RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 SLC25A29Q8N8R3 303 aa3.01□□□□□ -1.93
SFXN1-202ENST00000421887 LYPD6BQ8NI32 183 aa3.01□□□□□ -1.93
SFXN1-202ENST00000421887 YIPF6Q96EC8 236 aa3.01□□□□□ -1.93
SFXN1-202ENST00000421887 LINC00477Q96M19 166 aa3.01□□□□□ -1.93
SFXN1-202ENST00000421887 TXNL4BQ9NX01 149 aaKnown RBP3.01□□□□□ -1.93
SFXN1-202ENST00000421887 ANAPC10Q9UM13 185 aa3.01□□□□□ -1.93
SFXN1-202ENST00000421887 C14orf166Q9Y224 244 aaKnown RBP3.01□□□□□ -1.93
SFXN1-202ENST00000421887 A0A087WWC5 75 aa3□□□□□ -1.93
SFXN1-202ENST00000421887 TRAV16A0A0A6YYK6 109 aaPredicted RBP3□□□□□ -1.93
SFXN1-202ENST00000421887 LOC100506127A0A0U1RQW1 187 aa3□□□□□ -1.93
SFXN1-202ENST00000421887 SMIM31A0A1B0GVY4 71 aa3□□□□□ -1.93
SFXN1-202ENST00000421887 TRBV6-4A0A1B0GX49 114 aa3□□□□□ -1.93
SFXN1-202ENST00000421887 NMBP08949 121 aa3□□□□□ -1.93
SFXN1-202ENST00000421887 SDC2P34741 201 aa3□□□□□ -1.93
SFXN1-202ENST00000421887 CCR6P51684 374 aa3□□□□□ -1.93
SFXN1-202ENST00000421887 CXCL6P80162 114 aa3□□□□□ -1.93
SFXN1-202ENST00000421887 SMCO1Q147U7 214 aa3□□□□□ -1.93
SFXN1-202ENST00000421887 GUK1Q16774 197 aa3□□□□□ -1.93
SFXN1-202ENST00000421887 RNASE10Q5GAN6 216 aaKnown RBP3□□□□□ -1.93
SFXN1-202ENST00000421887 UBE2NLQ5JXB2 153 aa3□□□□□ -1.93
SFXN1-202ENST00000421887 TMEM78Q5T7P6 136 aa3□□□□□ -1.93
SFXN1-202ENST00000421887 SDIM1Q6ZPB5 146 aa3□□□□□ -1.93
SFXN1-202ENST00000421887 CYP2G1PQ6ZSU1 146 aa3□□□□□ -1.93
SFXN1-202ENST00000421887 LINC00305Q7Z4B0 112 aa3□□□□□ -1.93
SFXN1-202ENST00000421887 SELENOHQ8IZQ5 122 aaKnown RBP3□□□□□ -1.93
SFXN1-202ENST00000421887 ZNF664Q8N3J9 261 aa3□□□□□ -1.93
SFXN1-202ENST00000421887 INO80EQ8NBZ0 244 aaPredicted RBP3□□□□□ -1.93
SFXN1-202ENST00000421887 LHFPL5Q8TAF8 219 aa3□□□□□ -1.93
SFXN1-202ENST00000421887 CHCHD10Q8WYQ3 142 aaPredicted RBP3□□□□□ -1.93
SFXN1-202ENST00000421887 ACTR3CQ9C0K3 210 aaPredicted RBP3□□□□□ -1.93
SFXN1-202ENST00000421887 ARL6Q9H0F7 186 aa3□□□□□ -1.93
SFXN1-202ENST00000421887 ARV1Q9H2C2 271 aa3□□□□□ -1.93
SFXN1-202ENST00000421887 VCXQ9H320 206 aa3□□□□□ -1.93
SFXN1-202ENST00000421887 FAT4Q6V0I7 4981 aa2.99□□□□□ -1.93
SFXN1-202ENST00000421887 IGHV3-64A0A075B6Q5 118 aa2.99□□□□□ -1.93
SFXN1-202ENST00000421887 ANKRD65E5RJM6 399 aa2.99□□□□□ -1.93
SFXN1-202ENST00000421887 M0R2P5 195 aa2.99□□□□□ -1.93
SFXN1-202ENST00000421887 SLC17A3O00476 420 aa2.99□□□□□ -1.93
SFXN1-202ENST00000421887 HSBP1O75506 76 aa2.99□□□□□ -1.93
SFXN1-202ENST00000421887 HIST1H1EP10412 219 aaKnown RBP2.99□□□□□ -1.93
SFXN1-202ENST00000421887 UBE2MP61081 183 aaKnown RBP2.99□□□□□ -1.93
SFXN1-202ENST00000421887 ERCC8Q13216 396 aa2.99□□□□□ -1.93
SFXN1-202ENST00000421887 TMEM183BQ1AE95 376 aa2.99□□□□□ -1.93
SFXN1-202ENST00000421887 SCGB2B2Q4G0G5 96 aa2.99□□□□□ -1.93
SFXN1-202ENST00000421887 NIT1Q86X76 327 aa2.99□□□□□ -1.93
SFXN1-202ENST00000421887 TMEM183AQ8IXX5 376 aa2.99□□□□□ -1.93
SFXN1-202ENST00000421887 TMEM252Q8N6L7 170 aa2.99□□□□□ -1.93
SFXN1-202ENST00000421887 OR13C8Q8NGS7 320 aa2.99□□□□□ -1.93
SFXN1-202ENST00000421887 Q8TAT8 98 aa2.99□□□□□ -1.93
SFXN1-202ENST00000421887 CIB3Q96Q77 187 aaPredicted RBP2.99□□□□□ -1.93
SFXN1-202ENST00000421887 SOSTQ9BQB4 213 aa2.99□□□□□ -1.93
SFXN1-202ENST00000421887 CCDC59Q9P031 241 aaKnown RBP2.99□□□□□ -1.93
SFXN1-202ENST00000421887 PSORS1C2Q9UIG4 136 aa2.99□□□□□ -1.93
SFXN1-202ENST00000421887 IGLV8-61A0A075B6I0 122 aa2.98□□□□□ -1.93
SFXN1-202ENST00000421887 PIGBOS1A0A0B4J2F0 54 aa2.98□□□□□ -1.93
SFXN1-202ENST00000421887 COX7A2P2O60397 106 aa2.98□□□□□ -1.93
SFXN1-202ENST00000421887 MED6O75586 246 aa2.98□□□□□ -1.93
SFXN1-202ENST00000421887 APOA1P02647 267 aa2.98□□□□□ -1.93
SFXN1-202ENST00000421887 MGST1P10620 155 aaKnown RBP2.98□□□□□ -1.93
SFXN1-202ENST00000421887 IAPPP10997 89 aa2.98□□□□□ -1.93
SFXN1-202ENST00000421887 CRISP2P16562 243 aa2.98□□□□□ -1.93
SFXN1-202ENST00000421887 CIRBPQ14011 172 aaKnown RBP2.98□□□□□ -1.93
SFXN1-202ENST00000421887 SNX29P2Q8IUI4 249 aa2.98□□□□□ -1.93
SFXN1-202ENST00000421887 CYB561D1Q8N8Q1 229 aa2.98□□□□□ -1.93
SFXN1-202ENST00000421887 OR51S1Q8NGJ8 323 aa2.98□□□□□ -1.93
SFXN1-202ENST00000421887 TERB2Q8NHR7 220 aa2.98□□□□□ -1.93
SFXN1-202ENST00000421887 SPACA4Q8TDM5 124 aa2.98□□□□□ -1.93
SFXN1-202ENST00000421887 DNAJC30Q96LL9 226 aa2.98□□□□□ -1.93
SFXN1-202ENST00000421887 CHCHD7Q9BUK0 85 aa2.98□□□□□ -1.93
SFXN1-202ENST00000421887 AGPAT4-IT1Q9H0P7 198 aa2.98□□□□□ -1.93
SFXN1-202ENST00000421887 DUSP21Q9H596 190 aa2.98□□□□□ -1.93
SFXN1-202ENST00000421887 NAA60Q9H7X0 242 aa2.98□□□□□ -1.93
SFXN1-202ENST00000421887 NAGKQ9UJ70 344 aa2.98□□□□□ -1.93
SFXN1-202ENST00000421887 FLVCR2Q9UPI3 526 aa2.98□□□□□ -1.93
SFXN1-202ENST00000421887 DNAH8Q96JB1 4490 aa2.98□□□□□ -1.93
SFXN1-202ENST00000421887 IGHV3-73A0A0B4J1V6 119 aa2.97□□□□□ -1.93
SFXN1-202ENST00000421887 TMEM262E9PQX1 116 aa2.97□□□□□ -1.93
SFXN1-202ENST00000421887 AGPAT2O15120 278 aa2.97□□□□□ -1.93
SFXN1-202ENST00000421887 MRPS12O15235 138 aaKnown RBP2.97□□□□□ -1.93
SFXN1-202ENST00000421887 EIF3GO75821 320 aaKnown RBP eCLIP2.97□□□□□ -1.93
SFXN1-202ENST00000421887 SNAPINO95295 136 aa2.97□□□□□ -1.93
SFXN1-202ENST00000421887 CHTF8P0CG12 524 aa2.97□□□□□ -1.93
SFXN1-202ENST00000421887 INPP1P49441 399 aa2.97□□□□□ -1.93
SFXN1-202ENST00000421887 FGF8P55075 233 aaPredicted RBP2.97□□□□□ -1.93
SFXN1-202ENST00000421887 SPANXN5Q5MJ07 72 aa2.97□□□□□ -1.93
SFXN1-202ENST00000421887 C10orf113Q5VZT2 155 aa2.97□□□□□ -1.93
SFXN1-202ENST00000421887 LHFPL1Q86WI0 220 aa2.97□□□□□ -1.93
SFXN1-202ENST00000421887 TMEM75Q8N9X5 138 aa2.97□□□□□ -1.93
SFXN1-202ENST00000421887 FAM19A4Q96LR4 140 aa2.97□□□□□ -1.93
SFXN1-202ENST00000421887 KIR2DL4Q99706 377 aa2.97□□□□□ -1.93
SFXN1-202ENST00000421887 C20orf85Q9H1P6 137 aa2.97□□□□□ -1.93
SFXN1-202ENST00000421887 PLAC8Q9NZF1 115 aa2.97□□□□□ -1.93
SFXN1-202ENST00000421887 PRELID1Q9Y255 219 aa2.97□□□□□ -1.93
SFXN1-202ENST00000421887 TIMM9Q9Y5J7 89 aa2.97□□□□□ -1.93
SFXN1-202ENST00000421887 TRAV6A0A075B6T7 132 aa2.96□□□□□ -1.94
SFXN1-202ENST00000421887 A0A0B4J2A0 478 aa2.96□□□□□ -1.94
SFXN1-202ENST00000421887 H3BQ15 152 aa2.96□□□□□ -1.94
SFXN1-202ENST00000421887 M0R3E3 92 aa2.96□□□□□ -1.94
SFXN1-202ENST00000421887 IFNA7P01567 189 aa2.96□□□□□ -1.94
SFXN1-202ENST00000421887 ANGP03950 147 aaKnown RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms