RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 NTF3P20783 257 aa7.59□□□□□ -1.19
PAAF1-216ENST00000546039 SSTP61278 116 aa7.59□□□□□ -1.19
PAAF1-216ENST00000546039 SLAQ13239 276 aa7.59□□□□□ -1.19
PAAF1-216ENST00000546039 RIGQ13278 110 aa7.59□□□□□ -1.19
PAAF1-216ENST00000546039 TWIST1Q15672 202 aa7.59□□□□□ -1.19
PAAF1-216ENST00000546039 KCNIP4Q6PIL6 250 aa7.59□□□□□ -1.19
PAAF1-216ENST00000546039 SMIM15Q7Z3B0 74 aa7.59□□□□□ -1.19
PAAF1-216ENST00000546039 FAM210BQ96KR6 192 aa7.59□□□□□ -1.19
PAAF1-216ENST00000546039 JPT2Q9H910 190 aa7.59□□□□□ -1.19
PAAF1-216ENST00000546039 TRAV9-1A0A075B6T8 112 aa7.58□□□□□ -1.2
PAAF1-216ENST00000546039 A0A1B0GW15 77 aa7.58□□□□□ -1.2
PAAF1-216ENST00000546039 C3orf84H3BNL1 204 aa7.58□□□□□ -1.2
PAAF1-216ENST00000546039 CRYGDP07320 174 aa7.58□□□□□ -1.2
PAAF1-216ENST00000546039 HOXA5P20719 270 aa7.58□□□□□ -1.2
PAAF1-216ENST00000546039 S100PP25815 95 aa7.58□□□□□ -1.2
PAAF1-216ENST00000546039 FHL2Q14192 279 aa7.58□□□□□ -1.2
PAAF1-216ENST00000546039 FAM74A4Q5TZK3 123 aa7.58□□□□□ -1.2
PAAF1-216ENST00000546039 UFSP1Q6NVU6 142 aa7.58□□□□□ -1.2
PAAF1-216ENST00000546039 CEMP1Q6PRD7 247 aaPredicted RBP7.58□□□□□ -1.2
PAAF1-216ENST00000546039 ATP5L2Q7Z4Y8 100 aa7.58□□□□□ -1.2
PAAF1-216ENST00000546039 MSRB1Q9NZV6 116 aa7.58□□□□□ -1.2
PAAF1-216ENST00000546039 KLK5Q9Y337 293 aaPredicted RBP7.58□□□□□ -1.2
PAAF1-216ENST00000546039 A0A087WWL8 130 aa7.57□□□□□ -1.2
PAAF1-216ENST00000546039 S100A8P05109 93 aa7.57□□□□□ -1.2
PAAF1-216ENST00000546039 GATA1P15976 413 aaPredicted RBP7.57□□□□□ -1.2
PAAF1-216ENST00000546039 C14orf178Q8N769 122 aaPredicted RBP7.57□□□□□ -1.2
PAAF1-216ENST00000546039 SAMD10Q9BYL1 202 aa7.57□□□□□ -1.2
PAAF1-216ENST00000546039 DPH3P1Q9H4G8 78 aa7.57□□□□□ -1.2
PAAF1-216ENST00000546039 PRO0255Q9UI72 69 aa7.57□□□□□ -1.2
PAAF1-216ENST00000546039 IGHV3-73A0A0B4J1V6 119 aa7.56□□□□□ -1.2
PAAF1-216ENST00000546039 H3BNG1 76 aa7.56□□□□□ -1.2
PAAF1-216ENST00000546039 EVI2AP22794 236 aa7.56□□□□□ -1.2
PAAF1-216ENST00000546039 CRYBA4P53673 196 aa7.56□□□□□ -1.2
PAAF1-216ENST00000546039 FAM3BP58499 235 aaPredicted RBP7.56□□□□□ -1.2
PAAF1-216ENST00000546039 HBBP68871 147 aa7.56□□□□□ -1.2
PAAF1-216ENST00000546039 ZNF56Q15929 161 aa7.56□□□□□ -1.2
PAAF1-216ENST00000546039 ZFAND6Q6FIF0 208 aa7.56□□□□□ -1.2
PAAF1-216ENST00000546039 TMEM88Q6PEY1 159 aa7.56□□□□□ -1.2
PAAF1-216ENST00000546039 BTF3L4Q96K17 158 aa7.56□□□□□ -1.2
PAAF1-216ENST00000546039 HHLA3Q9XRX5 114 aa7.56□□□□□ -1.2
PAAF1-216ENST00000546039 KIF25-AS1Q9Y6Z4 181 aa7.56□□□□□ -1.2
PAAF1-216ENST00000546039 TRAV26-1A0A087WT03 109 aa7.55□□□□□ -1.2
PAAF1-216ENST00000546039 TRBV6-4A0A1B0GX49 114 aa7.55□□□□□ -1.2
PAAF1-216ENST00000546039 A0A1B0GXF2 115 aa7.55□□□□□ -1.2
PAAF1-216ENST00000546039 K7EQD1 137 aa7.55□□□□□ -1.2
PAAF1-216ENST00000546039 PAX4O43316 350 aa7.55□□□□□ -1.2
PAAF1-216ENST00000546039 MGPP08493 103 aa7.55□□□□□ -1.2
PAAF1-216ENST00000546039 TCTAP57738 103 aa7.55□□□□□ -1.2
PAAF1-216ENST00000546039 RAB4BP61018 213 aa7.55□□□□□ -1.2
PAAF1-216ENST00000546039 RHOHQ15669 191 aa7.55□□□□□ -1.2
PAAF1-216ENST00000546039 MRPL54Q6P161 138 aaKnown RBP7.55□□□□□ -1.2
PAAF1-216ENST00000546039 C15orf53Q8NAA6 179 aa7.55□□□□□ -1.2
PAAF1-216ENST00000546039 TMEM191AQ9H0A3 160 aa7.55□□□□□ -1.2
PAAF1-216ENST00000546039 CSMD3Q7Z407 3707 aa7.55□□□□□ -1.2
PAAF1-216ENST00000546039 IGLL5B9A064 214 aa7.54□□□□□ -1.2
PAAF1-216ENST00000546039 CAMPP49913 170 aa7.54□□□□□ -1.2
PAAF1-216ENST00000546039 LINC00315P59091 139 aa7.54□□□□□ -1.2
PAAF1-216ENST00000546039 RASL11AQ6T310 242 aa7.54□□□□□ -1.2
PAAF1-216ENST00000546039 ATRAIDQ6UW56 229 aa7.54□□□□□ -1.2
PAAF1-216ENST00000546039 GATD1Q8NB37 220 aa7.54□□□□□ -1.2
PAAF1-216ENST00000546039 VSIG2Q96IQ7 327 aa7.54□□□□□ -1.2
PAAF1-216ENST00000546039 PRADC1Q9BSG0 188 aa7.54□□□□□ -1.2
PAAF1-216ENST00000546039 URGCP-MRPS24S4R325 110 aa7.54□□□□□ -1.2
PAAF1-216ENST00000546039 A0A0J9YY99 117 aa7.53□□□□□ -1.2
PAAF1-216ENST00000546039 F5H697 171 aa7.53□□□□□ -1.2
PAAF1-216ENST00000546039 H7C1H1 209 aa7.53□□□□□ -1.2
PAAF1-216ENST00000546039 CASC10Q5T4H9 136 aa7.53□□□□□ -1.2
PAAF1-216ENST00000546039 SLC25A29Q8N8R3 303 aa7.53□□□□□ -1.2
PAAF1-216ENST00000546039 FRZBQ92765 325 aa7.53□□□□□ -1.2
PAAF1-216ENST00000546039 ICOSQ9Y6W8 199 aa7.53□□□□□ -1.2
PAAF1-216ENST00000546039 STARD9Q9P2P6 4700 aa7.53□□□□□ -1.2
PAAF1-216ENST00000546039 TRBV10-1A0A0K0K1A3 114 aa7.52□□□□□ -1.21
PAAF1-216ENST00000546039 GYPEP15421 78 aa7.52□□□□□ -1.21
PAAF1-216ENST00000546039 SUMO4Q6EEV6 95 aa7.52□□□□□ -1.21
PAAF1-216ENST00000546039 Q6ZSN1 163 aa7.52□□□□□ -1.21
PAAF1-216ENST00000546039 SMCO4Q9NRQ5 59 aa7.52□□□□□ -1.21
PAAF1-216ENST00000546039 DYNC2H1Q8NCM8 4307 aaKnown RBP7.51□□□□□ -1.21
PAAF1-216ENST00000546039 NUDT3O95989 172 aa7.51□□□□□ -1.21
PAAF1-216ENST00000546039 MRPL23Q16540 153 aaKnown RBP7.51□□□□□ -1.21
PAAF1-216ENST00000546039 COX19Q49B96 90 aa7.51□□□□□ -1.21
PAAF1-216ENST00000546039 FAM104BQ5XKR9 115 aa7.51□□□□□ -1.21
PAAF1-216ENST00000546039 SH2D6Q7Z4S9 175 aa7.51□□□□□ -1.21
PAAF1-216ENST00000546039 AMN1Q8IY45 258 aa7.51□□□□□ -1.21
PAAF1-216ENST00000546039 MRAP2Q96G30 205 aa7.51□□□□□ -1.21
PAAF1-216ENST00000546039 APLNQ9ULZ1 77 aa7.51□□□□□ -1.21
PAAF1-216ENST00000546039 TRBV24-1A0A075B6N3 115 aa7.5□□□□□ -1.21
PAAF1-216ENST00000546039 LOC100131303A0A0U1RQF7 123 aa7.5□□□□□ -1.21
PAAF1-216ENST00000546039 M0QY20 66 aa7.5□□□□□ -1.21
PAAF1-216ENST00000546039 RAB4AP20338 218 aa7.5□□□□□ -1.21
PAAF1-216ENST00000546039 SRIP30626 198 aa7.5□□□□□ -1.21
PAAF1-216ENST00000546039 RPL36AP83881 106 aaKnown RBP7.5□□□□□ -1.21
PAAF1-216ENST00000546039 ELOBQ15370 118 aa7.5□□□□□ -1.21
PAAF1-216ENST00000546039 RPL36ALQ969Q0 106 aaKnown RBP7.5□□□□□ -1.21
PAAF1-216ENST00000546039 RNF185Q96GF1 192 aa7.5□□□□□ -1.21
PAAF1-216ENST00000546039 DNAJC30Q96LL9 226 aa7.5□□□□□ -1.21
PAAF1-216ENST00000546039 TMA7Q9Y2S6 64 aaKnown RBP7.5□□□□□ -1.21
PAAF1-216ENST00000546039 A0A096LPF7 62 aa7.49□□□□□ -1.21
PAAF1-216ENST00000546039 LOC105371267A0A1B0GV96 52 aa7.49□□□□□ -1.21
PAAF1-216ENST00000546039 HLA-DQA1P01909 254 aa7.49□□□□□ -1.21
PAAF1-216ENST00000546039 P0DMU3 169 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms