RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 SPINK6Q6UWN8 80 aa3.23□□□□□ -1.89
PTPN4-209ENST00000469511 MCFD2Q8NI22 146 aa3.23□□□□□ -1.89
PTPN4-209ENST00000469511 ASB13Q8WXK3 278 aa3.23□□□□□ -1.89
PTPN4-209ENST00000469511 DIRAS2Q96HU8 199 aa3.23□□□□□ -1.89
PTPN4-209ENST00000469511 HYLS1Q96M11 299 aa3.23□□□□□ -1.89
PTPN4-209ENST00000469511 PFDN5Q99471 154 aa3.23□□□□□ -1.89
PTPN4-209ENST00000469511 GGACTQ9BVM4 153 aa3.23□□□□□ -1.89
PTPN4-209ENST00000469511 VCX3BQ9H321 246 aa3.23□□□□□ -1.89
PTPN4-209ENST00000469511 SDF2L1Q9HCN8 221 aa3.23□□□□□ -1.89
PTPN4-209ENST00000469511 GSKIPQ9P0R6 139 aa3.23□□□□□ -1.89
PTPN4-209ENST00000469511 IGHV3-64A0A075B6Q5 118 aa3.22□□□□□ -1.89
PTPN4-209ENST00000469511 A0A087WWC5 75 aa3.22□□□□□ -1.89
PTPN4-209ENST00000469511 TRAV21A0A0B4J279 112 aa3.22□□□□□ -1.89
PTPN4-209ENST00000469511 IGSF23A1L1A6 192 aa3.22□□□□□ -1.89
PTPN4-209ENST00000469511 RBAKDNA6NC62 111 aa3.22□□□□□ -1.89
PTPN4-209ENST00000469511 TMEM262E9PQX1 116 aa3.22□□□□□ -1.89
PTPN4-209ENST00000469511 CCSO14618 274 aa3.22□□□□□ -1.89
PTPN4-209ENST00000469511 ANGP03950 147 aaKnown RBP3.22□□□□□ -1.89
PTPN4-209ENST00000469511 SNRPEP62304 92 aaKnown RBP3.22□□□□□ -1.89
PTPN4-209ENST00000469511 COX6A2Q02221 97 aa3.22□□□□□ -1.89
PTPN4-209ENST00000469511 BAXQ07812 192 aa3.22□□□□□ -1.89
PTPN4-209ENST00000469511 Q0VG73 95 aa3.22□□□□□ -1.89
PTPN4-209ENST00000469511 IAH1Q2TAA2 248 aaPredicted RBP3.22□□□□□ -1.89
PTPN4-209ENST00000469511 MAJINQ3KP22 176 aa3.22□□□□□ -1.89
PTPN4-209ENST00000469511 REG3GQ6UW15 175 aa3.22□□□□□ -1.89
PTPN4-209ENST00000469511 NTM-AS1Q6ZSK4 140 aa3.22□□□□□ -1.89
PTPN4-209ENST00000469511 C12orf45Q8N5I9 185 aaPredicted RBP3.22□□□□□ -1.89
PTPN4-209ENST00000469511 C15orf40Q8WUR7 153 aa3.22□□□□□ -1.89
PTPN4-209ENST00000469511 LSM5Q9Y4Y9 91 aaKnown RBP3.22□□□□□ -1.89
PTPN4-209ENST00000469511 IGKV3D-20A0A0C4DH25 116 aa3.21□□□□□ -1.9
PTPN4-209ENST00000469511 A0A0U1RQV1 116 aa3.21□□□□□ -1.9
PTPN4-209ENST00000469511 PGPA6NDG6 321 aa3.21□□□□□ -1.9
PTPN4-209ENST00000469511 CIDEAO60543 219 aa3.21□□□□□ -1.9
PTPN4-209ENST00000469511 FGF7P21781 194 aa3.21□□□□□ -1.9
PTPN4-209ENST00000469511 RAB5CP51148 216 aa3.21□□□□□ -1.9
PTPN4-209ENST00000469511 BCAP31P51572 246 aa3.21□□□□□ -1.9
PTPN4-209ENST00000469511 TAS2R30P59541 319 aa3.21□□□□□ -1.9
PTPN4-209ENST00000469511 CNBPP62633 177 aaKnown RBP3.21□□□□□ -1.9
PTPN4-209ENST00000469511 PRR4Q16378 134 aa3.21□□□□□ -1.9
PTPN4-209ENST00000469511 LGALSLQ3ZCW2 172 aaPredicted RBP3.21□□□□□ -1.9
PTPN4-209ENST00000469511 GOLT1AQ6ZVE7 132 aa3.21□□□□□ -1.9
PTPN4-209ENST00000469511 LINC00269Q8N2A0 174 aa3.21□□□□□ -1.9
PTPN4-209ENST00000469511 STPG4Q8N801 248 aa3.21□□□□□ -1.9
PTPN4-209ENST00000469511 OR10G7Q8NGN6 311 aa3.21□□□□□ -1.9
PTPN4-209ENST00000469511 OR2G3Q8NGZ4 309 aa3.21□□□□□ -1.9
PTPN4-209ENST00000469511 C7orf33Q8WU49 177 aa3.21□□□□□ -1.9
PTPN4-209ENST00000469511 AP3S1Q92572 193 aa3.21□□□□□ -1.9
PTPN4-209ENST00000469511 PTH2Q96A98 100 aa3.21□□□□□ -1.9
PTPN4-209ENST00000469511 RNF185Q96GF1 192 aa3.21□□□□□ -1.9
PTPN4-209ENST00000469511 GFRA4Q9GZZ7 299 aa3.21□□□□□ -1.9
PTPN4-209ENST00000469511 TREM1Q9NP99 234 aa3.21□□□□□ -1.9
PTPN4-209ENST00000469511 UQCC1Q9NVA1 299 aa3.21□□□□□ -1.9
PTPN4-209ENST00000469511 VAX2Q9UIW0 290 aa3.21□□□□□ -1.9
PTPN4-209ENST00000469511 LENEPQ9Y5L5 61 aa3.21□□□□□ -1.9
PTPN4-209ENST00000469511 A0A087WXM4 84 aa3.2□□□□□ -1.9
PTPN4-209ENST00000469511 A0A096LNI7 61 aa3.2□□□□□ -1.9
PTPN4-209ENST00000469511 ATP6V1G2O95670 118 aa3.2□□□□□ -1.9
PTPN4-209ENST00000469511 CRPP02741 224 aa3.2□□□□□ -1.9
PTPN4-209ENST00000469511 TCRBP04435 133 aa3.2□□□□□ -1.9
PTPN4-209ENST00000469511 CSN1S1P47710 185 aa3.2□□□□□ -1.9
PTPN4-209ENST00000469511 UBE2D3P61077 147 aa3.2□□□□□ -1.9
PTPN4-209ENST00000469511 UBE2D2P62837 147 aa3.2□□□□□ -1.9
PTPN4-209ENST00000469511 RBX1P62877 108 aa3.2□□□□□ -1.9
PTPN4-209ENST00000469511 ELOBQ15370 118 aa3.2□□□□□ -1.9
PTPN4-209ENST00000469511 FAM74A4Q5TZK3 123 aa3.2□□□□□ -1.9
PTPN4-209ENST00000469511 CST9LP1Q5W188 147 aa3.2□□□□□ -1.9
PTPN4-209ENST00000469511 ZFP2Q6ZN57 461 aa3.2□□□□□ -1.9
PTPN4-209ENST00000469511 INO80EQ8NBZ0 244 aaPredicted RBP3.2□□□□□ -1.9
PTPN4-209ENST00000469511 OR10G9Q8NGN4 311 aa3.2□□□□□ -1.9
PTPN4-209ENST00000469511 KCNS1Q96KK3 526 aa3.2□□□□□ -1.9
PTPN4-209ENST00000469511 CHCHD7Q9BUK0 85 aa3.2□□□□□ -1.9
PTPN4-209ENST00000469511 NPCDR1Q9BY65 106 aa3.2□□□□□ -1.9
PTPN4-209ENST00000469511 Q9H521 79 aa3.2□□□□□ -1.9
PTPN4-209ENST00000469511 PRR34Q9NV39 138 aa3.2□□□□□ -1.9
PTPN4-209ENST00000469511 MUC17Q685J3 4493 aa3.2□□□□□ -1.9
PTPN4-209ENST00000469511 TRBV6-8A0A0A6YYG3 113 aa3.19□□□□□ -1.9
PTPN4-209ENST00000469511 PIGBOS1A0A0B4J2F0 54 aa3.19□□□□□ -1.9
PTPN4-209ENST00000469511 A8MWV9 139 aa3.19□□□□□ -1.9
PTPN4-209ENST00000469511 L7N2F9 121 aa3.19□□□□□ -1.9
PTPN4-209ENST00000469511 OR7C2O60412 319 aa3.19□□□□□ -1.9
PTPN4-209ENST00000469511 GCGP01275 180 aa3.19□□□□□ -1.9
PTPN4-209ENST00000469511 SEC11BP0C7V7 166 aa3.19□□□□□ -1.9
PTPN4-209ENST00000469511 FGF8P55075 233 aaPredicted RBP3.19□□□□□ -1.9
PTPN4-209ENST00000469511 GAGE6Q13070 117 aa3.19□□□□□ -1.9
PTPN4-209ENST00000469511 MIAQ16674 131 aa3.19□□□□□ -1.9
PTPN4-209ENST00000469511 SPANXN2Q5MJ10 180 aa3.19□□□□□ -1.9
PTPN4-209ENST00000469511 TOMM5Q8N4H5 51 aa3.19□□□□□ -1.9
PTPN4-209ENST00000469511 TMEM252Q8N6L7 170 aa3.19□□□□□ -1.9
PTPN4-209ENST00000469511 C15orf56Q8N910 161 aa3.19□□□□□ -1.9
PTPN4-209ENST00000469511 DYNC2LI1Q8TCX1 351 aa3.19□□□□□ -1.9
PTPN4-209ENST00000469511 ATP5SQ99766 215 aa3.19□□□□□ -1.9
PTPN4-209ENST00000469511 SLC25A21Q9BQT8 299 aaPredicted RBP3.19□□□□□ -1.9
PTPN4-209ENST00000469511 NMES1Q9C002 83 aa3.19□□□□□ -1.9
PTPN4-209ENST00000469511 GRIFINA4D1Z8 144 aa3.18□□□□□ -1.9
PTPN4-209ENST00000469511 HMGB3O15347 200 aaKnown RBP3.18□□□□□ -1.9
PTPN4-209ENST00000469511 PTTG1O95997 202 aa3.18□□□□□ -1.9
PTPN4-209ENST00000469511 SMIM18P0DKX4 95 aa3.18□□□□□ -1.9
PTPN4-209ENST00000469511 SULT1A1P50225 295 aa3.18□□□□□ -1.9
PTPN4-209ENST00000469511 UBE2L3P68036 154 aaKnown RBP3.18□□□□□ -1.9
PTPN4-209ENST00000469511 PNRC1Q12796 327 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms