
YBX1-203ENST00000436427 AP5S1Q9NUS5 200 aa15.11■□□□□ 0.01
YBX1-203ENST00000436427 TSTD3H0UI37 97 aa15.1■□□□□ 0.01
YBX1-203ENST00000436427 GAS8-AS1O95177 125 aa15.1■□□□□ 0.01
YBX1-203ENST00000436427 HTN3P15516 51 aa15.1■□□□□ 0.01
YBX1-203ENST00000436427 NANOS2P60321 138 aaKnown RBP15.1■□□□□ 0.01
YBX1-203ENST00000436427 URB1-AS1Q96HZ7 61 aa15.1■□□□□ 0.01
YBX1-203ENST00000436427 GATA1P15976 413 aaPredicted RBP15.09■□□□□ 0.01
YBX1-203ENST00000436427 FHL2Q14192 279 aa15.09■□□□□ 0.01
YBX1-203ENST00000436427 MAP1LC3AQ9H492 121 aa15.09■□□□□ 0.01
YBX1-203ENST00000436427 COL7A1Q02388 2944 aa15.09■□□□□ 0.01
YBX1-203ENST00000436427 PKIAP61925 76 aa15.08■□□□□ 0.01
YBX1-203ENST00000436427 Q6ZTC4 211 aa15.08■□□□□ 0.01
YBX1-203ENST00000436427 IGHV1-24A0A0C4DH33 117 aa15.07■□□□□ 0
YBX1-203ENST00000436427 H7C1H1 209 aa15.07■□□□□ 0
YBX1-203ENST00000436427 M0QY20 66 aa15.07■□□□□ 0
YBX1-203ENST00000436427 LEPROTL1O95214 131 aa15.07■□□□□ 0
YBX1-203ENST00000436427 SLC25A29Q8N8R3 303 aa15.07■□□□□ 0
YBX1-203ENST00000436427 RPL39LQ96EH5 51 aaKnown RBP15.07■□□□□ 0
YBX1-203ENST00000436427 HSPB8Q9UJY1 196 aa15.07■□□□□ 0
YBX1-203ENST00000436427 F5H768 121 aa15.06■□□□□ 0
YBX1-203ENST00000436427 K7EQD1 137 aa15.06■□□□□ 0
YBX1-203ENST00000436427 P0DMU3 169 aa15.06■□□□□ 0
YBX1-203ENST00000436427 FAM231AP0DMU4 169 aa15.06■□□□□ 0
YBX1-203ENST00000436427 FAM231CP0DMU5 169 aa15.06■□□□□ 0
YBX1-203ENST00000436427 HHLA3Q9XRX5 114 aa15.06■□□□□ 0
YBX1-203ENST00000436427 TNFRSF6BO95407 300 aa15.05■□□□□ -0
YBX1-203ENST00000436427 NPYP01303 97 aa15.05■□□□□ -0
YBX1-203ENST00000436427 C3orf79P0CE67 100 aa15.05■□□□□ -0
YBX1-203ENST00000436427 BTF3P20290 206 aaKnown RBP15.05■□□□□ -0
YBX1-203ENST00000436427 NRACQ8N912 160 aa15.05■□□□□ -0
YBX1-203ENST00000436427 LOC389332A0A1B0GUA5 103 aa15.04■□□□□ -0
YBX1-203ENST00000436427 TRBV6-4A0A1B0GX49 114 aa15.04■□□□□ -0
YBX1-203ENST00000436427 IFI27P40305 119 aaPredicted RBP15.04■□□□□ -0
YBX1-203ENST00000436427 EDA2RQ9HAV5 297 aa15.04■□□□□ -0
YBX1-203ENST00000436427 NXT2Q9NPJ8 142 aaKnown RBP15.04■□□□□ -0
YBX1-203ENST00000436427 PPP1R17O96001 155 aa15.03■□□□□ -0
YBX1-203ENST00000436427 PRO0255Q9UI72 69 aa15.03■□□□□ -0
YBX1-203ENST00000436427 C20orf202A1L168 122 aa15.02■□□□□ -0
YBX1-203ENST00000436427 RHOHQ15669 191 aa15.02■□□□□ -0
YBX1-203ENST00000436427 TEX43Q6ZNM6 134 aa15.02■□□□□ -0
YBX1-203ENST00000436427 TMEM70Q9BUB7 260 aa15.02■□□□□ -0
YBX1-203ENST00000436427 Q9UF83 564 aa15.02■□□□□ -0
YBX1-203ENST00000436427 CRYBA4P53673 196 aa15.02□□□□□ -0.01
YBX1-203ENST00000436427 PMCHL1Q16048 86 aa15.02□□□□□ -0.01
YBX1-203ENST00000436427 PRADC1Q9BSG0 188 aa15.02□□□□□ -0.01
YBX1-203ENST00000436427 NEXN-AS1Q8NBZ9 246 aa15.01□□□□□ -0.01
YBX1-203ENST00000436427 VAMP8Q9BV40 100 aa15.01□□□□□ -0.01
YBX1-203ENST00000436427 MAP1LC3CQ9BXW4 147 aa15.01□□□□□ -0.01
YBX1-203ENST00000436427 ST20Q9HBF5 79 aa15.01□□□□□ -0.01
YBX1-203ENST00000436427 TNFRSF18Q9Y5U5 241 aa15.01□□□□□ -0.01
YBX1-203ENST00000436427 FBN3Q75N90 2809 aa15.01□□□□□ -0.01
YBX1-203ENST00000436427 DEFB131BA0A096LNP1 70 aa15□□□□□ -0.01
YBX1-203ENST00000436427 A0A0J9YY99 117 aa15□□□□□ -0.01
YBX1-203ENST00000436427 TRBV10-1A0A0K0K1A3 114 aa15□□□□□ -0.01
YBX1-203ENST00000436427 PAX4O43316 350 aa15□□□□□ -0.01
YBX1-203ENST00000436427 TRAV26-1A0A087WT03 109 aa14.99□□□□□ -0.01
YBX1-203ENST00000436427 LOC100131303A0A0U1RQF7 123 aa14.99□□□□□ -0.01
YBX1-203ENST00000436427 SUMO2P61956 95 aaKnown RBP14.99□□□□□ -0.01
YBX1-203ENST00000436427 GAGE12JA6NER3 117 aa14.98□□□□□ -0.01
YBX1-203ENST00000436427 HBDP02042 147 aa14.98□□□□□ -0.01
YBX1-203ENST00000436427 RPL36AP83881 106 aaKnown RBP14.98□□□□□ -0.01
YBX1-203ENST00000436427 GAGE1Q13065 139 aa14.98□□□□□ -0.01
YBX1-203ENST00000436427 GAGE4Q13068 117 aa14.98□□□□□ -0.01
YBX1-203ENST00000436427 GAGE5Q13069 117 aa14.98□□□□□ -0.01
YBX1-203ENST00000436427 GAGE13Q4V321 117 aa14.98□□□□□ -0.01
YBX1-203ENST00000436427 ZNF664Q8N3J9 261 aa14.98□□□□□ -0.01
YBX1-203ENST00000436427 ZNRF2Q8NHG8 242 aa14.98□□□□□ -0.01
YBX1-203ENST00000436427 RPL36ALQ969Q0 106 aaKnown RBP14.98□□□□□ -0.01
YBX1-203ENST00000436427 DNAJC30Q96LL9 226 aa14.98□□□□□ -0.01
YBX1-203ENST00000436427 C20orf78Q9BR46 151 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms