RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 C1orf122Q6ZSJ8 110 aa10.75□□□□□ -0.69
GPC1-208ENST00000469694 MAP1LC3AQ9H492 121 aa10.75□□□□□ -0.69
GPC1-208ENST00000469694 AGRNO00468 2067 aa10.74□□□□□ -0.69
GPC1-208ENST00000469694 NBPF19A0A087WUL8 3843 aa10.74□□□□□ -0.69
GPC1-208ENST00000469694 LYPD1Q8N2G4 141 aa10.74□□□□□ -0.69
GPC1-208ENST00000469694 AJUBAQ96IF1 538 aa10.74□□□□□ -0.69
GPC1-208ENST00000469694 FOXC2Q99958 501 aa10.74□□□□□ -0.69
GPC1-208ENST00000469694 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.74□□□□□ -0.69
GPC1-208ENST00000469694 OR11H12B2RN74 326 aa10.74□□□□□ -0.69
GPC1-208ENST00000469694 PPIFP30405 207 aaKnown RBP10.74□□□□□ -0.69
GPC1-208ENST00000469694 NDPQ00604 133 aa10.74□□□□□ -0.69
GPC1-208ENST00000469694 TWIST1Q15672 202 aa10.74□□□□□ -0.69
GPC1-208ENST00000469694 LINC01559Q495D7 138 aa10.74□□□□□ -0.69
GPC1-208ENST00000469694 OR11H1Q8NG94 326 aa10.74□□□□□ -0.69
GPC1-208ENST00000469694 OR11H2Q8NH07 326 aa10.74□□□□□ -0.69
GPC1-208ENST00000469694 ATP6V0E2Q8NHE4 81 aa10.74□□□□□ -0.69
GPC1-208ENST00000469694 C1QTNF4Q9BXJ3 329 aa10.74□□□□□ -0.69
GPC1-208ENST00000469694 TENM4Q6N022 2769 aa10.73□□□□□ -0.69
GPC1-208ENST00000469694 SH2D1AO60880 128 aa10.73□□□□□ -0.69
GPC1-208ENST00000469694 ATP5LO75964 103 aa10.73□□□□□ -0.69
GPC1-208ENST00000469694 MT-ATP8P03928 68 aa10.73□□□□□ -0.69
GPC1-208ENST00000469694 BRD3OSQ6XYD6 125 aa10.73□□□□□ -0.69
GPC1-208ENST00000469694 C10orf105Q8TEF2 133 aa10.73□□□□□ -0.69
GPC1-208ENST00000469694 HIST1H4GQ99525 98 aa10.73□□□□□ -0.69
GPC1-208ENST00000469694 TMEM160Q9NX00 188 aa10.73□□□□□ -0.69
GPC1-208ENST00000469694 NAV2Q8IVL1 2488 aa10.72□□□□□ -0.69
GPC1-208ENST00000469694 TRAV40A0A0B4J280 105 aa10.72□□□□□ -0.69
GPC1-208ENST00000469694 M0R3E3 92 aa10.72□□□□□ -0.69
GPC1-208ENST00000469694 RNF185Q96GF1 192 aa10.72□□□□□ -0.69
GPC1-208ENST00000469694 PIMREGQ9BSJ6 248 aa10.72□□□□□ -0.69
GPC1-208ENST00000469694 CSPG4Q6UVK1 2322 aa10.72□□□□□ -0.69
GPC1-208ENST00000469694 NXT2Q9NPJ8 142 aaKnown RBP10.72□□□□□ -0.69
GPC1-208ENST00000469694 ERG28Q9UKR5 140 aa10.72□□□□□ -0.69
GPC1-208ENST00000469694 CENPVL3A0A0U1RRI6 287 aa10.71□□□□□ -0.69
GPC1-208ENST00000469694 GAS8-AS1O95177 125 aa10.71□□□□□ -0.69
GPC1-208ENST00000469694 GATA3P23771 443 aa10.71□□□□□ -0.69
GPC1-208ENST00000469694 SMCPP49901 116 aaPredicted RBP10.71□□□□□ -0.69
GPC1-208ENST00000469694 UBE2E1P51965 193 aa10.71□□□□□ -0.69
GPC1-208ENST00000469694 CFAP126Q5VTH2 177 aa10.71□□□□□ -0.69
GPC1-208ENST00000469694 LCNL1Q6ZST4 164 aa10.71□□□□□ -0.69
GPC1-208ENST00000469694 Q6ZUT4 128 aa10.71□□□□□ -0.69
GPC1-208ENST00000469694 NFE4Q86UQ8 179 aa10.71□□□□□ -0.69
GPC1-208ENST00000469694 TMEM158Q8WZ71 300 aa10.71□□□□□ -0.69
GPC1-208ENST00000469694 RNF183Q96D59 192 aa10.71□□□□□ -0.69
GPC1-208ENST00000469694 RNF5Q99942 180 aa10.71□□□□□ -0.69
GPC1-208ENST00000469694 SHANK2-AS3Q9BTD1 123 aa10.71□□□□□ -0.69
GPC1-208ENST00000469694 TRBV7-3A0A075B6L6 115 aa10.71□□□□□ -0.69
GPC1-208ENST00000469694 NDUFA3O95167 84 aa10.71□□□□□ -0.69
GPC1-208ENST00000469694 XGP55808 180 aa10.71□□□□□ -0.69
GPC1-208ENST00000469694 FHL3Q13643 280 aa10.71□□□□□ -0.69
GPC1-208ENST00000469694 NPBQ8NG41 125 aa10.71□□□□□ -0.69
GPC1-208ENST00000469694 MORN3Q6PF18 240 aaPredicted RBP10.71□□□□□ -0.7
GPC1-208ENST00000469694 MAPK1IP1LQ8NDC0 245 aa10.71□□□□□ -0.7
GPC1-208ENST00000469694 MRPL35Q9NZE8 188 aaKnown RBP10.71□□□□□ -0.7
GPC1-208ENST00000469694 KRTAP10-9P60411 292 aa10.7□□□□□ -0.7
GPC1-208ENST00000469694 MINOS1Q5TGZ0 78 aa10.7□□□□□ -0.7
GPC1-208ENST00000469694 RASL11BQ9BPW5 248 aa10.7□□□□□ -0.7
GPC1-208ENST00000469694 MINOS1-NBL1R4GNA1 71 aa10.7□□□□□ -0.7
GPC1-208ENST00000469694 TNFRSF6BO95407 300 aa10.7□□□□□ -0.7
GPC1-208ENST00000469694 EGR2P11161 476 aaPredicted RBP10.7□□□□□ -0.7
GPC1-208ENST00000469694 H3BRN7 92 aa10.69□□□□□ -0.7
GPC1-208ENST00000469694 NPFFO15130 113 aa10.69□□□□□ -0.7
GPC1-208ENST00000469694 MRPS12O15235 138 aaKnown RBP10.69□□□□□ -0.7
GPC1-208ENST00000469694 IGKV1-17P01599 117 aa10.69□□□□□ -0.7
GPC1-208ENST00000469694 IGLC6P0CF74 106 aa10.69□□□□□ -0.7
GPC1-208ENST00000469694 Q8N6K4 173 aa10.69□□□□□ -0.7
GPC1-208ENST00000469694 MSRB1Q9NZV6 116 aa10.69□□□□□ -0.7
GPC1-208ENST00000469694 COX8CQ7Z4L0 72 aa10.69□□□□□ -0.7
GPC1-208ENST00000469694 TMEM219Q86XT9 240 aa10.69□□□□□ -0.7
GPC1-208ENST00000469694 LINC01619G3V211 115 aa10.68□□□□□ -0.7
GPC1-208ENST00000469694 I3L2K1 104 aa10.68□□□□□ -0.7
GPC1-208ENST00000469694 HOXA3O43365 443 aaPredicted RBP10.68□□□□□ -0.7
GPC1-208ENST00000469694 ZNF575Q86XF7 245 aa10.68□□□□□ -0.7
GPC1-208ENST00000469694 IGHV3-23P01764 117 aa10.68□□□□□ -0.7
GPC1-208ENST00000469694 IGHV4-38-2P0DP08 117 aa10.68□□□□□ -0.7
GPC1-208ENST00000469694 COX6B1P14854 86 aa10.68□□□□□ -0.7
GPC1-208ENST00000469694 GLMPQ8WWB7 406 aa10.68□□□□□ -0.7
GPC1-208ENST00000469694 LINC01548A6NM66 108 aa10.67□□□□□ -0.7
GPC1-208ENST00000469694 Q8N9W7 124 aa10.67□□□□□ -0.7
GPC1-208ENST00000469694 DLX4Q92988 240 aaPredicted RBP10.67□□□□□ -0.7
GPC1-208ENST00000469694 APCP25054 2843 aa10.67□□□□□ -0.7
GPC1-208ENST00000469694 K7EIM0 57 aa10.67□□□□□ -0.7
GPC1-208ENST00000469694 PGPEP1Q9NXJ5 209 aa10.67□□□□□ -0.7
GPC1-208ENST00000469694 SS18L2Q9UHA2 77 aa10.67□□□□□ -0.7
GPC1-208ENST00000469694 Q8N8P6 123 aa10.67□□□□□ -0.7
GPC1-208ENST00000469694 DOPEY2Q9Y3R5 2298 aa10.67□□□□□ -0.7
GPC1-208ENST00000469694 IGLV2-18A0A075B6J9 118 aa10.66□□□□□ -0.7
GPC1-208ENST00000469694 IGHV7-81A0A0B4J1V7 117 aa10.66□□□□□ -0.7
GPC1-208ENST00000469694 CFAP161Q6P656 301 aa10.66□□□□□ -0.7
GPC1-208ENST00000469694 PRR25Q96S07 402 aa10.66□□□□□ -0.7
GPC1-208ENST00000469694 AAMDCQ9H7C9 122 aa10.66□□□□□ -0.7
GPC1-208ENST00000469694 ZNF469Q96JG9 3925 aaPredicted RBP10.66□□□□□ -0.7
GPC1-208ENST00000469694 IGHV3OR16-8A0A075B7F1 116 aa10.66□□□□□ -0.7
GPC1-208ENST00000469694 A0A087WX48 190 aa10.66□□□□□ -0.7
GPC1-208ENST00000469694 OOSP1A8MZH6 123 aa10.66□□□□□ -0.7
GPC1-208ENST00000469694 GATA1P15976 413 aaPredicted RBP10.66□□□□□ -0.7
GPC1-208ENST00000469694 EBI3Q14213 229 aa10.66□□□□□ -0.7
GPC1-208ENST00000469694 ZNF491Q8N8L2 437 aa10.66□□□□□ -0.7
GPC1-208ENST00000469694 MYOZ3Q8TDC0 251 aa10.66□□□□□ -0.7
GPC1-208ENST00000469694 CNFNQ9BYD5 112 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms